RID=1168939608-14614-118295072314.BLASTQ4, Contig249

Alignments
 

>gi|8886929|gb|AAF80615.1|AC069251_8  F2D10.18 [Arabidopsis thaliana]
Length=662

 Score =  180 bits (457),  Expect = 3e-45
 Identities = 88/121 (72%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +1

Query  64   QPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  243
            QP   MKG KSK++T+S+KLSV KKPA KG  +   A KDPNKPKRPASAFFVFME+FRE
Sbjct  373  QPESIMKGAKSKTETRSSKLSVTKKPA-KGAGRGKAAAKDPNKPKRPASAFFVFMEDFRE  431

Query  244  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGP  423
             +KK++PKNKSVA VGKA GDKWKS+S++EKAP+VAKAEKRKVEYEKN+KAYNK+  EGP
Sbjct  432  TFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGP  491

Query  424  Q  426
            +
Sbjct  492  K  492


 Score =  175 bits (444),  Expect = 1e-43
 Identities = 86/116 (74%), Positives = 102/116 (87%), Gaps = 4/116 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG KSK++T+S KLSV KKPA KG +    A KDPNKPKRP+SAFFVFME+FR  YK++
Sbjct  522  MKGAKSKAETRSTKLSVTKKPA-KGAKG---AAKDPNKPKRPSSAFFVFMEDFRVTYKEE  577

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGPQ  426
            HPKNKSVAAVGKAGG+KWKS+S++EKAP+VAKA+KRKVEYEKNMKAYNK+  EGP+
Sbjct  578  HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPK  633


>gi|79318286|ref|NP_001031074.1|  HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis thaliana]
Length=142

 Score =  178 bits (452),  Expect = 1e-44
 Identities = 86/116 (74%), Positives = 102/116 (87%), Gaps = 1/116 (0%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG KSK++T+S+KLSV KKPA KG  +   A KDPNKPKRPASAFFVFME+FRE +KK+
Sbjct  1    MKGAKSKTETRSSKLSVTKKPA-KGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKE  59

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGPQ  426
            +PKNKSVA VGKA GDKWKS+S++EKAP+VAKAEKRKVEYEKN+KAYNK+  EGP+
Sbjct  60   NPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPK  115


>gi|18394898|ref|NP_564123.1|  HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor [Arabidopsis 
thaliana]
 gi|13877971|gb|AAK44063.1|AF370248_1  unknown protein [Arabidopsis thaliana]
 gi|2832359|emb|CAA74401.1|  HMG protein [Arabidopsis thaliana]
 gi|17104699|gb|AAL34238.1|  unknown protein [Arabidopsis thaliana]
 gi|21536964|gb|AAM61305.1|  unknown [Arabidopsis thaliana]
 gi|26452113|dbj|BAC43146.1|  unknown protein [Arabidopsis thaliana]
Length=144

 Score =  178 bits (452),  Expect = 1e-44
 Identities = 86/116 (74%), Positives = 102/116 (87%), Gaps = 1/116 (0%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG KSK++T+S+KLSV KKPA KG  +   A KDPNKPKRPASAFFVFME+FRE +KK+
Sbjct  1    MKGAKSKTETRSSKLSVTKKPA-KGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKE  59

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGPQ  426
            +PKNKSVA VGKA GDKWKS+S++EKAP+VAKAEKRKVEYEKN+KAYNK+  EGP+
Sbjct  60   NPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPK  115


>gi|18394900|ref|NP_564124.1|  HMGB3 (HIGH MOBILITY GROUP B 3); transcription factor [Arabidopsis 
thaliana]
 gi|15724174|gb|AAL06479.1|AF411789_1  At1g20690/F2D10_15 [Arabidopsis thaliana]
 gi|1694976|emb|CAA70691.1|  HMG1 [Arabidopsis thaliana]
 gi|2832361|emb|CAA74402.1|  HMG protein [Arabidopsis thaliana]
 gi|20453325|gb|AAM19901.1|  At1g20690/F2D10_15 [Arabidopsis thaliana]
 gi|21537072|gb|AAM61413.1|  unknown [Arabidopsis thaliana]
 gi|22530942|gb|AAM96975.1|  expressed protein [Arabidopsis thaliana]
 gi|23198424|gb|AAN15739.1|  expressed protein [Arabidopsis thaliana]
Length=141

 Score =  175 bits (444),  Expect = 1e-43
 Identities = 86/116 (74%), Positives = 102/116 (87%), Gaps = 4/116 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG KSK++T+S KLSV KKPA KG +    A KDPNKPKRP+SAFFVFME+FR  YK++
Sbjct  1    MKGAKSKAETRSTKLSVTKKPA-KGAKG---AAKDPNKPKRPSSAFFVFMEDFRVTYKEE  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGPQ  426
            HPKNKSVAAVGKAGG+KWKS+S++EKAP+VAKA+KRKVEYEKNMKAYNK+  EGP+
Sbjct  57   HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPK  112


>gi|123379|sp|P26585|HMGL_SOYBN  HMG1/2-like protein (SB11 protein)
 gi|18645|emb|CAA41200.1|  HMG-1 like protein gene [Glycine max]
Length=152

 Score =  172 bits (437),  Expect = 7e-43
 Identities = 86/120 (71%), Positives = 102/120 (85%), Gaps = 5/120 (4%)
 Frame = +1

