Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928085-1721-81037703508.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig65 Length=483
Score E Sequences producing significant alignments: (Bits) Value gi|29824365|gb|AAP04143.1| unknown protein [Arabidopsis thali... 219 5e-57 gi|15221382|ref|NP_177616.1| unknown protein [Arabidopsis tha... 219 5e-57 gi|15221898|ref|NP_173328.1| unknown protein [Arabidopsis tha... 216 4e-56 gi|110736938|dbj|BAF00426.1| nodulin-like protein [Arabidopsis t 208 6e-54 gi|3337366|gb|AAC27411.1| nodulin-like protein [Arabidopsis thal 208 6e-54 gi|42570361|ref|NP_850229.2| unknown protein [Arabidopsis tha... 208 6e-54 gi|30686019|ref|NP_850228.1| unknown protein [Arabidopsis tha... 205 7e-53 gi|61656791|emb|CAH10054.1| Unknown similar to A.thaliana Hyp... 193 3e-49 gi|61656786|emb|CAH10046.1| Unknown similar to A.thaliana Hyp... 193 3e-49 gi|61656801|emb|CAH10068.1| Unknown similar to A.thaliana Hyp... 193 3e-49 gi|61656811|emb|CAH10204.1| Unknown similar to A.thaliana Hyp... 192 4e-49 gi|55276712|gb|AAV49984.1| hypothetical protein [Hordeum vulgare 192 4e-49 gi|115489798|ref|NP_001067386.1| Os12g0639100 [Oryza sativa (... 192 5e-49 gi|15225053|ref|NP_181454.1| unknown protein [Arabidopsis tha... 132 5e-31 gi|34394606|dbj|BAC83908.1| putative nodule-specific protein ... 127 2e-29 gi|115488580|ref|NP_001066777.1| Os12g0484600 [Oryza sativa (... 126 4e-29 gi|77555720|gb|ABA98516.1| nodulin family protein, putative, ... 126 4e-29 gi|115455961|ref|NP_001051581.1| Os03g0800000 [Oryza sativa (... 125 6e-29 gi|28209525|gb|AAO37543.1| putative nodule-specific protein [... 125 6e-29 gi|15236224|ref|NP_195221.1| unknown protein [Arabidopsis tha... 125 7e-29 gi|15241312|ref|NP_196916.1| unknown protein [Arabidopsis tha... 125 9e-29 gi|115489772|ref|NP_001067373.1| Os12g0637700 [Oryza sativa (... 124 2e-28 gi|57545995|gb|AAW51884.1| nitrate and chloride transporter [Gly 124 2e-28 gi|15226338|ref|NP_180379.1| unknown protein [Arabidopsis tha... 123 3e-28 gi|108710429|gb|ABF98224.1| nodulin family protein, putative ... 122 6e-28 gi|31712079|gb|AAP68384.1| hypothetical protein [Oryza sativa (j 122 6e-28 gi|15227274|ref|NP_179257.1| unknown protein [Arabidopsis tha... 122 8e-28 gi|18395988|ref|NP_566157.1| unknown protein [Arabidopsis tha... 120 2e-27 gi|30678455|ref|NP_850497.1| unknown protein [Arabidopsis thalia 120 2e-27 gi|3329368|gb|AAC39501.1| nodulin-like protein [Arabidopsis thal 120 3e-27 gi|115489774|ref|NP_001067374.1| Os12g0637800 [Oryza sativa (... 119 5e-27 gi|77557188|gb|ABA99984.1| nodulin family protein, putative, ... 119 5e-27 gi|115477487|ref|NP_001062339.1| Os08g0532400 [Oryza sativa (... 119 7e-27 gi|3329366|gb|AAC39500.1| nodule-specific protein Nlj70 [Lotus j 117 3e-26 gi|115480387|ref|NP_001063787.1| Os09g0536700 [Oryza sativa (... 115 7e-26 gi|92867784|gb|ABE77921.1| Nodulin-like; Major facilitator su... 114 1e-25 gi|115458064|ref|NP_001052632.1| Os04g0388700 [Oryza sativa (... 114 2e-25 gi|19881621|gb|AAM01022.1|AC090488_22 Hypothetical protein [O... 108 9e-24 gi|62320638|dbj|BAD95303.1| nodulin-like protein [Arabidopsis th 107 3e-23 gi|18423161|ref|NP_568730.1| unknown protein [Arabidopsis tha... 107 3e-23 gi|92896651|gb|ABE93291.1| Nodulin-like [Medicago truncatula] 95.9 6e-20 gi|116310794|emb|CAH67585.1| OSIGBa0112M24.2 [Oryza sativa (indi 95.5 8e-20 gi|115459272|ref|NP_001053236.1| Os04g0502800 [Oryza sativa (... 