LOCUS CEVH15N14R 2363 bp DNA linear INV 09-AUG-2005 DEFINITION Caenorhabditis elegans Plasmid VH15N14R, complete sequence. ACCESSION AL033124 VERSION AL033124.1 GI:3820638 KEYWORDS HTG. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2363) AUTHORS . CONSRTM C. elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REFERENCE 2 (bases 1 to 2363) AUTHORS McMurray,A.A. TITLE Direct Submission JOURNAL Submitted (17-DEC-1998) Nematode Sequencing Project, Sanger Institute, Hinxton, Cambridge CB10 1SA, England and Department of Genetics, Washington University, St. Louis, MO 63110, USA. E-mail: worm@sanger.ac.uk COMMENT Coding sequences below are predicted from computer analysis, using predictions from Genefinder (P. Green, U. Washington), and other available information. Current sequence finishing criteria for the C. elegans genome sequencing consortium are that all bases are either sequenced unambiguously on both strands, or on a single strand with both a dye primer and dye terminator reaction, from distinct subclones. Exceptions are indicated by an explicit note. IMPORTANT: This sequence is NOT necessarily the entire insert of the specified clone. It may be shorter because we only sequence overlapping sections once, or longer because we arrange for a small overlap between neighbouring submissions. For a graphical representation of this sequence and its analysis see:- http://www.wormbase.org/perl/ace/elegans/seq/sequence? name=VH15N14R;class=Sequence IMPORTANT: This sequence is not the entire insert of clone VH15N14R. It may be shorter because we only sequence overlapping sections once, or longer because we arrange for a small overlap between neighbouring submissions. The true left end of clone D2005 is at 2260 in this sequence. The true right end of clone H15N14 is at 104 in this sequence. The start of this sequence (1..104) overlaps with the end of sequence Z96100. The end of this sequence (2260..2363) overlaps with the start of sequence Z79752. FEATURES Location/Qualifiers source 1..2363 /organism="Caenorhabditis elegans" /mol_type="genomic DNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="I" /clone="VH15N14R" gene join(complement(1252..1286),complement(1081..1208), complement(603..707),complement(105..393), complement(Z96100.1:11049..11160)) /locus_tag="VH15N14R.1" CDS join(complement(1252..1286),complement(1081..1208), complement(603..707),complement(105..393), complement(Z96100.1:11049..11160)) /locus_tag="VH15N14R.1" /standard_name="VH15N14R.1" /note="contains similarity to Aspergillus niger Protein kinase C-like (EC 2.7.1.