RID=1168938368-29106-189607683625.BLASTQ1, Contig213

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938368-29106-189607683625.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig213
Length=505

Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|76782192|gb|ABA54866.1|  putative 3-dehydroquinate synthase [F   167    2e-41
gi|18654278|gb|AAL77575.1|L46847_1  dehydroquinate synthase [Lyco   145    1e-34 
gi|21537014|gb|AAM61355.1|  3-dehydroquinate synthase-like protei   140    2e-33 
gi|18425036|ref|NP_569029.1|  3-dehydroquinate synthase [Arabi...   140    2e-33 
gi|115480417|ref|NP_001063802.1|  Os09g0539100 [Oryza sativa (...   132    5e-31 
gi|57283679|emb|CAG30727.1|  arob [Hordeum vulgare]                 129    4e-30
gi|10177127|dbj|BAB10417.1|  3-dehydroquinate synthase-like prote   129    6e-30
gi|55792530|gb|AAV65361.1|  plastid 3-dehydroquinate synthase [Pr  85.9    7e-17
gi|116057735|emb|CAL53938.1|  Pentafunctional AROM protein (ISS)   82.8    6e-16
gi|30698194|ref|NP_851279.1|  3-dehydroquinate synthase [Arabidop  79.3    7e-15 
gi|18408679|ref|NP_564888.1|  unknown protein [Arabidopsis tha...  31.6    1.6   
gi|115479713|ref|NP_001063450.1|  Os09g0473400 [Oryza sativa (...  29.3    7.8

Alignments

 

>gi|76782192|gb|ABA54866.1|  putative 3-dehydroquinate synthase [Fagus sylvatica]
Length=459

 Score =  167 bits (422),  Expect = 2e-41
 Identities = 92/142 (64%), Positives = 109/142 (76%), Gaps = 7/142 (4%)
 Frame = -3

Query  407  NSSYFFLRV-NKPAKVSFRGS----SSGELNPGRV--ALSRPSGIRGRICATAIPVMDQS  249
            +SS  FLRV N P  VS R S    SS ELN  RV  ++S  S ++ RICA++  VMDQS
Sbjct  27   HSSDSFLRVQNPPNSVSLRSSFISPSSIELNLNRVGNSISSASRVKSRICASSAQVMDQS  86

Query  248  VGEKSSKAPTIVEVDLGNRSYPIYIGSGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDK  69
            V +    APTIV+V+LGNRSYPIYIG GLL++P LLQKHVHGK+VLVVTN  + PLYLDK
Sbjct  87   VTKSDPTAPTIVDVNLGNRSYPIYIGPGLLDQPHLLQKHVHGKRVLVVTNDKVGPLYLDK  146

Query  68   VVDALTKGNPNISVENVILPDG  3
            VV+ALTKGNPN+SVE+VILPDG
Sbjct  147  VVEALTKGNPNVSVESVILPDG  168


>gi|18654278|gb|AAL77575.1|L46847_1  dehydroquinate synthase [Lycopersicon esculentum]
Length=442

 Score =  145 bits (365),  Expect = 1e-34
 Identities = 76/130 (58%), Positives = 95/130 (73%), Gaps = 9/130 (6%)
 Frame = -3

Query  389  LRVNKPAKVSFRGSSSGELNPGRVALSRPSGIRGRICAT-AIPVMDQSVGEKSSKAPTIV  213
            + V  PA VS   S  G        L   +  R ++ AT A  VMD S  + SS+APT+V
Sbjct  30   IHVRFPAPVSSPSSRCG--------LKSKATTRLKVLATSATKVMDHSSSKASSQAPTVV  81

Query  212  EVDLGNRSYPIYIGSGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDKVVDALTKGNPNI  33
            EVDLG RSYPIYIG+GLL++P+LLQ+H+HGK+VLVVTNTT+APLYLDK + ALT GNPN+
Sbjct  82   EVDLGTRSYPIYIGAGLLDQPDLLQRHIHGKRVLVVTNTTVAPLYLDKTISALTDGNPNV  141

Query  32   SVENVILPDG  3
            +VE+VILPDG
Sbjct  142  TVESVILPDG  151


>gi|21537014|gb|AAM61355.1|  3-dehydroquinate synthase-like protein [Arabidopsis thaliana]
Length=442

 Score =  140 bits (354),  Expect = 2e-33
 Identities = 68/116 (58%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = -3

Query  347  SSGELNPGRVALSRPSGIRGRICATAIPVMDQSVGEKSS-KAPTIVEVDLGNRSYPIYIG  171
            +S +  PG ++LS  +  R R+ A A  +M++ + ++ S  +PT+VEVDLG+RSYPIYIG
Sbjct  36   ASAKSKPGELSLSSTTLSRSRVRAGASQLMNEPLNDQRSISSPTVVEVDLGDRSYPIYIG  95

