RID=1168938641-6357-48043601017.BLASTQ4, Contig223

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938641-6357-48043601017.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig223
Length=307

Distribution of 26 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18418200|ref|NP_568342.1|  electron transporter/ metal ion ...   124    1e-28 
gi|115474927|ref|NP_001061060.1|  Os08g0162600 [Oryza sativa (...   119    4e-27 
gi|116058462|emb|CAL53651.1|  PREDICTED P0577B11.138 gene prod...   107    1e-23
gi|115485721|ref|NP_001068004.1|  Os11g0528500 [Oryza sativa (...  68.2    8e-12 
gi|18423226|ref|NP_568749.1|  electron transporter/ metal ion ...  63.9    2e-10 
gi|92871093|gb|ABE80208.1|  Rubredoxin-type Fe(Cys)4 protein [Med  63.2    3e-10
gi|116059991|emb|CAL56050.1|  NADH-cytochrome b-5 reductase (ISS)  53.5    2e-07
gi|116058047|emb|CAL54250.1|  unnamed protein product [Ostreococc  46.6    3e-05
gi|92877226|gb|ABE84397.1|  FAR1; Zinc finger, SWIM-type [Medi...  31.2    1.1  
gi|92867976|gb|ABE78086.1|  cdc2-like protein kinase cdc2MsC -...  30.0    2.5  
gi|116058351|emb|CAL53540.1|  Transcription initiation factor ...  29.6    3.3  
gi|115454437|ref|NP_001050819.1|  Os03g0659400 [Oryza sativa (...  29.6    3.3   
gi|115475890|ref|NP_001061541.1|  Os08g0323400 [Oryza sativa (...  29.6    3.3   
gi|116060586|emb|CAL55922.1|  unnamed protein product [Ostreococc  29.3    4.3  
gi|92886795|gb|ABE88489.1|  hypothetical protein MtrDRAFT_AC15...  29.3    4.3  
gi|116060396|emb|CAL55732.1|  Phosphatidylserine synthase (ISS) [  28.9    5.7  
gi|56566432|gb|AAV98402.1|  plastid histidinol-phosphate trans...  28.9    5.7  
gi|112819498|gb|ABI23729.1|  putative rubredoxin [Musa acuminata]  28.5    7.4  
gi|18395319|ref|NP_027420.1|  nucleic acid binding [Arabidopsi...  28.5    7.4   
gi|20466824|gb|AAM20729.1|  unknown protein [Arabidopsis thaliana  28.5    7.4   
gi|7230637|gb|AAF43040.1|AF233430_1  EYE2 [Chlamydomonas reinhard  28.5    7.4  
gi|16604651|gb|AAL24118.1|  unknown protein [Arabidopsis thaliana  28.5    7.4   
gi|115486049|ref|NP_001068168.1|  Os11g0586300 [Oryza sativa (...  28.1    9.7   
gi|110289448|gb|AAP54692.2|  retrotransposon protein, putative...  28.1    9.7  
gi|77551654|gb|ABA94451.1|  expressed protein [Oryza sativa (japo  28.1    9.7  
gi|27311287|gb|AAO00713.1|  retrotransposon protein, putative,...  28.1    9.7

Alignments

 

>gi|18418200|ref|NP_568342.1|  electron transporter/ metal ion binding / protein binding [Arabidopsis 
thaliana]
 gi|10177062|dbj|BAB10504.1|  unnamed protein product [Arabidopsis thaliana]
 gi|14334892|gb|AAK59624.1|  unknown protein [Arabidopsis thaliana]
 gi|24030464|gb|AAN41384.1|  unknown protein [Arabidopsis thaliana]
Length=271

 Score =  124 bits (311),  Expect = 1e-28
 Identities = 55/63 (87%), Positives = 57/63 (90%), Gaps = 0/63 (0%)
 Frame = -1

Query  307  PAPPRFGRKLTEAQKARASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRFAKYDVN  128
            PAPPRFGRKLTE QKARA+HICLDCG+IYT  K FDEQPDTY CPQC APKKRFAKYDVN
Sbjct  178  PAPPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKYDVN  237

Query  127  TGK  119
            TGK
Sbjct  238  TGK  240


>gi|115474927|ref|NP_001061060.1|  Os08g0162600 [Oryza sativa (japonica cultivar-group)]
 gi|28564642|dbj|BAC57824.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|37806461|dbj|BAC99896.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113623029|dbj|BAF22974.1|  Os08g0162600 [Oryza sativa (japonica cultivar-group)]
Length=260

 Score =  119 bits (297),  Expect = 4e-27
 Identities = 51/63 (80%), Positives = 55/63 (87%), Gaps = 0/63 (0%)
 Frame = -1

