Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940969-29865-87936285387.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig276 Length=258
Score E Sequences producing significant alignments: (Bits) Value gi|82400128|gb|ABB72803.1| alpha-tubulin-like protein [Solanum t 100 9e-26 gi|1174592|sp|P46259|TBA1_PEA Tubulin alpha-1 chain >gi|525332|g 100 9e-26 gi|110742192|dbj|BAE99023.1| tubulin alpha-2/alpha-4 chain [Arab 100 9e-26 gi|99082883|gb|ABC59068.2| alpha tubulin 1 [Camellia sinensis] 100 9e-26 gi|92896308|gb|ABE93145.1| Cell division protein FtsZ [Medicago 100 9e-26 gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menzi... 100 9e-26 gi|17402471|emb|CAD13178.1| alpha-tubulin [Nicotiana tabacum] 100 9e-26 gi|17402469|emb|CAD13177.1| alpha-tubulin [Nicotiana tabacum] 100 9e-26 gi|15029368|gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa 100 9e-26 gi|17402467|emb|CAD13176.1| alpha-tubulin [Nicotiana tabacum] 100 9e-26 gi|16226462|gb|AAL16174.1|AF428406_1 AT4g14960/dl3520c [Arabidop 100 9e-26 gi|27819095|gb|AAO23139.1| alpha tubulin [Populus tremuloides] 100 9e-26 gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus tremuloides] 100 9e-26 gi|77745465|gb|ABB02631.1| unknown [Solanum tuberosum] 100 9e-26 gi|54036494|sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain (Alpha... 100 9e-26 gi|15233627|ref|NP_193232.1| TUA6 [Arabidopsis thaliana] >gi|... 100 9e-26 gi|464840|sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain >gi|2964... 100 9e-26 gi|15220329|ref|NP_171974.1| TUA4 [Arabidopsis thaliana] >gi|... 100 9e-26 gi|464849|sp|P33629|TBA_PRUDU Tubulin alpha chain >gi|20413|e... 100 9e-26 gi|4206112|gb|AAD11425.1| alpha tubulin [Mesembryanthemum crysta 100 9e-26 gi|106879605|emb|CAJ38386.1| alpha tubulin [Plantago major] 100 9e-26 gi|110740101|dbj|BAF01952.1| putative tubulin alpha-2/alpha-4 ch 100 9e-26 gi|16973312|emb|CAC84108.1| alpha-tubulin [Gossypium hirsutum] 100 9e-26 gi|5757890|gb|AAD50627.1|AF106569_1 alpha-tubulin [Gossypium hir 100 9e-26 gi|5757886|gb|AAD50625.1|AF106567_1 alpha-tubulin [Gossypium hir 100 9e-26 gi|5757892|gb|AAD50628.1|AF106570_1 alpha-tubulin [Gossypium hir 100 9e-26 gi|52001189|gb|AAU21475.1| alpha-tubulin [Camellia sinensis] 100 9e-26 gi|30841461|gb|AAP34367.1| alpha-tubulin [Gossypium barbadense] 100 9e-26 gi|54036493|sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain (Alpha... 100 1e-25 gi|5757888|gb|AAD50626.1|AF106568_1 alpha-tubulin [Gossypium hir 100 1e-25 gi|83308255|emb|CAJ44429.1| alpha tubulin [Cocos nucifera] 100 1e-25 gi|57867853|gb|AAW57306.1| alpha-tubulin [Ceratopteris richar... 99.4 2e-25 gi|116059394|emb|CAL55101.1| Beta tubulin (ISS) [Ostreococcus ta 98.2 2e-25 gi|51988174|emb|CAE52515.1| alpha tubulin [Setaria viridis] 99.0 2e-25 gi|1556446|gb|AAB08791.1| alpha tubulin [Hordeum vulgare] 99.0 2e-25 gi|54036492|sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain (Alpha... 99.0 2e-25 gi|8928408|sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain >gi|409827... 99.0 2e-25 gi|135411|sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain (Alpha-2... 99.0 2e-25 gi|8928422|sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain >gi|161... 99.0 2e-25 gi|3163946|emb|CAA06619.1| alpha-tubulin 1 [Eleusine indica] 99.0 2e-25 gi|6094429|sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain (Alpha-... 99.0 2e-25 gi|135398|sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain (Alpha-1... 99.0 2e-25 gi|8928432|sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain >gi|416... 99.0 2e-25 gi|8928409|sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain >gi|416222... 