Query  170  SGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDKVVDALTKGNPNISVENVILPDG  3
            +GLL+  ELLQ+HVHGK+VLVVTN  +APLYLDK +DALT+GNPN++VE+VILPDG
Sbjct  96   AGLLDHSELLQRHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDG  151


>gi|18425036|ref|NP_569029.1|  3-dehydroquinate synthase [Arabidopsis thaliana]
 gi|17978956|gb|AAL47443.1|  AT5g66120/K2A18_20 [Arabidopsis thaliana]
 gi|22655384|gb|AAM98284.1|  At5g66120/K2A18_20 [Arabidopsis thaliana]
Length=442

 Score =  140 bits (354),  Expect = 2e-33
 Identities = 68/116 (58%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = -3

Query  347  SSGELNPGRVALSRPSGIRGRICATAIPVMDQSVGEKSS-KAPTIVEVDLGNRSYPIYIG  171
            +S +  PG ++LS  +  R R+ A A  +M++ + ++ S  +PT+VEVDLG+RSYPIYIG
Sbjct  36   ASAKSKPGELSLSSTTLSRSRVRAGASQLMNEPLNDQRSISSPTVVEVDLGDRSYPIYIG  95

Query  170  SGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDKVVDALTKGNPNISVENVILPDG  3
            +GLL+  ELLQ+HVHGK+VLVVTN  +APLYLDK +DALT+GNPN++VE+VILPDG
Sbjct  96   AGLLDHSELLQRHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDG  151


>gi|115480417|ref|NP_001063802.1|  Os09g0539100 [Oryza sativa (japonica cultivar-group)]
 gi|52076054|dbj|BAD46567.1|  putative dehydroquinate synthase [Oryza sativa (japonica cultivar-group)]
 gi|113632035|dbj|BAF25716.1|  Os09g0539100 [Oryza sativa (japonica cultivar-group)]
Length=443

 Score =  132 bits (333),  Expect = 5e-31
 Identities = 64/98 (65%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
 Frame = -3

Query  296  IRGRICATAIPVMDQSVGEKSSKAPTIVEVDLGNRSYPIYIGSGLLEEPELLQKHVHGKK  117
            +R R+ A+A P M       +S+  T+V+VDLG+RSYPIYIG+GLL+EP+LLQ+HVHGK+
Sbjct  58   LRSRVVASAAPAMQPP---PASRVSTVVDVDLGDRSYPIYIGAGLLDEPDLLQRHVHGKR  114

Query  116  VLVVTNTTIAPLYLDKVVDALTKGNPNISVENVILPDG  3
            VLVVTNTT+APLYL+KV  ALT  NPN+SVE+VILPDG
Sbjct  115  VLVVTNTTVAPLYLEKVTWALTHNNPNVSVESVILPDG  152


>gi|57283679|emb|CAG30727.1|  arob [Hordeum vulgare]
Length=156

 Score =  129 bits (325),  Expect = 4e-30
 Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 11/142 (7%)
 Frame = -3

Query  410  ANSSYFFLRVNKP------AKVSFRGSSSGELNPGRVALSRPSGIRGRICATAIPVMDQS  249
            ++SS   + V +P      A  S   SS     P R + +R   +R R+ A+A P M   
Sbjct  14   SSSSRAAISVRRPRAAPAAAAASVPSSSRSSFTPLRASPAR--ALRSRVVASAAPAMQPP  71

Query  248  VGEKSSKAPTIVEVDLGNRSYPIYIGSGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDK  69
                 S+  T+V+VDLG+RSYPIYIG GLL EP+LLQ+HV GK+VLVVTNTT+APLYL+K
Sbjct  72   A---VSRVSTVVDVDLGDRSYPIYIGPGLLNEPDLLQRHVIGKRVLVVTNTTVAPLYLEK  128

Query  68   VVDALTKGNPNISVENVILPDG  3
            V  ALT  NPN+SVE+VILPDG
Sbjct  129  VTWALTHQNPNVSVESVILPDG  150


>gi|10177127|dbj|BAB10417.1|  3-dehydroquinate synthase-like protein [Arabidopsis thaliana]
Length=378

 Score =  129 bits (324),  Expect = 6e-30
 Identities = 58/80 (72%), Positives = 73/80 (91%), Gaps = 0/80 (0%)
 Frame = -3

Query  242  EKSSKAPTIVEVDLGNRSYPIYIGSGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDKVV  63
            ++S  +PT+VEVDLG+RSYPIYIG+GLL+  ELLQ+HVHGK+VLVVTN  +APLYLDK +
Sbjct  8    QRSISSPTVVEVDLGDRSYPIYIGAGLLDHSELLQRHVHGKRVLVVTNDRVAPLYLDKTI  67