Query  79   MKGGKSKSDTKSA--KLSVNKKPATKGGRK---SGKAVKDPNKPKRPASAFFVFMEEFRE  243
            MKGGKSK+++K A  KL+VNKK A    RK    GKA KDPNKPKRP SAFFVFMEEFR+
Sbjct  1    MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRK  60

Query  244  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGP  423
             + K+HP+NK+V+AVGKA G KWK+MS+AEKAP+VAK+EKRKVEYEKNM+AYNK+QAEGP
Sbjct  61   VFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGP  120


>gi|436424|emb|CAA54168.1|  HMG 1 protein [Pisum sativum]
Length=154

 Score =  171 bits (434),  Expect = 2e-42
 Identities = 88/123 (71%), Positives = 103/123 (83%), Gaps = 6/123 (4%)
 Frame = +1

Query  79   MKGGKSKSDTKSA--KLSVNKK--PATKGGRK--SGKAVKDPNKPKRPASAFFVFMEEFR  240
            MKGGKSK ++K A  KL+VNKK  PATKGG+K   GK  KDPNKPKRP SAFFVFME+FR
Sbjct  1    MKGGKSKGESKKAETKLAVNKKGAPATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMEDFR  60

Query  241  EQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +Q+KK +  NK+V+AVGKA G KWKSM+EAEKAP+ AKAEKRK EYEK+MK+YNK+QAEG
Sbjct  61   KQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSMKSYNKKQAEG  120

Query  421  PQA  429
            P A
Sbjct  121  PAA  123


>gi|79318295|ref|NP_001031075.1|  HMGB3 (HIGH MOBILITY GROUP B 3) [Arabidopsis thaliana]
Length=147

 Score =  169 bits (428),  Expect = 8e-42
 Identities = 83/110 (75%), Positives = 98/110 (89%), Gaps = 4/110 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG KSK++T+S KLSV KKPA KG +    A KDPNKPKRP+SAFFVFME+FR  YK++
Sbjct  1    MKGAKSKAETRSTKLSVTKKPA-KGAKG---AAKDPNKPKRPSSAFFVFMEDFRVTYKEE  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKR  408
            HPKNKSVAAVGKAGG+KWKS+S++EKAP+VAKA+KRKVEYEKNMKAYNK+
Sbjct  57   HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK  106


>gi|63020536|gb|AAY26151.1|  high mobility group protein [Cucumis sativus]
Length=146

 Score =  168 bits (425),  Expect = 2e-41
 Identities = 83/114 (72%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGGKSK   K     +  K A    +KS KA KDPNKPKRPASAFFVFMEEFR+QYKK+
Sbjct  1    MKGGKSKGAPKKTDTKLKSKSAG-ASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKE  59

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            HP NKSVAAVGKAGGDKWKSMS+AEKAP++ KAEKRK EY K+M+AYNKR AEG
Sbjct  60   HPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEG  113


>gi|729736|sp|P40619|HMGL_IPONI  HMG1/2-like protein
Length=144

 Score =  157 bits (398),  Expect = 2e-38
 Identities = 78/114 (68%), Positives = 95/114 (83%), Gaps = 3/114 (2%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGGKSK+ + + KL+V K+ A    +K+ KAVKDPNKPKRP SAFFVFME+FR+ YK+ 
Sbjct  1    MKGGKSKAKSDN-KLAVKKQAADT--KKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEK  57

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            HP NKSVA VGKAGGDKWK ++ AEKAPF++KAEKRK EYEKN++AYNK+QA G
Sbjct  58   HPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG  111


>gi|1052956|gb|AAC50019.1|  high mobility group protein 2 HMG2 [Ipomoea nil]
Length=146

 Score =  156 bits (394),  Expect = 7e-38
 Identities = 77/112 (68%), Positives = 95/112 (84%), Gaps = 3/112 (2%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGGKSK+ + + KL+V K+      +KS K+VKDPNKPKRP SAFFVFME+FR+ YK+ 
Sbjct  1    MKGGKSKAKSDN-KLAVKKRGCET--KKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEK  57

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            HP NKSVAAVGKAGGDKWK +++AEKAPF+AKAEKRK EYEK+M+AYN++QA
Sbjct  58   HPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQA  109


>gi|2196548|gb|AAB61215.1|  DNA-binding protein [Nicotiana tabacum]
Length=142

 Score =  155 bits (392),  Expect = 1e-37
 Identities = 79/112 (70%), Positives = 89/112 (79%), Gaps = 3/112 (2%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGGKSK+   S KL V KK      +K+ KA KDPNKPKRP SAFFVFMEEFR+ YK+ 
Sbjct  1    MKGGKSKAGADS-KLGVRKKATET--KKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEK  57

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            HP NKSVAAVGKAGGD WK +SEAEKAP+ AKAEKRK EY+KNM AYN++QA
Sbjct  58   HPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQA  109


>gi|729737|sp|P40620|HMGL_VICFA  HMG1/2-like protein
Length=149

 Score =  154 bits (388),  Expect = 3e-37
 Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 6/116 (5%)
 Frame = +1

Query  79   MKGGKSKSDTKSA--KLSVNKK--PATKGGRK--SGKAVKDPNKPKRPASAFFVFMEEFR  240
            MKGGKSK ++K A  KL+VNKK   ATKGG+K   GK  KDPNKPKRP SAFFVFM +FR
Sbjct  1    MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFR  60

