RID=1168926432-28011-202252053085.BLASTQ1, Contig2

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926432-28011-202252053085.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig2
Length=613

Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|15236949|ref|NP_194433.1|  unknown protein [Arabidopsis tha...   262    8e-70 
gi|15220724|ref|NP_176410.1|  unknown protein [Arabidopsis tha...   233    3e-61 
gi|15227763|ref|NP_179874.1|  unknown protein [Arabidopsis tha...   219    8e-57 
gi|115475113|ref|NP_001061153.1|  Os08g0187900 [Oryza sativa (...   196    7e-50 
gi|116059773|emb|CAL55480.1|  Ubiquitin-conjugating enzyme (ISS)    152    9e-37
gi|49660123|gb|AAT68352.1|  hypothetical protein At2g22890 [Ar...   148    2e-35 
gi|14488086|gb|AAK63863.1|AF389291_1  AT4g27030/F10M23_370 [Ar...   110    5e-24 
gi|15233758|ref|NP_194157.1|  hydrolase, hydrolyzing O-glycosy...  31.6    2.4   
gi|26449564|dbj|BAC41908.1|  unknown protein [Arabidopsis thalian  30.4    5.2   
gi|595986|gb|AAA79915.1|  cysteine proteinase                      30.0    6.8  
gi|79536804|ref|NP_200133.2|  DNA binding / transcription fact...  30.0    6.8   
gi|9759168|dbj|BAB09783.1|  unnamed protein product [Arabidopsis   30.0    6.8

Alignments

 

>gi|15236949|ref|NP_194433.1|  unknown protein [Arabidopsis thaliana]
 gi|4455226|emb|CAB36549.1|  putative protein [Arabidopsis thaliana]
 gi|7269556|emb|CAB79558.1|  putative protein [Arabidopsis thaliana]
Length=323

 Score =  262 bits (669),  Expect = 8e-70
 Identities = 121/172 (70%), Positives = 142/172 (82%), Gaps = 0/172 (0%)
 Frame = -1

Query  601  IDIYGDASTPVFGHKIEGFQGHHKWPWIITRRQFAXNLYALARNVTITVLPIDILCNDPV  422
            ID YGD STPV G +IE FQGHHKWPW ITRRQFA NL+ALA+ +T TVLP+D+  NDPV
Sbjct  151  IDNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFNDPV  210

Query  421  VQGFVSICAGCIMFSQQFHAWSHGTKSKLPPLVVALQDAGVLVSRLQHSAHHKPPYNSNY  242
              GFV   A CI+FSQQFHAW+HGTKSKLPPLVVALQD G+LVSR QH+ HH+ PYN+NY
Sbjct  211  FHGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNNNY  270

Query  241  CIVSGVCNKFLDKNKVFEALEMVIFFKLGVRPRSWSEPGAEWTEETDETHPQ  86
            CIVSG  N  LD++KVFEALEMV +F+LGVRPRSWSEP ++W EET+ ++ Q
Sbjct  271  CIVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEISNNQ  322


>gi|15220724|ref|NP_176410.1|  unknown protein [Arabidopsis thaliana]
 gi|2160143|gb|AAB60765.1|  F19K23.12 gene product [Arabidopsis thaliana]
Length=295

 Score =  233 bits (595),  Expect = 3e-61
 Identities = 103/167 (61%), Positives = 131/167 (78%), Gaps = 0/167 (0%)
 Frame = -1

Query  601  IDIYGDASTPVFGHKIEGFQGHHKWPWIITRRQFAXNLYALARNVTITVLPIDILCNDPV  422
            ID YG ASTP+ G ++E  QGHHK+PW IT+RQFA N Y +AR +T  VLP+++  N+P+
Sbjct  122  IDNYGGASTPIVGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPL  181

Query  421  VQGFVSICAGCIMFSQQFHAWSHGTKSKLPPLVVALQDAGVLVSRLQHSAHHKPPYNSNY  242
               FVS  A CI+ SQQFHAW+HGTKSKLPPLV+ALQD G+LVSR  H  HH+ PYNSNY
Sbjct  182  FHSFVSTFAFCILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNY  241

Query  241  CIVSGVCNKFLDKNKVFEALEMVIFFKLGVRPRSWSEPGAEWTEETD  101
            C+VSG  NK LD++ +F+ALEM +FF+ GVRP SW+EP ++WTEET+
Sbjct  242  CVVSGAWNKVLDESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE  288


>gi|15227763|ref|NP_179874.1|  unknown protein [Arabidopsis thaliana]
 gi|3445206|gb|AAC32436.1|  unknown protein [Arabidopsis thaliana]
Length=279

 Score =  219 bits (557),  Expect = 8e-57
 Identities = 100/160 (62%), Positives = 125/160 (78%), Gaps = 0/160 (0%)
 Frame = -1

Query  598  DIYGDASTPVFGHKIEGFQGHHKWPWIITRRQFAXNLYALARNVTITVLPIDILCNDPVV  419
            D YGD STP+ G  IE  Q HHK PW IT+RQFA NL+ +AR  T+ VLP+D+  +D VV
Sbjct  120  DNYGDESTPLVGIHIEDSQDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVV  179

