RID=1168937271-30846-84686853757.BLASTQ1, Contig187

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937271-30846-84686853757.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig187
Length=567

Distribution of 18 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|15238266|ref|NP_196087.1|  unknown protein [Arabidopsis tha...   157    2e-46 
gi|15233866|ref|NP_194988.1|  nucleic acid binding [Arabidopsi...   122    7e-29 
gi|115443601|ref|NP_001045580.1|  Os02g0100200 [Oryza sativa (...   110    7e-29 
gi|115434884|ref|NP_001042200.1|  Os01g0179500 [Oryza sativa (...   112    3e-28 
gi|21593642|gb|AAM65609.1|  mitotic checkpoint protein, putative   33.1    0.69  
gi|40882690|gb|AAR96231.1|  putative integrase [Oryza sativa (...  32.7    0.91  
gi|12597795|gb|AAG60107.1|AC073178_18  mitotic checkpoint protein  31.2    2.6  
gi|42572045|ref|NP_974113.1|  nucleotide binding [Arabidopsis tha  31.2    2.6   
gi|18409261|ref|NP_564965.1|  nucleotide binding [Arabidopsis tha  31.2    2.6   
gi|108862896|gb|ABG22067.1|  Leucine Rich Repeat family protei...  30.0    5.9  
gi|115489334|ref|NP_001067154.1|  Os12g0586000 [Oryza sativa (...  30.0    5.9   
gi|108862895|gb|ABG22066.1|  Leucine Rich Repeat family protei...  30.0    5.9  
gi|77556936|gb|ABA99732.1|  Leucine Rich Repeat family protein...  30.0    5.9  
gi|115475982|ref|NP_001061587.1|  Os08g0338900 [Oryza sativa (...  30.0    5.9

Alignments

 

>gi|15238266|ref|NP_196087.1|  unknown protein [Arabidopsis thaliana]
 gi|7413529|emb|CAB86009.1|  putative protein [Arabidopsis thaliana]
Length=766

 Score =  157 bits (397),  Expect(2) = 2e-46
 Identities = 77/147 (52%), Positives = 102/147 (69%), Gaps = 5/147 (3%)
 Frame = +2

Query  2    NSSVANVSDVGSSISDL-----MQNVDSSQCSANILVIEADRCYREEGAIVTLELSASRE  166
            +S ++N S V + IS +      + +DS  CSANIL+I +DRC REEG  V LE S+S+E
Sbjct  377  SSVLSNSSPVSNGISIIPMTKTKEELDSICCSANILMIHSDRCTREEGFSVMLEASSSKE  436

Query  167  WLLVVKKGSSTKFACKADKFMRPSSCNRFTHAIIWTGDDNWKLEFPNRQDWIIFKDLYKE  346
            W LV+KK  + +++  A + MRP S NR THA +W G DNWKLEF +RQDW+ FKD+YKE
Sbjct  437  WFLVIKKDGAIRYSHMAQRTMRPFSSNRITHATVWMGGDNWKLEFCDRQDWLGFKDIYKE  496

Query  347  CSERNVPASTVKAIPVPGVHEVPGYED  427
            C ERN+   +VK IP+PGV EV GY +
Sbjct  497  CYERNLLEQSVKVIPIPGVREVCGYAE  523


 Score = 48.5 bits (114),  Expect(2) = 2e-46
 Identities = 21/32 (65%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +1

Query  460  YISLDGDEVSRALAKRTANYDMDSEDEEWVKK  555
            YIS++ DEVSRA+A+  A YDMDSEDEEW+++
Sbjct  538  YISVNEDEVSRAMARSIALYDMDSEDEEWLER  569


>gi|15233866|ref|NP_194988.1|  nucleic acid binding [Arabidopsis thaliana]
 gi|3063708|emb|CAA18599.1|  putative protein [Arabidopsis thaliana]
 gi|7270166|emb|CAB79979.1|  putative protein [Arabidopsis thaliana]
Length=1544

