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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168937290-13853-89918533587.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig188
Length=174

Distribution of 6 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|115487238|ref|NP_001066106.1|  Os12g0137100 [Oryza sativa (...  41.2    0.001 Gene info
gi|115484099|ref|NP_001065711.1|  Os11g0140600 [Oryza sativa (...  41.2    0.001 Gene info
gi|22326598|ref|NP_196037.2|  calcium ion binding [Arabidopsis...  38.1    0.009 UniGene infoGene info
gi|22330957|ref|NP_187641.2|  calcium ion binding [Arabidopsis...  34.3    0.13  UniGene infoGene info
gi|55376007|gb|AAV50014.1|  calcium-binding EF hand family protei  32.3    0.51  UniGene info
gi|25992527|gb|AAN77144.1|  fiber protein Fb1 [Gossypium barbaden  28.1    9.6
Alignments

>gi|115487238|ref|NP_001066106.1| Gene info Os12g0137100 [Oryza sativa (japonica cultivar-group)]
 gi|77552964|gb|ABA95760.1| Gene info EF hand family protein, expressed [Oryza sativa (japonica cultivar-group)]
 gi|113648613|dbj|BAF29125.1| Gene info Os12g0137100 [Oryza sativa (japonica cultivar-group)]
Length=292

 Score = 41.2 bits (95),  Expect = 0.001
 Identities = 19/20 (95%), Positives = 19/20 (95%), Gaps = 0/20 (0%)
 Frame = +1

Query  1    GDATFTYEAFMLTVLPFLIA  60
            G ATFTYEAFMLTVLPFLIA
Sbjct  273  GSATFTYEAFMLTVLPFLIA  292


>gi|115484099|ref|NP_001065711.1| Gene info Os11g0140600 [Oryza sativa (japonica cultivar-group)]
 gi|77548608|gb|ABA91405.1| Gene info EF hand family protein, expressed [Oryza sativa (japonica cultivar-group)]
 gi|113644415|dbj|BAF27556.1| Gene info Os11g0140600 [Oryza sativa (japonica cultivar-group)]
Length=308

 Score = 41.2 bits (95),  Expect = 0.001
 Identities = 19/20 (95%), Positives = 19/20 (95%), Gaps = 0/20 (0%)
 Frame = +1

Query  1    GDATFTYEAFMLTVLPFLIA  60
            G ATFTYEAFMLTVLPFLIA
Sbjct  289  GSATFTYEAFMLTVLPFLIA  308


>gi|22326598|ref|NP_196037.2| UniGene infoGene info calcium ion binding [Arabidopsis thaliana]
 gi|9955572|emb|CAC05499.1| Gene info EF-hand Calcium binding protein-like [Arabidopsis thaliana]
 gi|19698991|gb|AAL91231.1| UniGene infoGene info EF-hand calcium binding protein-like [Arabidopsis thaliana]
 gi|31711842|gb|AAP68277.1| UniGene infoGene info At5g04170 [Arabidopsis thaliana]
Length=354

 Score = 38.1 bits (87),  Expect = 0.009
 Identities = 17/20 (85%), Positives = 18/20 (90%), Gaps = 0/20 (0%)
 Frame = +1

Query  1    GDATFTYEAFMLTVLPFLIA  60
            G ATF YE+FMLTVLPFLIA
Sbjct  335  GSATFNYESFMLTVLPFLIA  354


>gi|22330957|ref|NP_187641.2| UniGene infoGene info calcium ion binding [Arabidopsis thaliana]
 gi|17064844|gb|AAL32576.1| UniGene infoGene info Unknown protein [Arabidopsis thaliana]
 gi|50897258|gb|AAT85768.1| UniGene infoGene info At3g10300 [Arabidopsis thaliana]
Length=335

 Score = 34.3 bits (77),  Expect = 0.13
 Identities = 15/20 (75%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
 Frame = +1

Query  1    GDATFTYEAFMLTVLPFLIA  60
            G A F YE FMLTVLPFL+A
Sbjct  316  GSAIFNYENFMLTVLPFLVA  335


>gi|55376007|gb|AAV50014.1| UniGene info calcium-binding EF hand family protein [Malus x domestica]
Length=39

 Score = 32.3 bits (72),  Expect = 0.51
 Identities = 15/20 (75%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
 Frame = +1

Query  1   GDATFTYEAFMLTVLPFLIA  60
           G  TF+YE FMLTVLPF IA
Sbjct  20  GMGTFSYEEFMLTVLPFPIA  39


>gi|25992527|gb|AAN77144.1|  fiber protein Fb1 [Gossypium barbadense]
Length=109

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
 Frame = +1

Query  1    GDATFTYEAFMLTVLPFLIA  60
            G AT +Y++FM  V+PFL++
Sbjct  88   GSATLSYDSFMSLVIPFLVS  107







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 120
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 174
Length of database: 101054579
Length adjustment: 31
Effective length of query: 143
Effective length of database: 92270760
Effective search space: 2491310520
Effective search space used: 2491310520
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)