Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928974-9298-125541112980.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig95 Length=663
Score E Sequences producing significant alignments: (Bits) Value gi|30689623|ref|NP_850411.1| structural constituent of riboso... 216 4e-67 gi|30689617|ref|NP_850410.1| structural constituent of riboso... 216 4e-67 gi|77999275|gb|ABB16984.1| thaliana 60S ribosomal protein L7 ... 215 5e-67 gi|445613|prf||1909359B ribosomal protein L7 215 5e-67 gi|15226212|ref|NP_178234.1| structural constituent of riboso... 215 8e-67 gi|27311547|gb|AAO00739.1| Unknown protein [Arabidopsis thaliana 213 2e-66 gi|87162669|gb|ABD28464.1| Peptidase, cysteine peptidase acti... 216 3e-66 gi|115460394|ref|NP_001053797.1| Os04g0605900 [Oryza sativa (... 211 3e-66 gi|15231288|ref|NP_187967.1| structural constituent of riboso... 212 7e-66 gi|57471716|gb|AAW50989.1| ribosomal protein L7 [Triticum aestiv 209 1e-65 gi|115475427|ref|NP_001061310.1| Os08g0234000 [Oryza sativa (... 207 1e-65 gi|38346542|emb|CAE02124.2| OSJNBa0035M09.3 [Oryza sativa (ja... 206 1e-64 gi|116056518|emb|CAL52807.1| 60S ribosomal protein L7 (ISS) [Ost 174 2e-53 gi|83283989|gb|ABC01902.1| putative 60S ribosomal protein L7-... 153 8e-42 gi|115477589|ref|NP_001062390.1| Os08g0542100 [Oryza sativa (... 145 2e-35 gi|15220825|ref|NP_178190.1| structural constituent of riboso... 117 4e-30 gi|110739878|dbj|BAF01844.1| At2g44120/F6E13.25 [Arabidopsis tha 89.4 1e-17 gi|2494261|sp|Q43467|EFTU1_SOYBN Elongation factor Tu, chloro... 31.2 3.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 436 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 663 Length of database: 101054579 Length adjustment: 109 Effective length of query: 554 Effective length of database: 70169538 Effective search space: 7858988256 Effective search space used: 7858988256 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)