98.2 2e-25 gi|7209196|emb|CAB76917.1| alpha-tubulin 4 [Hordeum vulgare subs 99.0 2e-25 gi|9188543|dbj|BAA99561.1| alpha-tubulin [Chlorella vulgaris] 98.2 2e-25 gi|23452333|gb|AAN32997.1| alpha-tubulin 1 [Gossypium hirsutum] 100 2e-25 gi|77999295|gb|ABB16994.1| unknown [Solanum tuberosum] 99.4 3e-25 gi|37936226|emb|CAD26890.1| alpha-tubulin [Miscanthus sinensis v 99.4 3e-25 gi|37936222|emb|CAD26888.1| alpha-tubulin [Miscanthus transmorri 99.4 3e-25 gi|37936220|emb|CAD26887.1| alpha-tubulin [Miscanthus sinensis] 99.4 3e-25 gi|62546341|gb|AAX86047.1| tubulin A [Glycine max] 99.4 3e-25 gi|37936210|emb|CAD24765.1| alpha-tubulin [Miscanthus sinensis] 99.4 3e-25 gi|37936214|emb|CAD24767.1| alpha-tubulin [Miscanthus floridulus 99.4 3e-25 gi|37936218|emb|CAD26886.1| alpha-tubulin [Miscanthus sinensis] 99.4 3e-25 gi|37936230|emb|CAD26892.1| alpha-tubulin [Miscanthus floridulus 99.4 3e-25 gi|37936228|emb|CAD26891.1| alpha-tubulin [Miscanthus floridulus 99.4 3e-25 gi|37936216|emb|CAD24768.1| alpha-tubulin [Miscanthus floridulus 99.4 3e-25 gi|37936212|emb|CAD24766.1| alpha-tubulin [Miscanthus sinensis] 99.4 3e-25 gi|6094431|sp|O22349|TBA3_ELEIN Tubulin alpha-3 chain (Alpha-... 99.4 3e-25 gi|25396545|dbj|BAC24799.1| alpha tubulin [Physcomitrella patens 99.4 3e-25 gi|401161|sp|Q02245|TBA5_MAIZE Tubulin alpha-5 chain (Alpha-5... 99.4 3e-25 gi|8928419|sp|Q43473|TBA1_HORVU Tubulin alpha-1 chain >gi|147... 99.4 3e-25 gi|464846|sp|P33627|TBA6_MAIZE Tubulin alpha-6 chain (Alpha-6... 99.4 3e-25 gi|115472953|ref|NP_001060075.1| Os07g0574800 [Oryza sativa (... 99.4 3e-25 gi|15241168|ref|NP_197478.1| TUA3 [Arabidopsis thaliana] >gi|... 99.4 3e-25 gi|34733239|gb|AAQ81585.1| putative tubulin alpha-2/alpha-4 chai 98.6 3e-25 gi|37936224|emb|CAD26889.1| alpha-tubulin [Miscanthus transmorri 99.4 3e-25 gi|18157218|emb|CAD20821.1| alpha tubulin [Zea mays] 99.4 3e-25 gi|112292929|emb|CAL35827.1| alpha-2 tubulin [Plantago major] 99.4 3e-25 gi|18157216|emb|CAD20820.1| alpha tubulin [Zea mays] 99.4 3e-25 gi|62321469|dbj|BAD94893.1| tubulin alpha-5 chain-like protein [ 99.4 3e-25 gi|11967906|dbj|BAB19779.1| alpha tubulin [Nicotiana tabacum] 98.2 4e-25 gi|1101025|gb|AAB36609.1| alpha-tubulin [Eucalyptus globulus sub 97.8 4e-25 gi|57867861|gb|AAW57310.1| alpha-tubulin [Ceratopteris richar... 98.2 4e-25 gi|57867859|gb|AAW57309.1| alpha-tubulin [Ceratopteris richardii 98.2 4e-25 gi|6723478|emb|CAB66336.1| alpha-tubulin [Betula pendula] 97.8 5e-25 gi|1136120|emb|CAA62916.1| alpha-tubulin [Oryza sativa (japonica 97.8 5e-25 gi|115455063|ref|NP_001051132.1| Os03g0726100 [Oryza sativa (... 97.8 5e-25 gi|25396550|dbj|BAC24800.1| alpha tubulin [Physcomitrella patens 97.8 5e-25 gi|108710846|gb|ABF98641.1| Tubulin alpha-1 chain, putative, ... 97.8 5e-25 gi|116060752|emb|CAL57230.1| Beta tubulin (ISS) [Ostreococcus ta 96.7 7e-25 gi|15217737|ref|NP_176654.1| TUA1 (ALPHA-1 TUBULIN) [Arabidop... 98.2 7e-25 gi|226261|prf||1503274A alpha1 tubulin 98.2 7e-25 gi|51988172|emb|CAE52514.1| alpha tubulin [Setaria viridis] 97.4 7e-25 gi|63126536|gb|AAX63396.1| alpha-tubulin [Haematococcus pluviali 96.7 7e-25 gi|37910128|gb|AAO63773.1| alpha-tubulin 2 [Populus tremuloides] 98.2 7e-25 gi|83283967|gb|ABC01891.1| tubulin alpha-5 chain-like protein [S 99.4 9e-25 gi|2625156|gb|AAB86649.1| alpha-tubulin [Chloromonas sp. ANT1] 96.3 9e-25 gi|2625154|gb|AAB86648.1| alpha-tubulin [Chloromonas sp. ANT3] 96.3 9e-25 gi|135394|sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain >gi|1674... 96.3 9e-25 gi|135404|sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain ... 96.3 9e-25 gi|393401|emb|CAA52158.1| alpha tubulin [Zea mays] 97.1 9e-25 gi|18157214|emb|CAD20819.1| alpha tubulin [Zea mays] 97.1 9e-25 gi|8928404|sp|Q38771|TBA_AVESA Tubulin alpha chain >gi|127920... 97.4 1e-24 gi|5757894|gb|AAD50629.1|AF106571_1 alpha-tubulin [Gossypium hir 97.1 2e-24 gi|37936232|emb|CAD26893.1| alpha-tubulin [Miscanthus floridulus 96.7 2e-24 gi|464841|sp|P33624|TBA2_ANEPH Tubulin alpha-2 chain >gi|2964... 96.7 2e-24 gi|49036476|sp|Q9FT36|TBA_DAUCA Tubulin alpha chain >gi|99659... 95.5 3e-24 gi|6094430|sp|O22348|TBA2_ELEIN Tubulin alpha-2 chain (Alpha-... 96.3 3e-24
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 167 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 258 Length of database: 101054579 Length adjustment: 56 Effective length of query: 202 Effective length of database: 85187035 Effective search space: 2555611050 Effective search space used: 2555611050 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)