Query  241  EQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKR  408
            EQYKKDHP NKSVAAVGKA G++WKS+SE EKAP+V +A K+K EYE  ++AYNK+
Sbjct  61   EQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK  116


>gi|1813329|dbj|BAA19156.1|  HMG-1 [Canavalia gladiata]
Length=141

 Score =  152 bits (384),  Expect = 1e-36
 Identities = 72/106 (67%), Positives = 88/106 (83%), Gaps = 0/106 (0%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+D K+A   + +K A  G ++S KA KDPNKPKRP SAFFVFM EFREQYKK+HP N
Sbjct  3    KVKADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTN  62

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKR  408
            KSVA VGKAGGDKWKS+S+AEKAPFVA+AEK+K EY+K++ AYN++
Sbjct  63   KSVAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRK  108


>gi|2894109|emb|CAA05365.1|  high mobility group protein [Solanum tuberosum]
Length=141

 Score =  149 bits (375),  Expect = 1e-35
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 3/114 (2%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG KSK+   + KL V KK AT+  +K+  A KDPNKPKRP SAFFVFMEEFR+ YK+ 
Sbjct  1    MKGAKSKAKADT-KLGVRKK-ATES-KKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEK  57

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            HP NKSVA VGKAGGDKWK +S+ EKAP+ AKAEKRK EY+KNM AYNK+ A G
Sbjct  58   HPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAG  111


>gi|115470082|ref|NP_001058640.1|  Os06g0728000 [Oryza sativa (japonica cultivar-group)]
 gi|3885888|gb|AAC78104.1|  high mobility group protein [Oryza sativa]
 gi|23345287|gb|AAN28722.1|  HMG1 protein [Oryza sativa (indica cultivar-group)]
 gi|30267833|gb|AAP21609.1|  HMGB1 [Oryza sativa (indica cultivar-group)]
 gi|54291150|dbj|BAD61823.1|  HMGB1 [Oryza sativa (japonica cultivar-group)]
 gi|113596680|dbj|BAF20554.1|  Os06g0728000 [Oryza sativa (japonica cultivar-group)]
Length=157

 Score =  141 bits (356),  Expect = 2e-33
 Identities = 75/122 (61%), Positives = 92/122 (75%), Gaps = 7/122 (5%)
 Frame = +1

Query  79   MKGGKSKSDTK-SAKLSVN----KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  243
            MKG KSK   K  AKL+V     +KPA KG  + GKA KDPNKPKR  SAFFVFMEEFR+
Sbjct  1    MKGAKSKGAAKPDAKLAVKSKGAEKPAAKG--RKGKAGKDPNKPKRAPSAFFVFMEEFRK  58

Query  244  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGP  423
            ++K+ +PKNKSVAAVGKA GD+WKS++EA+KAP+VAKA K K EY K + AYNK ++   
Sbjct  59   EFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKGESTAK  118

Query  424  QA  429
            +A
Sbjct  119  KA  120


>gi|123378|sp|P27347|MNB1B_MAIZE  DNA-binding protein MNB1B (HMG1-like protein)
 gi|22329|emb|CAA41220.1|  high mobility group protein [Zea mays]
 gi|5441502|emb|CAB46752.1|  HMGa protein [Zea mays]
 gi|22347617|gb|AAM95942.1|  nucleosome/chromatin assembly factor group D protein [Zea mays]
Length=157

 Score =  140 bits (354),  Expect = 3e-33
 Identities = 72/114 (63%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
 Frame = +1

Query  79   MKGGKSKSDTKS-AKLSVNKKPATKGGR-KSGKAVKDPNKPKRPASAFFVFMEEFREQYK  252
            MKG KSK   K+ AKL+V  K A K  + + GKA KDPNKPKR  SAFFVFMEEFR+++K
Sbjct  1    MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFK  60

Query  253  KDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            + +PKNKSVAAVGKA GD+WKS+SE++KAP+VAKA K K+EY K + AYNK ++
Sbjct  61   EKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGES  114


>gi|7446229|pir||T03640  high mobility group protein MNB1b - maize (fragment)
 gi|397396|emb|CAA46876.1|  DNA-binding protein [Zea mays]
Length=168

 Score =  140 bits (354),  Expect = 3e-33
 Identities = 72/114 (63%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
 Frame = +1

Query  79   MKGGKSKSDTKS-AKLSVNKKPATKGGR-KSGKAVKDPNKPKRPASAFFVFMEEFREQYK  252
            MKG KSK   K+ AKL+V  K A K  + + GKA KDPNKPKR  SAFFVFMEEFR+++K
Sbjct  12   MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFK  71

Query  253  KDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            + +PKNKSVAAVGKA GD+WKS+SE++KAP+VAKA K K+EY K + AYNK ++
Sbjct  72   EKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGES  125


>gi|729738|sp|P40621|HMGL_WHEAT  HMG1/2-like protein
 gi|21803|emb|CAA77641.1|  high mobility group protein [Triticum aestivum]
 gi|114145392|dbj|BAF30985.1|  high mobility globular protein [Triticum aestivum]
Length=161

 Score =  139 bits (351),  Expect = 7e-33
 Identities = 76/122 (62%), Positives = 91/122 (74%), Gaps = 7/122 (5%)
 Frame = +1

Query  79   MKGGKSKSDTKS-AKLSVN----KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  243
            MKG KSK   K+ AKL+V     +KPA KG  K GKA KDPNKPKR  SAFFVFM EFRE
Sbjct  1    MKGAKSKGAAKADAKLAVKSKGAEKPAAKG--KKGKAGKDPNKPKRAPSAFFVFMGEFRE  58