 Score =  122 bits (307),  Expect(2) = 7e-29
 Identities = 53/121 (43%), Positives = 83/121 (68%), Gaps = 0/121 (0%)
 Frame = +2

Query  50    LMQNVDSSQCSANILVIEADRCYREEGAIVTLELSASREWLLVVKKGSSTKFACKADKFM  229
             + ++++SS C AN+LV   DR +RE GA + LE   + EW L VK   +TK++ +A +F+
Sbjct  1035  IQKDLESSLCDANVLVTLGDRGWREYGAQIFLEPFDNNEWRLAVKISGTTKYSHRAHQFL  1094

Query  230   RPSSCNRFTHAIIWTGDDNWKLEFPNRQDWIIFKDLYKECSERNVPASTVKAIPVPGVHE  409
             +P S NRFTHA++W G  +W LEFP+R  W +FK++++EC  RN  A+ V+ IP+PG+  
Sbjct  1095  QPGSVNRFTHAMMWKGGKDWTLEFPDRGQWFLFKEMHEECYNRNTRAALVRNIPIPGIRM  1154

Query  410   V  412
             +
Sbjct  1155  I  1155


 Score = 24.3 bits (51),  Expect(2) = 7e-29
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
 Frame = +1

Query  481   EVSRALAKRTANYDMDSEDEEWVKKV  558
             +V  AL      YDMDS+DE+ + ++
Sbjct  1181  DVEMALDPSRVMYDMDSDDEQCLLRI  1206


>gi|115443601|ref|NP_001045580.1|  Os02g0100200 [Oryza sativa (japonica cultivar-group)]
 gi|41053215|dbj|BAD08176.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|51535305|dbj|BAD38566.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113535111|dbj|BAF07494.1|  Os02g0100200 [Oryza sativa (japonica cultivar-group)]
Length=849

 Score =  110 bits (274),  Expect(2) = 7e-29
 Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 11/143 (7%)
 Frame = +2

Query  38   SISDLMQNVDSSQCSANILVIEADRCYREEGAIVTLELSASREWLLVVKKGSSTKFACKA  217
            +++++ QN+DS  C AN+L+I+ DRC+REEGA V LE S S EW + VK     + + K 
Sbjct  489  ALAEVRQNIDSVHCRANLLIIQPDRCWREEGAEVMLEPSESNEWCIAVKIHGVNRISLKP  548

Query  218  DKFMRPSSCNRFTHAIIWTGDDNWKLEFPNRQDWIIFKDLYKECSERNVPASTVKAIPVP  397
             +  R    NRFTHA I   DD  K+EF ++ DW++FK+L  E  ERN   S  K IP+P
Sbjct  549  SE-QRFYVVNRFTHAYILAVDDGLKIEFSDKWDWLLFKELQIEGRERN---SQGKMIPIP  604

Query  398  GVHEVPGYEDRRSV----PFCRP  454
            GV+EV    D   V    PF RP
Sbjct  605  GVNEV---SDDMGVIGTYPFSRP  624


 Score = 37.0 bits (84),  Expect(2) = 7e-29
 Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
 Frame = +1

Query  460  YISLDGDEVSRALAKRTANYDMDSEDEEWVKKV  558
            YI +  DEV RAL+ R + YD+DSEDE+W+ ++
Sbjct  628  YIRMADDEVGRALS-RDSVYDLDSEDEQWLTQL  659


>gi|115434884|ref|NP_001042200.1|  Os01g0179500 [Oryza sativa (japonica cultivar-group)]
 gi|55296117|dbj|BAD67836.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113531731|dbj|BAF04114.1|  Os01g0179500 [Oryza sativa (japonica cultivar-group)]
Length=1078

 Score =  112 bits (279),  Expect(2) = 3e-28
 Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 0/129 (0%)
 Frame = +2

Query  65   DSSQCSANILVIEADRCYREEGAIVTLELSASREWLLVVKKGSSTKFACKADKFMRPSSC  244
            +S  C AN+LV   DR +RE    +T++     E  + VK    TK+A K  + ++P + 
Sbjct  575  ESLACVANVLVTVGDRGWREYDTQITIDSDGQSERRICVKLAEGTKYAHKVLQVLQPGAT  634