Query  307  PAPPRFGRKLTEAQKARASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRFAKYDVN  128
            PAPPRFGRKLTE+QKARA+HICLDCGYIY   KPF+EQPD Y CPQC APKKRFAKYD  
Sbjct  167  PAPPRFGRKLTESQKARATHICLDCGYIYFLPKPFEEQPDEYGCPQCNAPKKRFAKYDAE  226

Query  127  TGK  119
            TG+
Sbjct  227  TGR  229


>gi|116058462|emb|CAL53651.1|  PREDICTED P0577B11.138 gene product [Oryza sativa (ISS) [Ostreococcus 
tauri]
Length=230

 Score =  107 bits (267),  Expect = 1e-23
 Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 0/63 (0%)
 Frame = -1

Query  307  PAPPRFGRKLTEAQKARASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRFAKYDVN  128
            PAPP+FGRKL+ AQK RASHIC+DCGY+YT   PF EQP +Y CPQC APK RFA YDV 
Sbjct  137  PAPPKFGRKLSAAQKERASHICVDCGYVYTLPTPFGEQPKSYVCPQCNAPKSRFAPYDVE  196

Query  127  TGK  119
            TG+
Sbjct  197  TGR  199


>gi|115485721|ref|NP_001068004.1|  Os11g0528500 [Oryza sativa (japonica cultivar-group)]
 gi|77551234|gb|ABA94031.1|  Rubredoxin family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113645226|dbj|BAF28367.1|  Os11g0528500 [Oryza sativa (japonica cultivar-group)]
Length=151

 Score = 68.2 bits (165),  Expect = 8e-12
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
 Frame = -1

Query  307  PAPPRFGRKLTEAQK---------ARASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPK  155
            PAPPR G + + A           ++ ++IC DCGYIY+ + PFD+ PD Y CP C APK
Sbjct  33   PAPPRRGARASTASARITMRFGVASKQAYICRDCGYIYSDRTPFDKLPDKYFCPVCGAPK  92

Query  154  KRFAKYDVNTGK  119
            +RF  Y+    K
Sbjct  93   RRFKPYEPKVAK  104


>gi|18423226|ref|NP_568749.1|  electron transporter/ metal ion binding [Arabidopsis thaliana]
 gi|9758248|dbj|BAB08747.1|  unnamed protein product [Arabidopsis thaliana]
 gi|15292669|gb|AAK92703.1|  unknown protein [Arabidopsis thaliana]
 gi|19310697|gb|AAL85079.1|  unknown protein [Arabidopsis thaliana]
 gi|21555410|gb|AAM63852.1|  unknown [Arabidopsis thaliana]
Length=154

 Score = 63.9 bits (154),  Expect = 2e-10
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
 Frame = -1

Query  298  PRFGRKLTEAQKARASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRFAKYDVNTGK  119
            PRF  +++  Q    ++IC DCGYIY  + PFD+ PD Y CP C APK+RF  Y  +  K
Sbjct  52   PRFSMRVSSKQ----AYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAYMPDVSK  107


>gi|92871093|gb|ABE80208.1|  Rubredoxin-type Fe(Cys)4 protein [Medicago truncatula]
Length=159

 Score = 63.2 bits (152),  Expect = 3e-10
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
 Frame = -1

Query  301  PPRFGRKLTEAQKARASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRFAKYDVNTG  122
            PPRF  ++   Q    ++IC DCGYIY  +  FD+ PD Y CP C APK+RF  Y  +  
Sbjct  56   PPRFTMRVASKQ----AYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVN  111

Query  121  K  119
            K
Sbjct  112  K  112


>gi|116059991|emb|CAL56050.1|  NADH-cytochrome b-5 reductase (ISS) [Ostreococcus tauri]
Length=986

 Score = 53.5 bits (127),  Expect = 2e-07
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 0/38 (0%)
 Frame = -1

Query  259  RASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRF  146
            +A+HIC  CGYIY   K F+E P  Y CP C APK +F
Sbjct  659  KATHICTACGYIYQETKKFNELPADYVCPSCSAPKTKF  696


>gi|116058047|emb|CAL54250.1|  unnamed protein product [Ostreococcus tauri]
Length=131

 Score = 46.6 bits (109),  Expect = 3e-05
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -1

Query  292  FGRKLTEAQKA----RASHICLDCGYIYTAQKPFDEQPDTYACPQCRAPKKRF  146
            FG+K T         R  ++C+DCGY+YT    F + P++Y CP C   K RF
Sbjct  22   FGKKTTPGGSGGVVDRTPYLCIDCGYVYTG-GDFKKLPNSYRCPTCNVGKNRF  73


