Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940305-13535-210553463808.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig254 Length=567
Score E Sequences producing significant alignments: (Bits) Value gi|92884472|gb|ABE87377.1| hypothetical protein MtrDRAFT_AC15... 130 2e-30 gi|76160935|gb|ABA40431.1| unknown [Solanum tuberosum] 115 1e-25 gi|24461857|gb|AAN62344.1|AF506028_11 CTV.15 [Poncirus trifoliat 106 5e-23 gi|15238753|ref|NP_197910.1| unknown protein [Arabidopsis tha... 105 1e-22 gi|21618161|gb|AAM67211.1| serine-rich protein [Arabidopsis thal 104 2e-22 gi|15238947|ref|NP_196670.1| unknown protein [Arabidopsis tha... 104 2e-22 gi|119720804|gb|ABL97972.1| serine-rich protein [Brassica rapa] 82.8 8e-16 gi|15241329|ref|NP_197537.1| unknown protein [Arabidopsis thalia 52.8 8e-07 gi|115468874|ref|NP_001058036.1| Os06g0608000 [Oryza sativa (... 52.4 1e-06 gi|92884469|gb|ABE87374.1| hypothetical protein MtrDRAFT_AC15... 51.6 2e-06 gi|15220581|ref|NP_176958.1| unknown protein [Arabidopsis tha... 48.1 2e-05 gi|15228935|ref|NP_191209.1| unknown protein [Arabidopsis tha... 47.0 5e-05 gi|53748443|emb|CAH59418.1| hypothetical protein [Plantago major 46.6 6e-05 gi|115449263|ref|NP_001048411.1| Os02g0799700 [Oryza sativa (... 46.6 6e-05 gi|15241100|ref|NP_200409.1| unknown protein [Arabidopsis tha... 46.6 6e-05 gi|115449261|ref|NP_001048410.1| Os02g0799600 [Oryza sativa (... 45.4 1e-04 gi|4105790|gb|AAD02552.1| PGPS/D10 [Petunia x hybrida] 44.7 2e-04 gi|116830225|gb|ABK28070.1| unknown [Arabidopsis thaliana] 44.3 3e-04 gi|92888302|gb|ABE89320.1| PGPS/D10 [Medicago truncatula] 44.3 3e-04 gi|62320057|dbj|BAD94213.1| hypothetical protein [Arabidopsis... 44.3 3e-04 gi|22331053|ref|NP_683560.1| unknown protein [Arabidopsis tha... 44.3 3e-04 gi|49387530|dbj|BAD25063.1| hypothetical protein [Oryza sativa ( 43.9 4e-04 gi|32490262|emb|CAE05551.1| OSJNBb0116K07.4 [Oryza sativa (ja... 43.1 7e-04 gi|115452731|ref|NP_001049966.1| Os03g0322200 [Oryza sativa (... 42.4 0.001 gi|38346149|emb|CAE02024.2| OSJNBb0118P14.9 [Oryza sativa (ja... 41.6 0.002 gi|38569169|emb|CAE05359.3| OJ000315_02.4 [Oryza sativa (japonic 41.6 0.002 gi|53792211|dbj|BAD52844.1| hypothetical protein [Oryza sativa ( 40.4 0.004 gi|115440301|ref|NP_001044430.1| Os01g0778900 [Oryza sativa (... 40.4 0.004 gi|115446429|ref|NP_001046994.1| Os02g0525600 [Oryza sativa (... 38.9 0.013 gi|116830075|gb|ABK27995.1| unknown [Arabidopsis thaliana] 36.6 0.063 gi|98961939|gb|ABF59299.1| unknown protein [Arabidopsis thaliana 36.6 0.063 gi|116055459|emb|CAL58127.1| unnamed protein product [Ostreococc 32.7 0.91 gi|115479039|ref|NP_001063113.1| Os09g0400200 [Oryza sativa (... 30.4 4.5 gi|47497802|dbj|BAD19900.1| hypothetical protein [Oryza sativ... 30.4 4.5 gi|15238822|ref|NP_199595.1| ATP binding / adenylate kinase/ ... 29.6 7.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 402 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 567 Length of database: 101054579 Length adjustment: 107 Effective length of query: 460 Effective length of database: 70736236 Effective search space: 5800371352 Effective search space used: 5800371352 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)