Query  418  QGFVSICAGCIMFSQQFHAWSHGTKSKLPPLVVALQDAGVLVSRLQHSAHHKPPYNSNYC  239
             GFVS+ A C++F Q FHAW+HGTKSKLPPLVV LQD G+LVSR+ H  HH+ PYN+NYC
Sbjct  180  HGFVSMFAFCVLFCQLFHAWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYC  239

Query  238  IVSGVCNKFLDKNKVFEALEMVIFFKLGVRPRSWSEPGAE  119
            +VSGV NK LD++ VF+A+EMV++ +LGVRPRSW+EP  E
Sbjct  240  VVSGVWNKVLDESNVFKAMEMVLYIQLGVRPRSWTEPNYE  279


>gi|115475113|ref|NP_001061153.1|  Os08g0187900 [Oryza sativa (japonica cultivar-group)]
 gi|38637069|dbj|BAD03326.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|40253819|dbj|BAD05755.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|113623122|dbj|BAF23067.1|  Os08g0187900 [Oryza sativa (japonica cultivar-group)]
Length=288

 Score =  196 bits (497),  Expect = 7e-50
 Identities = 94/173 (54%), Positives = 120/173 (69%), Gaps = 4/173 (2%)
 Frame = -1

Query  601  IDIYGDASTPVFGHKIEGFQGHHKWPWIITRRQFAXNLYALARNVTITVLPIDIL---CN  431
            +D YGDA TPV G +I  FQGHH+ P  ITRR+   NL+ALAR V + + P         
Sbjct  103  VDNYGDADTPVLGPQIAAFQGHHRHPSTITRREPCNNLHALARAVALALPPAGAALAAAG  162

Query  430  DPV-VQGFVSICAGCIMFSQQFHAWSHGTKSKLPPLVVALQDAGVLVSRLQHSAHHKPPY  254
             P     F ++ A C++ SQQFHAW+HG   +LPP V A+Q AGVLVSR QH AHH+ PY
Sbjct  163  APASAHAFAAVFAACVVLSQQFHAWAHGNPRRLPPGVGAMQRAGVLVSRAQHGAHHRAPY  222

Query  253  NSNYCIVSGVCNKFLDKNKVFEALEMVIFFKLGVRPRSWSEPGAEWTEETDET  95
            ++NYCIVSG+ N  LD+++VFEA+EMV+F + GVRPRSW EP A WTE+ D+T
Sbjct  223  DNNYCIVSGMWNATLDRHRVFEAMEMVVFLRTGVRPRSWDEPDAAWTEDYDDT  275


>gi|116059773|emb|CAL55480.1|  Ubiquitin-conjugating enzyme (ISS) [Ostreococcus tauri]
Length=320

 Score =  152 bits (384),  Expect = 9e-37
 Identities = 73/157 (46%), Positives = 94/157 (59%), Gaps = 0/157 (0%)
 Frame = -1

Query  601  IDIYGDASTPVFGHKIEGFQGHHKWPWIITRRQFAXNLYALARNVTITVLPIDILCNDPV  422
            +D YG   TP+ G  I+ FQGHHK+PW IT+RQ+A N++       +   P  +L + P 
Sbjct  143  VDNYGSKDTPLLGKVIDAFQGHHKYPWTITKRQWANNIHTTCVAPLVFTTPTLLLNDRPT  202

Query  421  VQGFVSICAGCIMFSQQFHAWSHGTKSKLPPLVVALQDAGVLVSRLQHSAHHKPPYNSNY  242
               FV +    I+ SQQFHAWSH  KS+LP  V+A QD G+LV R  H  HHK P+  +Y
Sbjct  203  DLIFVGVFTALIVLSQQFHAWSHMKKSELPSAVLAAQDIGLLVGRRDHGQHHKAPFEGHY  262

Query  241  CIVSGVCNKFLDKNKVFEALEMVIFFKLGVRPRSWSE  131
            CIVSG  N  LD +  F  LE +IF   GV PR WS+
Sbjct  263  CIVSGYWNPILDDSGFFRKLEQMIFKATGVAPRCWSD  299


>gi|49660123|gb|AAT68352.1|  hypothetical protein At2g22890 [Arabidopsis thaliana]
 gi|50058919|gb|AAT69204.1|  hypothetical protein At2g22890 [Arabidopsis thaliana]
Length=230

 Score =  148 bits (373),  Expect = 2e-35
 Identities = 69/111 (62%), Positives = 83/111 (74%), Gaps = 0/111 (0%)
 Frame = -1

Query  598  DIYGDASTPVFGHKIEGFQGHHKWPWIITRRQFAXNLYALARNVTITVLPIDILCNDPVV  419
            D YGD STP+ G  IE  Q HHK PW IT+RQFA NL+ +AR  T+ VLP+D+  +D VV
Sbjct  120  DNYGDESTPLVGIHIEDSQDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVV  179