Query  244  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGP  423
            ++K+ +PKNKSVAAVGKA G++WKS+SE+EKAP+VAKA K K EY K + AYNK ++   
Sbjct  59   EFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAA  118

Query  424  QA  429
             A
Sbjct  119  AA  120


>gi|950053|emb|CAA90679.1|  HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length=160

 Score =  137 bits (346),  Expect = 3e-32
 Identities = 74/117 (63%), Positives = 89/117 (76%), Gaps = 7/117 (5%)
 Frame = +1

Query  79   MKGGKSKSDTKS-AKLSVN----KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  243
            MKG KSK   K+  KL+V     +KPA KG  K GKA KDPNKPKR  SAFFVFM EFRE
Sbjct  1    MKGAKSKGAAKADTKLAVKSKGAEKPAAKG--KKGKAGKDPNKPKRAPSAFFVFMGEFRE  58

Query  244  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            ++K+ +PKNKSVAAVGKA G++WKS+SE+EKAPFVAKA K K EY K + +YNK ++
Sbjct  59   EFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYNKGES  115


>gi|47027098|gb|AAT08762.1|  HMG transcription factor [Hyacinthus orientalis]
Length=158

 Score =  137 bits (344),  Expect = 4e-32
 Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 8/118 (6%)
 Frame = +1

Query  91   KSKSDTKS---AKLSVNKKPATKGGRK-----SGKAVKDPNKPKRPASAFFVFMEEFREQ  246
            KSK+DT +   AKLSV +K A K  +K       KAVKDPNKPKRP SAFFVFME+FR+Q
Sbjct  1    KSKADTSNKADAKLSVKRKAAEKPAKKPAPAKKSKAVKDPNKPKRPPSAFFVFMEDFRKQ  60

Query  247  YKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +K+ +P NK V+ VGKA   KWK+MS AEKAPF A+A KRK +Y K M AYNK+Q+EG
Sbjct  61   FKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFEARAAKRKADYNKVMVAYNKKQSEG  118


 Score = 30.4 bits (67),  Expect = 5.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 0/47 (0%)
 Frame = +1

Query  58   AHQPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPK  198
            A +  F+ +  K K+D     ++ NKK +  GG+KS +   D    K
Sbjct  88   AEKAPFEARAAKRKADYNKVMVAYNKKQSEGGGKKSAEEEDDEESDK  134


>gi|106879575|emb|CAJ38371.1|  HMG-protein [Plantago major]
Length=212

 Score =  134 bits (336),  Expect = 4e-31
 Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
 Frame = +1

Query  64   QPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFRE  243
            +P  D K GK K+    A     KKPA K   K  KA KDPNKPKRP SAFFVF+EEFR+
Sbjct  63   KPVDDRKVGKRKA----AAAPKVKKPAAK---KDKKAKKDPNKPKRPPSAFFVFLEEFRQ  115

Query  244  QYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQ  411
             +KK++P  K+V+AVGKAGG+KWKS+++AEKAP+ AKA KRK EYEK M AYNK+Q
Sbjct  116  TFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAYNKKQ  171


>gi|115480551|ref|NP_001063869.1|  Os09g0551600 [Oryza sativa (japonica cultivar-group)]
 gi|50726318|dbj|BAD33893.1|  putative HMGd1 [Oryza sativa (japonica cultivar-group)]
 gi|113632102|dbj|BAF25783.1|  Os09g0551600 [Oryza sativa (japonica cultivar-group)]
Length=127

 Score =  132 bits (333),  Expect = 8e-31
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 10/111 (9%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            +S+S    ++LSV K           KA KDPNKPKRP SAFFVFME+FR+ YK+ HP  
Sbjct  4    RSRSSNGDSRLSVRKT----------KAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNV  53

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGP  423
            K V+ +GKAGGDKWKSM++A+KAPFV KAEK K EY K + AYN +QA GP
Sbjct  54   KQVSVIGKAGGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQAGGP  104


>gi|42572635|ref|NP_974413.1|  HMGB1 (HIGH MOBILITY GROUP B 1) [Arabidopsis thaliana]
Length=185

 Score =  130 bits (328),  Expect = 3e-30
 Identities = 69/121 (57%), Positives = 82/121 (67%), Gaps = 8/121 (6%)
 Frame = +1

Query  58   AHQPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEF  237
            A +P  D K GK K+  +        KP  +  RK  KA KDPNKPKR  SAFFVF+E+F
Sbjct  16   ALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDF  67

Query  238  REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            R  +KK++P  K+V+AVGKAGG KWKSMS+AEKAP+  KA KRK EYEK M AYNK   E
Sbjct  68   RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEE  127

Query  418  G  420
            G
Sbjct  128  G  128


>gi|15231065|ref|NP_190756.1|  HMGB1 (HIGH MOBILITY GROUP B 1); transcription factor [Arabidopsis 
thaliana]
 gi|2832357|emb|CAA74400.1|  HMG protein [Arabidopsis thaliana]
 gi|3068715|gb|AAC14415.1|  unknown [Arabidopsis thaliana]
 gi|15912191|gb|AAL08229.1|  At3g51880/ORF13 [Arabidopsis thaliana]
 gi|21360557|gb|AAM47475.1|  At3g51880/ORF13 [Arabidopsis thaliana]
Length=178