>gi|92877226|gb|ABE84397.1|  FAR1; Zinc finger, SWIM-type [Medicago truncatula]
 gi|92898896|gb|ABE94415.1|  FAR1; Zinc finger, SWIM-type [Medicago truncatula]
Length=699

 Score = 31.2 bits (69),  Expect = 1.1
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query  113  NSFASIHIIFCKSLLWCSTLRACISIRLLIKRFLCSVYVSTVKTNMTSSCLLSLSQFPSK  292
            N+   ++ ++ KS  +CS   ACI +      FL S  V  V+ N++    L +  F  K
Sbjct  353  NAQTHVNHLYQKSSKFCSDFEACIDLHEEEGEFLNSWNVLLVEHNVSEDSWLRMI-FQLK  411

Query  293  ARWCW  307
             +W W
Sbjct  412  EKWAW  416


>gi|92867976|gb|ABE78086.1|  cdc2-like protein kinase cdc2MsC - alfalfa-related [Medicago 
truncatula]
Length=309

 Score = 30.0 bits (66),  Expect = 2.5
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
 Frame = -3

Query  128  YWQSYWWRVTPNW----CHYWADSWCWSCWSF  45
            +W S WWR   +W       W+  W   CWS+
Sbjct  259  WWWSAWWRWLWSWNSKLSSRWSSIWWIGCWSW  290


>gi|116058351|emb|CAL53540.1|  Transcription initiation factor TFIIIB, Brf1 subunit (ISS) [Ostreococcus 
tauri]
Length=601

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 0/31 (0%)
 Frame = -1

Query  307  PAPPRFGRKLTEAQKARASHICLDCGYIYTA  215
            PA P  GR   + + A  S IC  CG +Y A
Sbjct  15   PACPNCGRDAIKLEPALGSEICQSCGAVYRA  45


>gi|115454437|ref|NP_001050819.1|  Os03g0659400 [Oryza sativa (japonica cultivar-group)]
 gi|27764684|gb|AAO23109.1|  putative DNA-binding protein [Oryza sativa (japonica cultivar-group)]
 gi|108710206|gb|ABF98001.1|  Zinc knuckle family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113549290|dbj|BAF12733.1|  Os03g0659400 [Oryza sativa (japonica cultivar-group)]
Length=697

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
 Frame = -1

Query  295  RFGRKLTEAQKARASHICLDCG----YIYTAQKPFDEQPDTYACPQCRAP  158
            R+G    E +     ++C  CG    +I   Q+     P  Y C +CR P
Sbjct  160  RYGHGPVEGETPPPGYVCRSCGVPGHFIQHCQQERKTPPSGYVCYRCRIP  209


>gi|115475890|ref|NP_001061541.1|  Os08g0323400 [Oryza sativa (japonica cultivar-group)]
 gi|38637405|dbj|BAD03663.1|  putative rubredoxin [Oryza sativa (japonica cultivar-group)]
 gi|113623510|dbj|BAF23455.1|  Os08g0323400 [Oryza sativa (japonica cultivar-group)]
Length=217

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 11/49 (22%)
 Frame = -1

Query  244  CLDCGYIYTAQK-----------PFDEQPDTYACPQCRAPKKRFAKYDV  131
            C  CGY Y               PF++ PD + CP C A +  F    V
Sbjct  124  CRSCGYRYDQAAGDPSYPVPPGLPFEQLPDDWRCPTCGAAQSFFESKSV  172


>gi|116060586|emb|CAL55922.1|  unnamed protein product [Ostreococcus tauri]
Length=1120

 Score = 29.3 bits (64),  Expect = 4.3
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query  92   WCHYWADSWCWSCWSF-TCLW  33
            WC +W   W W CW + +C W
Sbjct  311  WCCHWC--WSWPCWCWCSCRW  329


>gi|92886795|gb|ABE88489.1|  hypothetical protein MtrDRAFT_AC150787g17v1 [Medicago truncatula]
Length=182

 Score = 29.3 bits (64),  Expect = 4.3
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query  113  NSFASIHIIFCKSLLWCSTLRACISIRLLIKRFLCSVYVSTVKTNMTSSCLLSLSQFPSK  292
            N+   ++ ++ +S  +CS  +ACI +    + FL       V+ N++    L  + F  K
Sbjct  105  NALRHVNHLYQRSSQFCSDFKACIDLHEKEEEFLSGWETLLVEHNVSKDSWLH-TIFRFK  163

Query  293  ARWCW  307
             +W W
Sbjct  164  EKWTW  168


>gi|116060396|emb|CAL55732.1|  Phosphatidylserine synthase (ISS) [Ostreococcus tauri]
Length=470

