Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926517-2405-84338546460.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig7 Length=483
Score E Sequences producing significant alignments: (Bits) Value gi|17529280|gb|AAL38867.1| putative protein kinase [Arabidopsis 109 4e-24 gi|30685021|ref|NP_196976.2| ATP binding / kinase/ protein ki... 109 4e-24 gi|115468132|ref|NP_001057665.1| Os06g0486400 [Oryza sativa (... 61.6 1e-09 gi|15223145|ref|NP_177200.1| ATP binding / kinase/ protein ki... 54.3 2e-07 gi|22328895|ref|NP_194141.2| ATP binding / kinase/ protein ki... 41.6 0.001 gi|42566410|ref|NP_192811.3| ATP binding / kinase/ protein ki... 36.2 0.058 gi|42563356|ref|NP_178082.2| ATP binding / kinase/ protein ki... 34.3 0.22 gi|92881598|gb|ABE86316.1| Protein kinase [Medicago truncatula] 32.7 0.64 gi|7267771|emb|CAB81174.1| putative protein kinase [Arabidopsis 32.0 1.1 gi|5668638|emb|CAB51653.1| putative protein [Arabidopsis thal... 30.8 2.4 gi|4056452|gb|AAC98025.1| Similar to gb|U51923 STE20 from Dic... 30.8 2.4 gi|15220847|ref|NP_173782.1| ATP binding / kinase/ protein ki... 30.8 2.4 gi|79327698|ref|NP_001031871.1| unknown protein [Arabidopsis ... 29.3 7.0 gi|14586367|emb|CAC42898.1| putative protein [Arabidopsis thalia 29.3 7.0 gi|79327728|ref|NP_001031872.1| unknown protein [Arabidopsis tha 29.3 7.0 gi|24418670|sp|Q8RVQ5|EXOC5_ARATH Exocyst complex component 5... 29.3 7.0 gi|33439168|gb|AAQ18707.1| cytochrome P450 [Mentha x gracilis] 28.9 9.2
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 296 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 483 Length of database: 101054579 Length adjustment: 104 Effective length of query: 379 Effective length of database: 71586283 Effective search space: 4080418131 Effective search space used: 4080418131 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)