 Score =  130 bits (328),  Expect = 3e-30
 Identities = 69/121 (57%), Positives = 82/121 (67%), Gaps = 8/121 (6%)
 Frame = +1

Query  58   AHQPGFDMKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEF  237
            A +P  D K GK K+  +        KP  +  RK  KA KDPNKPKR  SAFFVF+E+F
Sbjct  16   ALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDF  67

Query  238  REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            R  +KK++P  K+V+AVGKAGG KWKSMS+AEKAP+  KA KRK EYEK M AYNK   E
Sbjct  68   RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEE  127

Query  418  G  420
            G
Sbjct  128  G  128


>gi|18419623|gb|AAL69379.1|AF462216_1  HMG-domain containing protein [Narcissus pseudonarcissus]
Length=106

 Score =  130 bits (327),  Expect = 4e-30
 Identities = 68/106 (64%), Positives = 78/106 (73%), Gaps = 7/106 (6%)
 Frame = +1

Query  79   MKGGKSKSDTKS---AKLSVNKKPATKGGRK----SGKAVKDPNKPKRPASAFFVFMEEF  237
            MKGGKSK+DT     A+LSV +K A K  +K      KA KDPNKPKRP SAFFVFMEEF
Sbjct  1    MKGGKSKADTSKKADARLSVKRKAAEKPAKKPVVKKSKAEKDPNKPKRPPSAFFVFMEEF  60

Query  238  REQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVE  375
            R+Q+K+ +P NK V+ VGKA GDKWKSMS  EKAP+ AKA KRK E
Sbjct  61   RKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKRKAE  106


>gi|22135473|gb|AAM93217.1|AF527616_1  nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
 gi|2196672|emb|CAA70045.1|  HMGd1 [Zea mays]
Length=126

 Score =  130 bits (326),  Expect = 5e-30
 Identities = 64/113 (56%), Positives = 80/113 (70%), Gaps = 10/113 (8%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            +++S    ++LSV K           KA KDPNKPKRP SAFFVFMEEFR+ YK+ HP  
Sbjct  4    RARSTAGDSRLSVRKT----------KAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNV  53

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGPQA  429
            K V+ +GKAGGDKWKS+S+AEKAP+V+KAEK K EY K + AYN +Q+  P A
Sbjct  54   KQVSVIGKAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQSGDPTA  106


>gi|17017392|gb|AAL33650.1|AF440221_1  HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length=126

 Score =  129 bits (325),  Expect = 7e-30
 Identities = 64/113 (56%), Positives = 80/113 (70%), Gaps = 10/113 (8%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            +++S    ++LSV K           KA KDPNKPKRP SAFFVFMEEFR+ YK+ HP  
Sbjct  4    RARSTAGDSRLSVRKT----------KAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNV  53

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEGPQA  429
            K V+ +GKAGGDKWKS+S+AEKAP+V+KAEK K EY K + AYN +Q+  P A
Sbjct  54   KQVSLIGKAGGDKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQSGDPTA  106


>gi|21592453|gb|AAM64404.1|  putative HMG protein [Arabidopsis thaliana]
Length=138

 Score =  126 bits (316),  Expect = 8e-29
 Identities = 60/114 (52%), Positives = 83/114 (72%), Gaps = 4/114 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGNKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +P NKSVA VGKA G +WKSM++ +KAP+VAKAE RK EY KN++ YN + A G
Sbjct  57   NPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG  110


>gi|2832355|emb|CAA74403.1|  HMG protein [Arabidopsis thaliana]
Length=138

 Score =  124 bits (311),  Expect = 3e-28
 Identities = 60/114 (52%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGG+SK+   S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAGATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +P NKSVA VGKA G +WKSM++ +KAP+VAKAE RK EY KN++ YN + A G
Sbjct  57   NPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG  110


>gi|79322411|ref|NP_001031364.1|  HMGB4 (HIGH MOBILITY GROUP B 4) [Arabidopsis thaliana]
Length=134

 Score =  124 bits (311),  Expect = 3e-28
 Identities = 59/114 (51%), Positives = 83/114 (72%), Gaps = 4/114 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +P NKSVA VGKA G +WK+M++ +KAP+VAKAE RK EY KN++ YN + A G
Sbjct  57   NPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG  110


>gi|15227862|ref|NP_179347.1|  HMGB4 (HIGH MOBILITY GROUP B 4); transcription factor [Arabidopsis 
thaliana]
 gi|25385737|pir||F84553  probable HMG protein [imported] - Arabidopsis thaliana
 gi|13926177|gb|AAK49570.1|AF370562_1  putative HMG protein [Arabidopsis thaliana]
 gi|4914377|gb|AAD32913.1|  putative HMG protein [Arabidopsis thaliana]
 gi|23297615|gb|AAN12992.1|  putative HMG protein [Arabidopsis thaliana]
Length=138

 Score =  124 bits (311),  Expect = 3e-28
 Identities = 59/114 (51%), Positives = 83/114 (72%), Gaps = 4/114 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +P NKSVA VGKA G +WK+M++ +KAP+VAKAE RK EY KN++ YN + A G
Sbjct  57   NPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG  110


>gi|13877775|gb|AAK43965.1|AF370150_1  putative HMG protein [Arabidopsis thaliana]
Length=138

 Score =  121 bits (303),  Expect = 2e-27
 Identities = 58/114 (50%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKGG+SK++  S     +++  T+G +   K  KDPN+PKRP SAFFVF+E+FR+++   
Sbjct  1    MKGGESKAEATST----DQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLA  56