-).; SW:KPC1_ASPNG" /codon_start=1 /product="Hypothetical protein VH15N14R.1" /protein_id="CAB76736.1" /db_xref="GI:7160679" /db_xref="UniProtKB/TrEMBL:Q9GNJ5" /translation="MNNVEPMLCLIGPNGIGHHLKKQLLFKTIATNCINNKQQQHDVD GKEEDDDEEVRVFFPGGQRGLLMERGRADRVLFYFPGANFSNRRPHFIMERTTTEGRN RWRWSGVELDRDHTHKISNHNGLRWNDGLEWNNRDQRTGWIKMADGRRRRRRRRRRMD RDGSGWIEVDRGGSGWIEVDRDGSGWIGMDGSGGSECMKGSGRNNDGNPKDRKTVRKN SNDA" ORIGIN 1 cgttcgaatt ttttcttacc gttttccgat ctttcggatt tccatcgttg tttcgtcccg 61 atcctttcat acattccgat cctcccgatc catccatccc gatccatccc gatccatccc 121 gatccacctc gatccatccc gatccacctc gatccacctc gatccatccc gatccatccc 181 gatccatcct tcgtcgtcgt cgtcgtcgtc gtcgtcgtcc atccgccatc ttgatccatc 241 ctgtccgctg atcccgattg ttccattcga gtccatcgtt ccatctcaat ccattgtggt 301 tcgagatctt gtgagtgtga tctcgatcca attcaactcc agaccatcgc caccggtttc 361 ttccttccgt cgtcgttcgt tccattatga aatctgtaaa aaaccacatt tttgtaaagc 421 aggaaataaa taattctttg aaataatctg gactttttga aatgctgatt caagtttttt 481 gttgaatctt tattgctcga attttgactg agttttgatt tttatgttga tttttgagtt 541 tcgcaaaaat attattctat aaatttcgga attattcgtt ttgagaagga aattcatcac 601 acggggtcgc ctattcgaaa agtttgctcc tgggaagtag aagagcacgc ggtcagctct 661 ccccctctcc atcagaagac ctctttggcc tcctgggaag aagactcctg ggaagaaaaa 721 atgccggagg aggggggggg gtcattcggt cgggatattc cggattggcc ccgcccacag 781 aactgtgcct tgaaaatcca tgtttcattt ttgaaaccgt tttgcaaggt acagttctgt 841 gggcggggcc aatccggaat tccccgaccg aatgattccc cccgaaacta tttggaactc 901 gtgagagctt ttatttcgaa aaaaatcctg aattttcaga aattttattt caggattgaa 961 aaagaaaaat tcggtttcgg caaaaaataa tgattccact ttttgggatc tttgattttt 1021 gtaaactaaa gttcgaattt ttgaatcaaa aattttgaaa atttagaaat aaaatcttac 1081 gtacctcctc gtcgtcgtcc tcttcctttc cgtctacgtc gtgctgttgt tgcttgttgt 1141 tgatgcagtt ggtggcgata gttttgaata ggagttgctt cttcaagtga tgtcctatac 1201 cgttaggact gcacaatatc actcaatagt gaaccatata gcaaaaacca cccgataaga 1261 cacaacatcg gttctacatt gttcatctag gatcagaagt actagcattc cctattggtc 1321 aattagcctt tattcactac ctctgagtac ggtataagaa aagcttaagc ctcaattccg 1381 atctaccgtt ttagacagtt gtctaaaagg tgtaatattt gaacttctgt ttgtagaagt 1441 taacttctgt gtgtagaagt ttaatataaa taacaaaatt tagaagttta gataaattaa 1501 ctaacttctg tttagaaaag actgattttt taaatactat aagaactatt tctaagaaac 1561 ttctgtcctt agaagtttca gactaaaaga ctaagagtgc tctatctatg tgagaattgg 1621 aaattgggaa tgggaaaaaa gaaggagaga gaaatccttc gatcgagatt actgttccaa 1681 ttacagttgt caaaatccat cgtcgatcca tccatcgtcg atccatccat cgtcgatcca 1741 tccatccatc gactttgcaa agggaagggg agagggtaaa agggaaggga gaagggagaa 1801 ggataacggg agaagggaat gggaatttga aaaatcacaa gaagagcact ttaaaaaact 1861 ttgaaagatg agaagagtta caactcttct tttttttgaa aaaaaaatta attagcttag 1921 ctcaagttaa aatttagatc ggaaatcttc ttcaaactaa tcaactcagg acaaaaaaag 1981 aaagctgtag caaaaccagc taaaagacct agggttgttt tccttaactg atccacagaa 2041 cacgaatccc taaattggcc tagtgcaagc accctaatca gatggccctc gccaggaacc 2101 ctttatattt gagtggatcg cactcacaag aaggggggta agcaaaaaaa atgaatgacc 2161 gaaaacatct gtgtcgatct agctgcctgc aaacgcggcg ttttcggtgt gcacatagcg 2221 atcgatatag aatcacatac acaaccaggt ttctgggaag atctctctct ctcctccctc 2281 tcctctctct ctctctctgg ggagactata tagattggtg tcgctctcct ttgagtagtt 2341 gaccactgtt gtctgcaaat ctg //