Query  245  NRFTHAIIWTGDDNWKLEFPNRQDWIIFKDLYKECSERNVPASTVKAIPVPGVHEVPGYE  424
            NR+THA+IW G   W LEFP+R  W+IFK ++ EC   N+ A++VK IP+PGV     ++
Sbjct  635  NRYTHAMIWKGGTEWCLEFPDRSQWLIFKQMHDECYSHNIRAASVKNIPIPGVCFAEAHD  694

Query  425  DRRSVPFCR  451
            D  +V F R
Sbjct  695  DHDAVSFVR  703


 Score = 33.1 bits (74),  Expect(2) = 3e-28
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 0/37 (0%)
 Frame = +1

Query  445  LQTRFYISLDGDEVSRALAKRTANYDMDSEDEEWVKK  555
            ++++ YI   G +V  AL +    YDMDS+DE WV +
Sbjct  702  VRSQDYIGHIGTDVEMALDESRVIYDMDSDDEVWVSR  738


>gi|21593642|gb|AAM65609.1|  mitotic checkpoint protein, putative [Arabidopsis thaliana]
Length=314

 Score = 33.1 bits (74),  Expect = 0.69
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +2

Query  41   ISDLMQNVDSSQCSANILVIEAD---RCYREEGAIVTLELSASREWLLVVKKGSSTKFAC  211
            I D +  +  S  S N+LV   D   R Y  E + ++LEL++    L    +  ST +A 
Sbjct  12   IEDAVSRLRFSPQSNNLLVASWDSYLRLYNVESSSLSLELNSQAALLDCCFENESTSYAS  71

Query  212  KADKFMRPSSCNRFTHAIIWTGDD  283
             +D F+R    N  T   I   DD
Sbjct  72   GSDGFIRRYDLNAGTFDTIGRHDD  95


>gi|40882690|gb|AAR96231.1|  putative integrase [Oryza sativa (japonica cultivar-group)]
 gi|108708487|gb|ABF96282.1|  retrotransposon protein, putative, Ty1-copia subclass [Oryza 
sativa (japonica cultivar-group)]
Length=1094

 Score = 32.7 bits (73),  Expect = 0.91
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 0/42 (0%)
 Frame = +1

Query  442  VLQTRFYISLDGDEVSRALAKRTANYDMDSEDEEWVKKVXNE  567
            +L T   + LD DE+  A+AK  AN     +DE W + + +E
Sbjct  665  ILDTTALVELDSDELYLAVAKEPANLTEAEQDEHWRQAMQDE  706


>gi|12597795|gb|AAG60107.1|AC073178_18  mitotic checkpoint protein, putative [Arabidopsis thaliana]
Length=315

 Score = 31.2 bits (69),  Expect = 2.6
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query  41   ISDLMQNVDSSQCSANILVIEAD---RCYREEGAIVTLELSASREWLLVVKKGSSTKFAC  211
            I D +  +  S  S N+LV   D   R Y  E + ++LEL++    L    +  ST F  
Sbjct  12   IEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTS  71

Query  212  KADKFMRPSSCNRFTHAIIWTGDD  283
             +D F+R    N  T   I   DD
Sbjct  72   GSDGFIRRYDLNAGTVDTIGRHDD  95


>gi|42572045|ref|NP_974113.1|  nucleotide binding [Arabidopsis thaliana]
Length=272

 Score = 31.2 bits (69),  Expect = 2.6
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query  41   ISDLMQNVDSSQCSANILVIEAD---RCYREEGAIVTLELSASREWLLVVKKGSSTKFAC  211
            I D +  +  S  S N+LV   D   R Y  E + ++LEL++    L    +  ST F  
Sbjct  12   IEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTS  71