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +P NKSVA VGKA G +WK+M++ +KAP+VAKAE  K EY KN++ YN + A G
Sbjct  57   NPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESIKTEYIKNVQQYNLKLASG  110


>gi|4468042|emb|CAB37859.1|  unnamed protein product [Vicia faba var. minor]
Length=74

 Score =  118 bits (296),  Expect = 2e-26
 Identities = 55/74 (74%), Positives = 64/74 (86%), Gaps = 0/74 (0%)
 Frame = +1

Query  178  KDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKA  357
            KDPNKPKRP SAFFVFM +FREQYKKDHP NKSVAAVGKA G++WKS+SE EKAP+V +A
Sbjct  1    KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA  60

Query  358  EKRKVEYEKNMKAY  399
             K+K EYE  ++AY
Sbjct  61   LKKKEEYEITLQAY  74


>gi|15237040|ref|NP_195282.1|  HMGB5 (HIGH MOBILITY GROUP B 5); transcription factor [Arabidopsis 
thaliana]
 gi|2832363|emb|CAA74404.1|  HMG protein [Arabidopsis thaliana]
 gi|3367575|emb|CAA20027.1|  HMG delta protein [Arabidopsis thaliana]
 gi|7270508|emb|CAB80273.1|  HMG delta protein [Arabidopsis thaliana]
 gi|21553743|gb|AAM62836.1|  HMG delta protein [Arabidopsis thaliana]
 gi|98961063|gb|ABF59015.1|  At4g35570 [Arabidopsis thaliana]
Length=125

 Score =  107 bits (267),  Expect = 4e-23
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 0/89 (0%)
 Frame = +1

Query  154  GRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSEAE  333
            G K GK  KDPN+PK+P S FFVF+++FR+++   +P NKSV  VG+A G KWK+M+E E
Sbjct  21   GNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEE  80

Query  334  KAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +APFVAK++ +K EY   M+ YN   A G
Sbjct  81   RAPFVAKSQSKKTEYAVTMQQYNMELANG  109


>gi|115447831|ref|NP_001047695.1|  Os02g0670400 [Oryza sativa (japonica cultivar-group)]
 gi|50251344|dbj|BAD28320.1|  putative high mobility group protein [Oryza sativa (japonica 
cultivar-group)]
 gi|50252158|dbj|BAD28154.1|  putative high mobility group protein [Oryza sativa (japonica 
cultivar-group)]
 gi|113537226|dbj|BAF09609.1|  Os02g0670400 [Oryza sativa (japonica cultivar-group)]
Length=145

 Score =  104 bits (260),  Expect = 2e-22
 Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+D  ++K    +  A  G  K  KA     KPKRP SAFFVFM EFR++Y+  HP N
Sbjct  2    KGKAD--ASKKGEGRLKAAGGAGKRKKAAAS-GKPKRPPSAFFVFMSEFRQEYQAAHPDN  58

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            KSVAAV KA G+KW++MSE EKAP+V KA ++K +YEK    ++K+++
Sbjct  59   KSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKES  106


>gi|18700443|dbj|BAB85204.1|  high mobility group box protein 2 [Oryza sativa (japonica cultivar-group)]
Length=145

 Score =  104 bits (259),  Expect = 3e-22
 Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+D  ++K    +  A  G  K  KA     KPKRP SAFFVFM EFR++Y+  HP N
Sbjct  2    KGKAD--ASKKGEGRLKAAGGAGKRKKAAAS-GKPKRPPSAFFVFMSEFRQEYQAAHPGN  58

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            KSVAAV KA G+KW++MSE EKAP+V KA ++K +YEK    ++K+++
Sbjct  59   KSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKES  106


>gi|1845197|emb|CAA69606.1|  HMGc2 [Zea mays]
Length=138

 Score =  100 bits (249),  Expect = 4e-21
 Identities = 53/102 (51%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            MKG  + S    A+L      A  GG    K      KPKRP SAFFVFM EFR++Y+  
Sbjct  1    MKGKANASKKDEARLR-----AGGGGAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAQ  55

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEK  384
            HP NKSVAAV KA G+KW+SMSE EK P+V +A ++K +YEK
Sbjct  56   HPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKKQDYEK  97


>gi|1845195|emb|CAA69605.1|  HMGc1 [Zea mays]
 gi|5441504|emb|CAB46753.1|  HMGc1 protein [Zea mays]
Length=139

 Score = 97.8 bits (242),  Expect = 3e-20
 Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+DT        +     G RK   A     KPKRP SAFFVFM EFR++Y+  HP N
Sbjct  2    KGKADTSKKDEGRLRAGGAAGKRKKAAA---SGKPKRPPSAFFVFMSEFRQEYQALHPGN  58

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            KSVA V KA G+KW++MS+ EK P+V +A ++K +YEK    ++K+++
Sbjct  59   KSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDKKES  106


>gi|17017394|gb|AAL33651.1|AF440222_1  HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length=139

 Score = 96.3 bits (238),  Expect = 8e-20
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+DT        +     G RK   A     KPKRP SAFF FM EFR++Y+  HP N
Sbjct  2    KGKADTSKKDEGRLRAGGAAGKRKKAAA---SGKPKRPPSAFFAFMSEFRQEYQALHPGN  58