95.5 8e-20 gi|70663917|emb|CAE02931.3| OSJNBa0014K14.3 [Oryza sativa (japon 95.5 8e-20 gi|37572921|dbj|BAC98515.1| nodulin-like protein [Oryza sativ... 94.7 1e-19 gi|115466738|ref|NP_001056968.1| Os06g0179200 [Oryza sativa (... 94.0 2e-19 gi|24461856|gb|AAN62343.1|AF506028_10 nodulin-like protein [Ponc 93.6 3e-19 gi|15220164|ref|NP_178168.1| unknown protein [Arabidopsis tha... 87.0 3e-17 gi|46931328|gb|AAT06468.1| At4g34950 [Arabidopsis thaliana] 77.8 2e-14 gi|1532169|gb|AAB07879.1| similar to a E. coli hypothetical p... 73.2 4e-13 gi|15227733|ref|NP_180589.1| unknown protein [Arabidopsis tha... 68.6 1e-11 gi|56236086|gb|AAV84499.1| At5g45275 [Arabidopsis thaliana] >... 67.0 3e-11 gi|42573579|ref|NP_974886.1| unknown protein [Arabidopsis thalia 67.0 3e-11 gi|18415316|ref|NP_567588.1| unknown protein [Arabidopsis tha... 64.3 2e-10 gi|3080375|emb|CAA18632.1| putative protein [Arabidopsis thal... 64.3 2e-10 gi|21536488|gb|AAM60820.1| unknown [Arabidopsis thaliana] 63.5 3e-10 gi|6016721|gb|AAF01547.1|AC009325_17 hypothetical protein [Arabi 60.8 2e-09 gi|28393720|gb|AAO42271.1| unknown protein [Arabidopsis thaliana 60.8 2e-09 gi|79386572|ref|NP_186812.2| unknown protein [Arabidopsis thalia 60.8 2e-09 gi|15222361|ref|NP_174432.1| unknown protein [Arabidopsis tha... 60.1 4e-09 gi|115440781|ref|NP_001044670.1| Os01g0825500 [Oryza sativa (... 59.7 5e-09 gi|115464465|ref|NP_001055832.1| Os05g0475700 [Oryza sativa (... 58.9 8e-09 gi|115486906|ref|NP_001065940.1| Os12g0106500 [Oryza sativa (... 54.3 2e-07 gi|115483765|ref|NP_001065544.1| Os11g0107400 [Oryza sativa (... 53.1 5e-07 gi|56201558|dbj|BAD73446.1| nodulin-like protein [Oryza sativ... 42.7 6e-04 gi|115480878|ref|NP_001064032.1| Os10g0109900 [Oryza sativa (... 32.0 1.1 gi|19920090|gb|AAM08522.1|AC068654_24 Putative peptide transp... 32.0 1.1 gi|62319086|dbj|BAD94232.1| nodulin-like protein [Arabidopsis th 31.2 1.9 gi|92869452|gb|ABE79166.1| Zinc finger, CCHC-type [Medicago trun 30.8 2.4 gi|38638311|ref|NP_943704.1| putative intron maturase [Chara ... 30.8 2.4 gi|115474855|ref|NP_001061024.1| Os08g0156600 [Oryza sativa (... 30.4 3.2 gi|37805851|dbj|BAC99502.1| putative Glycerol-3-phosphate tra... 30.4 3.2 gi|92876816|gb|ABE84116.1| Sugar transporter superfamily; Maj... 30.0 4.1 gi|2342694|gb|AAB70421.1| Similar to Vicia transcription fact... 30.0 4.1 gi|42561833|ref|NP_172366.2| EMB3001; zinc ion binding [Arabidop 30.0 4.1 gi|71979923|dbj|BAD00099.2| nitrate transporter [Physcomitrel... 30.0 4.1 gi|92879472|gb|ABE85560.1| Cation transporting ATPase, C-termina 29.6 5.4 gi|115482410|ref|NP_001064798.1| Os10g0465700 [Oryza sativa (... 29.6 5.4 gi|90265061|emb|CAH67686.1| H0510A06.11 [Oryza sativa (indica... 29.3 7.0 gi|115459028|ref|NP_001053114.1| Os04g0481800 [Oryza sativa (... 29.3 7.0 gi|37963489|gb|AAR05868.1| RNA polymerase II largest subunit [Ny 28.9 9.2 gi|33326215|gb|AAQ08517.1| RNA polymerase II largest subunit [Ny 28.9 9.2
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 289 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 483 Length of database: 101054579 Length adjustment: 104 Effective length of query: 379 Effective length of database: 71586283 Effective search space: 4080418131 Effective search space used: 4080418131 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)