Query  418  QGFVSICAGCIMFSQQFHAWSHGTKSKLPPLVVALQDAGVLVSRLQHSAHH  266
             GFVS+ A C++F Q FHAW+HGTKSKLPPLVV LQD G+LVSR+ H  HH
Sbjct  180  HGFVSMFAFCVLFCQLFHAWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHH  230


>gi|14488086|gb|AAK63863.1|AF389291_1  AT4g27030/F10M23_370 [Arabidopsis thaliana]
 gi|25090245|gb|AAN72261.1|  At4g27030/F10M23_370 [Arabidopsis thaliana]
Length=75

 Score =  110 bits (274),  Expect = 5e-24
 Identities = 48/73 (65%), Positives = 61/73 (83%), Gaps = 0/73 (0%)
 Frame = -1

Query  304  GVLVSRLQHSAHHKPPYNSNYCIVSGVCNKFLDKNKVFEALEMVIFFKLGVRPRSWSEPG  125
            G+LVSR QH+ HH+ PYN+NYCIVSG  N  LD++KVFEALEMV +F+LGVRPRSWSEP 
Sbjct  2    GLLVSRRQHAEHHRAPYNNNYCIVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPN  61

Query  124  AEWTEETDETHPQ  86
            ++W EET+ ++ Q
Sbjct  62   SDWIEETEISNNQ  74


>gi|15233758|ref|NP_194157.1|  hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana]
 gi|75266338|sp|Q9STW8|GUN21_ARATH  Endoglucanase 21 (Endo-1,4-beta glucanase 21)
 gi|5051768|emb|CAB45061.1|  endo-1, 4-beta-glucanase like protein [Arabidopsis thaliana]
 gi|7269276|emb|CAB79336.1|  endo-1, 4-beta-glucanase like protein [Arabidopsis thaliana]
Length=620

 Score = 31.6 bits (70),  Expect = 2.4
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
 Frame = -1

Query  394  GCIMFSQQFHAWSHGTKSKLPPLVVALQDAG---VLVSRLQHSAHHKPPYNSNYCIVSGV  224
            GCI+ S++   W+ GT      +VV    +G   ++V  L H  HHK P   NY I    
Sbjct  63   GCILVSRKIFLWTLGT------IVVTALLSGFITLIVKTLPHH-HHKEPPPDNYTIALRT  115

Query  223  CNKFLD  206
              KF +
Sbjct  116  ALKFFN  121


>gi|26449564|dbj|BAC41908.1|  unknown protein [Arabidopsis thaliana]
Length=98

 Score = 30.4 bits (67),  Expect = 5.2
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 0/53 (0%)
 Frame = +2

Query  98   FISFFSPFSTRLTPRPGSHPELEKYNHLQCLEHLVFVQKFIANSTHYAVVTVI  256
            ++S   P S  L+P   SHP    ++  Q  +   +  + + +  H+A V V+
Sbjct  30   WLSILVPASPTLSPNSPSHPPASSHSRAQAKQLQSYTHRILMSEKHFAPVPVV  82


>gi|595986|gb|AAA79915.1|  cysteine proteinase
Length=427

 Score = 30.0 bits (66),  Expect = 6.8
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 12/43 (27%)
 Frame = +1

Query  175  PSPMPRTPCFCPKIYCKLHSLCSS------------YCYMVAC  267
            P P P +P   PK+ C  +S C S            YCYM  C
Sbjct  320  PGPSPPSPPPAPKVVCDSYSSCPSATTCCCVYEYGPYCYMWGC  362


>gi|79536804|ref|NP_200133.2|  DNA binding / transcription factor [Arabidopsis thaliana]
 gi|45935051|gb|AAS79560.1|  basic helix-loop-helix family protein [Arabidopsis thaliana]
 gi|46367490|emb|CAG25871.1|  hypothetical protein [Arabidopsis thaliana]
 gi|112889216|gb|ABI26170.1|  SPEECHLESS [Arabidopsis thaliana]
Length=364

 Score = 30.0 bits (66),  Expect = 6.8
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query  43   FCYKRGKK--IFNGL*-FEDEFHQFLQSIQHQAHSKTWVSPRA*KI*PSPMPRTPCFCPK  213
            F  KRG +  I  G+  +  E  Q LQS++ +   KT+    + ++ PSP P  P   P+
Sbjct  129  FYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRPSPPVLSPR  188


>gi|9759168|dbj|BAB09783.1|  unnamed protein product [Arabidopsis thaliana]
Length=294

 Score = 30.0 bits (66),  Expect = 6.8
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query  43   FCYKRGKK--IFNGL*-FEDEFHQFLQSIQHQAHSKTWVSPRA*KI*PSPMPRTPCFCPK  213
            F  KRG +  I  G+  +  E  Q LQS++ +   KT+    + ++ PSP P  P   P+
Sbjct  129  FYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRPSPPVLSPR  188

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 429
Number of extensions: 10
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 613
Length of database: 101054579
Length adjustment: 108
Effective length of query: 505
Effective length of database: 70452887
Effective search space: 6763477152
Effective search space used: 6763477152
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)