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
            KSVA V KA G+KW++MS+ EK P+V +A ++K +YEK    ++K+++
Sbjct  59   KSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDKKES  106


>gi|115474323|ref|NP_001060758.1|  Os08g0101100 [Oryza sativa (japonica cultivar-group)]
 gi|38637289|dbj|BAD03552.1|  putative HMG type nucleosome/chromatin assembly factor D [Oryza 
sativa (japonica cultivar-group)]
 gi|113622727|dbj|BAF22672.1|  Os08g0101100 [Oryza sativa (japonica cultivar-group)]
Length=203

 Score = 92.0 bits (227),  Expect = 2e-18
 Identities = 41/96 (42%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
 Frame = +1

Query  109  KSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAV  288
            ++ +++ +KK + K    +G+  K   K KRP +AFF+FM +FR++YK +HP NKSV+AV
Sbjct  67   QAVEVAASKKKSGKNNNNNGEGAK---KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAV  123

Query  289  GKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKA  396
             K GG++WKSMS+ +K P++ KA + K EY    ++
Sbjct  124  AKEGGERWKSMSDEDKKPYLDKAAELKAEYHNGERS  159


>gi|115445389|ref|NP_001046474.1|  Os02g0258200 [Oryza sativa (japonica cultivar-group)]
 gi|113536005|dbj|BAF08388.1|  Os02g0258200 [Oryza sativa (japonica cultivar-group)]
Length=269

 Score = 85.5 bits (210),  Expect = 1e-16
 Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
 Frame = +1

Query  130  NKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDK  309
            NKK + KG +K  K  KDP+KPK+P SA+FV+ ++ R     +    K+V  +G+  G++
Sbjct  31   NKKASKKGKKK--KKEKDPSKPKQPMSAYFVYTQQRRAALVAE---KKNVPEIGRITGEE  85

Query  310  WKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            WK+MSEAEKAPF A A K++ EY+  M AY +R+ E
Sbjct  86   WKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQE  121


 Score = 63.9 bits (154),  Expect = 5e-10
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+D    K    ++    GG     A  DPN+PK+PAS+F +F +E R Q  ++ P  
Sbjct  148  KEKTDNIIKKTKEEQRKKKVGG---AAAAADPNRPKKPASSFLLFSKEARRQLAEERPGV  204

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
             S + +      KWK + EAEK  +  KA +    Y+++M+ Y K  A G
Sbjct  205  AS-STLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEYTKAAASG  253


>gi|47497872|dbj|BAD20056.1|  putative embryogenic callus protein 98b [Oryza sativa (japonica 
cultivar-group)]
 gi|50252043|dbj|BAD27975.1|  putative embryogenic callus protein 98b [Oryza sativa (japonica 
cultivar-group)]
Length=504

 Score = 85.5 bits (210),  Expect = 1e-16
 Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
 Frame = +1

Query  130  NKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDK  309
            NKK + KG +K  K  KDP+KPK+P SA+FV+ ++ R     +    K+V  +G+  G++
Sbjct  266  NKKASKKGKKK--KKEKDPSKPKQPMSAYFVYTQQRRAALVAE---KKNVPEIGRITGEE  320

Query  310  WKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            WK+MSEAEKAPF A A K++ EY+  M AY +R+ E
Sbjct  321  WKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQE  356


 Score = 63.9 bits (154),  Expect = 5e-10
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
 Frame = +1

Query  91   KSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKN  270
            K K+D    K    ++    GG     A  DPN+PK+PAS+F +F +E R Q  ++ P  
Sbjct  383  KEKTDNIIKKTKEEQRKKKVGG---AAAAADPNRPKKPASSFLLFSKEARRQLAEERPGV  439

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
             S + +      KWK + EAEK  +  KA +    Y+++M+ Y K  A G
Sbjct  440  AS-STLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEYTKAAASG  488


>gi|115439039|ref|NP_001043799.1|  Os01g0666200 [Oryza sativa (japonica cultivar-group)]
 gi|113533330|dbj|BAF05713.1|  Os01g0666200 [Oryza sativa (japonica cultivar-group)]
Length=149

 Score = 84.3 bits (207),  Expect = 3e-16
 Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 0/95 (0%)
 Frame = +1

Query  136  KPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWK  315
            +P     RK G+ + D  +PK+P +AFF FME+FR+ YK+++P  KS+  VGKA G+KW 
Sbjct  46   QPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWN  105

Query  316  SMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +M+  E+  +   A +++ EYEK +  ++K++  G
Sbjct  106  TMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESG  140


>gi|56202161|dbj|BAD73639.1|  HMG protein-like [Oryza sativa (japonica cultivar-group)]
Length=133

 Score = 84.3 bits (207),  Expect = 3e-16
 Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 0/95 (0%)
 Frame = +1

Query  136  KPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWK  315
            +P     RK G+ + D  +PK+P +AFF FME+FR+ YK+++P  KS+  VGKA G+KW 
Sbjct  30   QPQPPPSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWN  89

Query  316  SMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +M+  E+  +   A +++ EYEK +  ++K++  G
Sbjct  90   TMTFEERVKYYDIATEKRAEYEKAVAEFDKKKESG  124


>gi|17017396|gb|AAL33652.1|AF440223_1  HMG type nucleosome/chromatin assembly factor D [Zea mays]
 gi|22135475|gb|AAM93218.1|AF527617_1  nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length=154

 Score = 81.6 bits (200),  Expect = 2e-15
 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
 Frame = +1