Query  62   DALTKGNPNISVENVILPDG  3
            DALT+GNPN++VE+VILPDG
Sbjct  68   DALTRGNPNVTVESVILPDG  87


>gi|55792530|gb|AAV65361.1|  plastid 3-dehydroquinate synthase [Prototheca wickerhamii]
Length=231

 Score = 85.9 bits (211),  Expect = 7e-17
 Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 0/71 (0%)
 Frame = -3

Query  215  VEVDLGNRSYPIYIGSGLLEEPELLQKHVHGKKVLVVTNTTIAPLYLDKVVDALTKGNPN  36
            VEV LG R+YPIYIG GLL + ELL++H+ G   L+VTN T++ LYLD  + AL  GN  
Sbjct  77   VEVGLGTRTYPIYIGRGLLRQGELLRRHIVGSSALIVTNQTVSKLYLDATLAALRGGNSG  136

Query  35   ISVENVILPDG  3
            + VE+V+LPDG
Sbjct  137  LRVESVVLPDG  147


>gi|116057735|emb|CAL53938.1|  Pentafunctional AROM protein (ISS) [Ostreococcus tauri]
Length=416

 Score = 82.8 bits (203),  Expect = 6e-16
 Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
 Frame = -3

Query  326  GRVALSRPSGIRGRICATAIPVMDQSVGEKSSKAPTIVEVDLGNRSYPIYIGSGLLEEPE  147
            G+    R  G+R  I      V  ++       A T V VDLG+RSYPI IGSGLL++  
Sbjct  18   GKTCAQRCPGVRSMIARRRALVTPRASSTAKEAAAT-VRVDLGDRSYPILIGSGLLDDGV  76

Query  146  LLQKHVHGKKVLVVTNTTIAPL-YLDKVVDALTKGNPNISVENVILPDG  3
             L++HV     LVVTN TIA L YL++ V AL  G+  I VE V+LPDG
Sbjct  77   ALREHVTSSTALVVTNETIAKLGYLERTVKALEGGDEKIRVETVVLPDG  125


>gi|30698194|ref|NP_851279.1|  3-dehydroquinate synthase [Arabidopsis thaliana]
Length=338

 Score = 79.3 bits (194),  Expect = 7e-15
 Identities = 34/45 (75%), Positives = 42/45 (93%), Gaps = 0/45 (0%)
 Frame = -3

Query  137  KHVHGKKVLVVTNTTIAPLYLDKVVDALTKGNPNISVENVILPDG  3
            +HVHGK+VLVVTN  +APLYLDK +DALT+GNPN++VE+VILPDG
Sbjct  3    RHVHGKRVLVVTNDRVAPLYLDKTIDALTRGNPNVTVESVILPDG  47


>gi|18408679|ref|NP_564888.1|  unknown protein [Arabidopsis thaliana]
 gi|9755454|gb|AAF98215.1|AC007152_11  Unknown protein [Arabidopsis thaliana]
 gi|20260172|gb|AAM12984.1|  unknown protein [Arabidopsis thaliana]
 gi|21537236|gb|AAM61577.1|  unknown [Arabidopsis thaliana]
 gi|22136262|gb|AAM91209.1|  unknown protein [Arabidopsis thaliana]
Length=264

 Score = 31.6 bits (70),  Expect = 1.6
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query  292  LIPLGLDKATRPGFNSPELEPRKETLAGLLTRRKK*EELAFKSDDDLVLILEERERDKAF  471
            ++P  + K   PG   PE +P K        R++  EE   + +DD+++  EE+   K+F
Sbjct  81   ILPTEIKKKPEPGKKEPEPKPVKSKPDSRKQRKQPNEE---QQEDDVIITTEEKTNTKSF  137


>gi|115479713|ref|NP_001063450.1|  Os09g0473400 [Oryza sativa (japonica cultivar-group)]
 gi|47848393|dbj|BAD22252.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|50726618|dbj|BAD34338.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113631683|dbj|BAF25364.1|  Os09g0473400 [Oryza sativa (japonica cultivar-group)]
Length=399

 Score = 29.3 bits (64),  Expect = 7.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 0/54 (0%)
 Frame = +1

Query  193  RLPKSTSTIVGALELFSPTD*SITGIAVAQILPLIPLGLDKATRPGFNSPELEP  354
            RL  +T  ++ A+   SP+  +    A A +LPL+P    +  R   +SP + P
Sbjct  4    RLFSATRALLRAVPSPSPSSSAAAAAAAASLLPLLPCKRRRKLRKKLSSPRVAP  57

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 403
Number of extensions: 9
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 505
Length of database: 101054579
Length adjustment: 105
Effective length of query: 400
Effective length of database: 71302934
Effective search space: 4492084842
Effective search space used: 4492084842
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)