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 7/31 (22%)
 Frame = -3

Query  152  EICKI*CEYWQSYWWRVTPNWCHYWADSWCW  60
            E+C+I  E+WQ       PN+   W D W W
Sbjct  177  ELCEITFEHWQ-------PNFNECWWDMWVW  200


>gi|56566432|gb|AAV98402.1|  plastid histidinol-phosphate transaminase [Prototheca wickerhamii]
Length=221

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -3

Query  65   CWSCWSFTCLW  33
            CWSCWS  C W
Sbjct  206  CWSCWSCRCWW  216


>gi|112819498|gb|ABI23729.1|  putative rubredoxin [Musa acuminata]
Length=78

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 11/49 (22%)
 Frame = -1

Query  244  CLDCGYIY--TAQKP---------FDEQPDTYACPQCRAPKKRFAKYDV  131
            C  CGY Y   A  P         F++ PD + CP C A K  F    V
Sbjct  12   CRSCGYRYDEAAGDPSYPIPPGFQFEKLPDDWRCPTCGAAKSFFESKSV  60


>gi|18395319|ref|NP_027420.1|  nucleic acid binding [Arabidopsis thaliana]
 gi|4038036|gb|AAC97218.1|  expressed protein [Arabidopsis thaliana]
 gi|24030234|gb|AAN41294.1|  unknown protein [Arabidopsis thaliana]
Length=669

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
 Frame = -3

Query  134  CEYWQSYWWRVTPNWCHYWADSWC  63
            CEY  S + R+ P  C+YW +  C
Sbjct  51   CEYRHSEYARMNPRDCYYWLNGNC  74


>gi|20466824|gb|AAM20729.1|  unknown protein [Arabidopsis thaliana]
Length=618

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
 Frame = -3

Query  134  CEYWQSYWWRVTPNWCHYWADSWC  63
            CEY  S + R+ P  C+YW +  C
Sbjct  51   CEYRHSEYARMNPRDCYYWLNGNC  74


>gi|7230637|gb|AAF43040.1|AF233430_1  EYE2 [Chlamydomonas reinhardtii]
Length=503

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 9/44 (20%)
 Frame = -3

Query  125  WQSYWWRVTPNWCHYWADSWCWSC---------WSFTCLWPSMK  21
            W + W      W H W   W W+          WS  CL P  +
Sbjct  348  WAACWGCCCARWAHAWRWCWGWAATRRHRPQPQWSQPCLPPQRR  391


>gi|16604651|gb|AAL24118.1|  unknown protein [Arabidopsis thaliana]
Length=669

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
 Frame = -3

Query  134  CEYWQSYWWRVTPNWCHYWADSWC  63
            CEY  S + R+ P  C+YW +  C
Sbjct  51   CEYRHSEYARMNPRDCYYWLNGNC  74


>gi|115486049|ref|NP_001068168.1|  Os11g0586300 [Oryza sativa (japonica cultivar-group)]
 gi|113645390|dbj|BAF28531.1|  Os11g0586300 [Oryza sativa (japonica cultivar-group)]
Length=537

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
 Frame = -3

Query  131  EYWQSYWWR--VTPNWCHYWADSWC  63
            E WQ  WW    +      WAD WC
Sbjct  364  EQWQEQWWEHYDSSGKAEKWADKWC  388


>gi|110289448|gb|AAP54692.2|  retrotransposon protein, putative, unclassified [Oryza sativa 
(japonica cultivar-group)]
Length=1585

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 0/25 (0%)
 Frame = -3

Query  110   WRVTPNWCHYWADSWCWSCWSFTCL  36
             WR      + W  S CW  W  TC+
Sbjct  1002  WRFLEQSMYKWGFSHCWVSWVMTCI  1026


>gi|77551654|gb|ABA94451.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=618

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
 Frame = -3

Query  131  EYWQSYWWR--VTPNWCHYWADSWC  63
            E WQ  WW    +      WAD WC
Sbjct  445  EQWQEQWWEHYDSSGKAEKWADKWC  469


>gi|27311287|gb|AAO00713.1|  retrotransposon protein, putative, unclassified [Oryza sativa 
(japonica cultivar-group)]
Length=1557

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 0/25 (0%)
 Frame = -3

Query  110  WRVTPNWCHYWADSWCWSCWSFTCL  36
            WR      + W  S CW  W  TC+
Sbjct  974  WRFLEQSMYKWGFSHCWVSWVMTCI  998

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 195
Number of extensions: 3
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 307
Length of database: 101054579
Length adjustment: 71
Effective length of query: 236
Effective length of database: 80936800
Effective search space: 2509040800
Effective search space used: 2509040800
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)