Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928941-2241-189502553181.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig94 Length=354
Score E Sequences producing significant alignments: (Bits) Value gi|18408349|ref|NP_564863.1| unknown protein [Arabidopsis tha... 99.8 3e-21 gi|21592594|gb|AAM64543.1| unknown [Arabidopsis thaliana] 99.4 3e-21 gi|115450227|ref|NP_001048714.1| Os03g0110300 [Oryza sativa (... 68.9 5e-12 gi|24431598|gb|AAN61478.1| Unknown protein [Oryza sativa (japoni 68.9 5e-12 gi|3860308|emb|CAA10123.1| hypothetical protein [Cicer arietinum 61.6 8e-10 gi|115482588|ref|NP_001064887.1| Os10g0483900 [Oryza sativa (... 58.5 7e-09 gi|92876120|gb|ABE83853.1| Concanavalin A-like lectin/glucanase 34.3 0.14 gi|87240890|gb|ABD32748.1| putative lectin-related [Medicago tru 31.2 1.2 gi|82698813|gb|ABB89209.1| peroxidase [Sesamum indicum] 30.8 1.5 gi|28629828|gb|AAO45182.1| peroxidase 1 [Artemisia annua] 30.4 2.0 gi|15238398|ref|NP_200750.1| oxysterol binding [Arabidopsis t... 30.0 2.6 gi|23476263|gb|AAM44084.1| fructokinase [Lycopersicon esculentum 30.0 2.6 gi|87240852|gb|ABD32710.1| Peptidase S8 and S53, subtilisin, ... 30.0 2.6 gi|8885548|dbj|BAA97478.1| oxysterol-binding protein [Arabidopsi 30.0 2.6 gi|77552810|gb|ABA95606.1| retrotransposon protein, putative,... 29.6 3.4 gi|18420830|ref|NP_568451.1| unknown protein [Arabidopsis tha... 29.3 4.4 gi|14485511|emb|CAC42086.1| putative peroxidase [Solanum tuberos 29.3 4.4 gi|19881577|gb|AAM00978.1|AC090482_7 Putative retrovirus-rela... 29.3 4.4 gi|15232633|ref|NP_187541.1| oxysterol binding [Arabidopsis t... 28.9 5.7 gi|110288918|gb|ABG66024.1| retrotransposon protein, putative... 28.5 7.5 gi|15241681|ref|NP_195830.1| oxysterol binding [Arabidopsis t... 28.5 7.5 gi|77554328|gb|ABA97124.1| retrotransposon protein, putative,... 28.5 7.5 gi|115473999|ref|NP_001060598.1| Os07g0671400 [Oryza sativa (... 28.1 9.8 gi|92875379|gb|ABE83372.1| Cyclin-dependent kinase inhibitor [Me 28.1 9.8 gi|47777371|gb|AAT38005.1| putative polyprotein [Oryza sativa... 28.1 9.8 gi|77553430|gb|ABA96226.1| retrotransposon protein, putative,... 28.1 9.8 gi|77551820|gb|ABA94617.1| hypothetical protein LOC_Os11g3909... 28.1 9.8 gi|33146848|dbj|BAC79843.1| copper chaperone (CCH)-related pr... 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 224 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 354 Length of database: 101054579 Length adjustment: 85 Effective length of query: 269 Effective length of database: 76969914 Effective search space: 2540007162 Effective search space used: 2540007162 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)