Query  133  KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKW  312
            KK + KGG       KD  K KR  +AFF+FM++FR+++K  HP NKSVA V K GG++W
Sbjct  20   KKSSAKGGGN-----KDA-KRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERW  73

Query  313  KSMSEAEKAPFVAKAEKRKVEYE  381
            KSM++ EK P++ KA + K E E
Sbjct  74   KSMTDEEKKPYIEKAAELKAEAE  96


>gi|18403553|ref|NP_565788.1|  transcription factor [Arabidopsis thaliana]
 gi|20197083|gb|AAC26692.2|  putative HMG protein [Arabidopsis thaliana]
 gi|20197160|gb|AAM14948.1|  putative HMG protein [Arabidopsis thaliana]
 gi|21536857|gb|AAM61189.1|  putative HMG protein [Arabidopsis thaliana]
 gi|26452914|dbj|BAC43535.1|  putative HMG protein [Arabidopsis thaliana]
 gi|28973511|gb|AAO64080.1|  putative HMG protein [Arabidopsis thaliana]
Length=151

 Score = 77.8 bits (190),  Expect = 3e-14
 Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +1

Query  79   MKGGKSKSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKD  258
            +K  +    +   +L   +KP T   +K  K       PK+PA+AFF F+++FR+QY+++
Sbjct  27   VKSSEGARRSTRLRLQPLRKPKTSPKKKPVKL--QTKMPKKPATAFFFFLDDFRKQYQEE  84

Query  259  HPKNKSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAEG  420
            +P  KS+  +GK  G+KWK+M+  EK  +   A +++ E+ + M  Y KR   G
Sbjct  85   NPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRMESG  138


>gi|3551257|dbj|BAA32827.1|  98b [Daucus carota]
Length=502

 Score = 77.0 bits (188),  Expect = 5e-14
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = +1

Query  133  KKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKW  312
            K+      +K  K  KDP KPK P SAFF+FM E R     +    K+V  VGK  G++W
Sbjct  270  KEETENDKKKKTKKEKDPLKPKHPVSAFFLFMNERRADLVAE---KKNVLEVGKITGEEW  326

Query  313  KSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            K+M+E EKAP+   A+K K +Y + M+ Y K++ E
Sbjct  327  KNMTEKEKAPYEEMAKKNKNQYLQQMEVYKKKKDE  361


 Score = 62.0 bits (149),  Expect = 2e-09
 Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
 Frame = +1

Query  97   KSDTKSAKLSVNKKPATKGGRKSGKAVKDPNKPKRPASAFFVFMEEFREQYKKDHP--KN  270
            K   K+  L    K   +  +K  K + DPNKPKRPAS+F +F +E R+   ++ P   N
Sbjct  386  KKKEKTENLIKKTKEERQKKQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERPGINN  445

Query  271  KSVAAVGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQA  414
             ++ A+      KWK +S  EK  +  KA      Y+K M+ YNK  A
Sbjct  446  STLNALISV---KWKEISHEEKQLWNEKAAGAMEAYKKEMEEYNKTTA  490


>gi|18420676|ref|NP_568431.1|  HMGB6; transcription factor [Arabidopsis thaliana]
 gi|21554154|gb|AAM63233.1|  unknown [Arabidopsis thaliana]
 gi|26452394|dbj|BAC43282.1|  unknown protein [Arabidopsis thaliana]
Length=241

 Score = 75.9 bits (185),  Expect = 1e-13
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
 Frame = +1

Query  97   KSDTKSAKLSVNKKPATKGGRK---------SGKAVKDPNKPKRPASAFFVFMEEFREQY  249
            ++  ++ K    KK  T  G K           K+    NKPKRP +AFF+FM +FR+ +
Sbjct  74   ETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTF  133

Query  250  KKDHPKNKSVAA-VGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            K +H  N S+A    K GG+KWKS++E EK  ++ KA + K EY K++++ +  + E
Sbjct  134  KSEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEEE  188


>gi|9759080|dbj|BAB09558.1|  unnamed protein product [Arabidopsis thaliana]
Length=226

 Score = 75.9 bits (185),  Expect = 1e-13
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
 Frame = +1

Query  97   KSDTKSAKLSVNKKPATKGGRK---------SGKAVKDPNKPKRPASAFFVFMEEFREQY  249
            ++  ++ K    KK  T  G K           K+    NKPKRP +AFF+FM +FR+ +
Sbjct  59   ETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTF  118

Query  250  KKDHPKNKSVAA-VGKAGGDKWKSMSEAEKAPFVAKAEKRKVEYEKNMKAYNKRQAE  417
            K +H  N S+A    K GG+KWKS++E EK  ++ KA + K EY K++++ +  + E
Sbjct  119  KSEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEEE  173


>gi|92897442|gb|ABE93670.1|  HMG1/2 (high mobility group) box [Medicago truncatula]
Length=130

 Score = 74.7 bits (182),  Expect = 3e-13
 Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 15/80 (18%)
 Frame = +1

Query  169  KAVKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSEAEKAPFV  348
            KA  DP+KPKRP S FF+FM +FR +++K++P NK V+                +KAP+V
Sbjct  5    KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVS---------------VDKAPYV  49

Query  349  AKAEKRKVEYEKNMKAYNKR  408
            A AEK+K+EY K + AYNK+
Sbjct  50   ADAEKKKMEYVKAIHAYNKK  69
Distribution of 110 Blast Hits on the Query Sequence
