Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938238-18271-212196483574.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig210 Length=328
Score E Sequences producing significant alignments: (Bits) Value gi|22530930|gb|AAM96969.1| vacuolar sorting receptor-like pro... 113 2e-25 gi|2827665|emb|CAA16619.1| vacuolar sorting receptor-like pro... 112 5e-25 gi|15235296|ref|NP_193744.1| calcium ion binding / peptidase ... 112 5e-25 gi|115469398|ref|NP_001058298.1| Os06g0664300 [Oryza sativa (... 110 2e-24 gi|9755389|gb|AAF98196.1|AC000107_19 F17F8.23 [Arabidopsis thali 108 7e-24 gi|15221538|ref|NP_174375.1| calcium ion binding / peptidase [Ar 108 7e-24 gi|71153406|sp|Q9FYH7|VSR6_ARATH Vacuolar sorting receptor 6 ... 108 7e-24 gi|115460476|ref|NP_001053838.1| Os04g0611400 [Oryza sativa (... 95.9 4e-20 gi|38345801|emb|CAE03573.2| OSJNBa0085I10.18 [Oryza sativa (j... 95.9 4e-20 gi|15226864|ref|NP_181040.1| calcium ion binding / peptidase ... 84.0 1e-16 gi|12659449|gb|AAG60258.1| EGF receptor-like protein [Physcomitr 79.3 4e-15 gi|8886326|gb|AAF80450.1|AF161719_1 vacuolar targeting receptor 71.2 1e-12 gi|15227732|ref|NP_180588.1| calcium ion binding / peptidase ... 70.5 2e-12 gi|115487010|ref|NP_001065992.1| Os12g0116000 [Oryza sativa (... 70.1 2e-12 gi|6653740|gb|AAF22842.1|AF209910_1 vacuolar sorting receptor pr 70.1 2e-12 gi|115474089|ref|NP_001060643.1| Os07g0680000 [Oryza sativa (... 70.1 2e-12 gi|2443857|gb|AAB72113.1| vacuolar sorting receptor homolog [Zea 68.9 5e-12 gi|62319176|dbj|BAD94353.1| putative vacuolar sorting receptor [ 68.6 7e-12 gi|15225994|ref|NP_179079.1| VSR-2; calcium ion binding / pep... 68.6 7e-12 gi|15225998|ref|NP_179081.1| calcium ion binding / peptidase ... 68.2 9e-12 gi|71153401|sp|P93484|VSR1_PEA Vacuolar sorting receptor 1 pr... 68.2 9e-12 gi|92883544|gb|ABE86982.1| Protease-associated PA [Medicago trun 67.4 1e-11 gi|1737220|gb|AAB72112.1| vacuolar sorting receptor homolog [Ara 67.4 1e-11 gi|2943792|dbj|BAA25079.1| PV72 [Cucurbita cv. Kurokawa Amakuri] 67.4 1e-11 gi|115452867|ref|NP_001050034.1| Os03g0335300 [Oryza sativa (... 67.0 2e-11 gi|83284015|gb|ABC01915.1| vacuolar sorting receptor protein ... 66.2 3e-11 gi|115481614|ref|NP_001064400.1| Os10g0346600 [Oryza sativa (... 66.2 3e-11 gi|1737218|gb|AAB72111.1| vacuolar sorting receptor homolog [Ara 65.9 4e-11 gi|15081793|gb|AAK82551.1| AT3g52850/F8J2_20 [Arabidopsis thalia 65.9 4e-11 gi|15231697|ref|NP_190853.1| ATELP1 [Arabidopsis thaliana] >g... 65.9 4e-11 gi|15487292|dbj|BAB64531.1| vacuolar sorting receptor [Vigna mun 60.8 1e-09 gi|22748371|gb|AAN05373.1| Putative vacuolar sorting receptor... 60.5 2e-09 gi|116059033|emb|CAL54740.1| Fibrillins and related proteins ... 51.2 1e-06 gi|116059034|emb|CAL54741.1| unnamed protein product [Ostreococc 47.4 2e-05 gi|13506898|gb|AAK28390.1|AF246967_1 receptor-like protein kinas 31.2 1.2 gi|33321012|gb|AAQ06259.1| unknown [Sorghum bicolor] 30.8 1.5 gi|15228695|ref|NP_191774.1| ATPase, coupled to transmembrane... 30.0 2.6 gi|92879597|gb|ABE85616.1| Leucine-rich repeat, plant specific [ 29.3 4.4 gi|18398810|ref|NP_566371.1| unknown protein [Arabidopsis tha... 28.5 7.5 gi|30681227|ref|NP_850552.1| unknown protein [Arabidopsis thalia 28.5 7.5 gi|9757692|dbj|BAB08211.1| unnamed protein product [Oryza sat... 28.5 7.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 190 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 328 Length of database: 101054579 Length adjustment: 77 Effective length of query: 251 Effective length of database: 79236706 Effective search space: 2535574592 Effective search space used: 2535574592 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)