Query  212  KADKFMRPSSCNRFTHAIIWTGDD  283
             +D F+R    N  T   I   DD
Sbjct  72   GSDGFIRRYDLNAGTVDTIGRHDD  95


>gi|18409261|ref|NP_564965.1|  nucleotide binding [Arabidopsis thaliana]
Length=314

 Score = 31.2 bits (69),  Expect = 2.6
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query  41   ISDLMQNVDSSQCSANILVIEAD---RCYREEGAIVTLELSASREWLLVVKKGSSTKFAC  211
            I D +  +  S  S N+LV   D   R Y  E + ++LEL++    L    +  ST F  
Sbjct  12   IEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCFENESTSFTS  71

Query  212  KADKFMRPSSCNRFTHAIIWTGDD  283
             +D F+R    N  T   I   DD
Sbjct  72   GSDGFIRRYDLNAGTVDTIGRHDD  95


>gi|108862896|gb|ABG22067.1|  Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=609

 Score = 30.0 bits (66),  Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
 Frame = -1

Query  264  IA*VKRLQELGLINLSALHANLVELPFFTTRSHSRDAESSKVTIAP  127
            IA ++ L+ L LIN   + A L  L  FTT S  R     K+T+ P
Sbjct  366  IATMQNLKALVLINYGTISATLDNLSAFTTLSDLRSLWLEKITLPP  411


>gi|115489334|ref|NP_001067154.1|  Os12g0586000 [Oryza sativa (japonica cultivar-group)]
 gi|108862894|gb|ABG22065.1|  Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113649661|dbj|BAF30173.1|  Os12g0586000 [Oryza sativa (japonica cultivar-group)]
Length=601

 Score = 30.0 bits (66),  Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
 Frame = -1

Query  264  IA*VKRLQELGLINLSALHANLVELPFFTTRSHSRDAESSKVTIAP  127
            IA ++ L+ L LIN   + A L  L  FTT S  R     K+T+ P
Sbjct  358  IATMQNLKALVLINYGTISATLDNLSAFTTLSDLRSLWLEKITLPP  403


>gi|108862895|gb|ABG22066.1|  Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=608

 Score = 30.0 bits (66),  Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
 Frame = -1

Query  264  IA*VKRLQELGLINLSALHANLVELPFFTTRSHSRDAESSKVTIAP  127
            IA ++ L+ L LIN   + A L  L  FTT S  R     K+T+ P
Sbjct  365  IATMQNLKALVLINYGTISATLDNLSAFTTLSDLRSLWLEKITLPP  410


>gi|77556936|gb|ABA99732.1|  Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=896

 Score = 30.0 bits (66),  Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
 Frame = -1

Query  264  IA*VKRLQELGLINLSALHANLVELPFFTTRSHSRDAESSKVTIAP  127
            IA ++ L+ L LIN   + A L  L  FTT S  R     K+T+ P
Sbjct  634  IATMQNLKALVLINYGTISATLDNLSAFTTLSDLRSLWLEKITLPP  679


>gi|115475982|ref|NP_001061587.1|  Os08g0338900 [Oryza sativa (japonica cultivar-group)]
 gi|38636944|dbj|BAD03206.1|  enhancer of polycomb-like protein [Oryza sativa (japonica cultivar-group)]
 gi|38637388|dbj|BAD03647.1|  enhancer of polycomb-like protein [Oryza sativa (japonica cultivar-group)]
 gi|113623556|dbj|BAF23501.1|  Os08g0338900 [Oryza sativa (japonica cultivar-group)]
Length=453

 Score = 30.0 bits (66),  Expect = 5.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +1

Query  436  RAVLQTRFYISLDGDEVSRALAKRTANYDMDSEDEEWVKKVXNE  567
            R   Q   YI   G   +RA       YD+D+EDE+W++   NE
Sbjct  84   RTFAQPTSYIRARG---ARAEIGEFVEYDLDNEDEDWLEDYNNE  124

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 379
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 567
Length of database: 101054579
Length adjustment: 107
Effective length of query: 460
Effective length of database: 70736236
Effective search space: 5800371352
Effective search space used: 5800371352
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)