Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940390-19351-197796266593.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig258 Length=573
Score E Sequences producing significant alignments: (Bits) Value gi|92893885|gb|ABE91935.1| Elongation factor 1, gamma chain; ... 194 2e-49 gi|90101285|sp|Q6YW46|EF1G2_ORYSA Elongation factor 1-gamma 2 (E 189 8e-48 gi|29367403|gb|AAO72574.1| elongation factor 1 gamma-like pro... 189 8e-48 gi|115445075|ref|NP_001046317.1| Os02g0220500 [Oryza sativa (... 189 8e-48 gi|115445077|ref|NP_001046318.1| Os02g0220600 [Oryza sativa (... 189 8e-48 gi|13626392|sp|Q9FUM1|EF1G_PRUAV Elongation factor 1-gamma (E... 187 3e-47 gi|29367381|gb|AAO72563.1| elongation factor 1 gamma-like pro... 185 1e-46 gi|115468634|ref|NP_001057916.1| Os06g0571400 [Oryza sativa (... 185 1e-46 gi|62321191|dbj|BAD94347.1| hypothetical protein [Arabidopsis th 184 1e-46 gi|19423960|gb|AAL87298.1| unknown protein [Arabidopsis thaliana 184 1e-46 gi|14334818|gb|AAK59587.1| putative elongation factor 1B gamma [ 184 1e-46 gi|15223649|ref|NP_176084.1| translation elongation factor [A... 184 1e-46 gi|18391048|ref|NP_563848.1| translation elongation factor [A... 184 1e-46 gi|62318991|dbj|BAD94101.1| hypothetical protein [Arabidopsis th 183 4e-46 gi|82623387|gb|ABB87108.1| putative elongation factor 1-gamma-li 183 4e-46 gi|77416961|gb|ABA81876.1| unknown [Solanum tuberosum] 183 4e-46 gi|18958499|gb|AAL82617.1|AF475939_1 elongation factor 1-gamma [ 177 3e-44 gi|5853094|gb|AAD54312.1| elongation factor eEF1 gamma chain ... 111 2e-24 gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa (... 30.4 4.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 348 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 573 Length of database: 101054579 Length adjustment: 107 Effective length of query: 466 Effective length of database: 70736236 Effective search space: 5941843824 Effective search space used: 5941843824 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)