ID AB180674 standard; genomic DNA; PRO; 5558 BP. XX AC AB180674; XX SV AB180674.1 XX DT 01-DEC-2004 (Rel. 82, Created) DT 01-DEC-2004 (Rel. 82, Last updated, Version 1) XX DE Salmonella enterica subsp. enterica serovar Enteritidis tnpAIS26cp2, bla, DE tnpA, iron genes for TnpAIS26cp2, extended-spectrum beta-lactamase DE CTX-M-14, IS903D transposase, complete cds. XX KW . XX OS Salmonella enterica subsp. enterica serovar Enteritidis OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella; Salmonella enterica. OG Plasmid pS12 XX RN [1] RP 1-5558 RA Izumiya H., Mori K., Higashide M., Terajima J., Tamura K., Watanabe H.; RT ; RL Submitted (27-MAY-2004) to the EMBL/GenBank/DDBJ databases. RL Hidemasa Izumiya, National Institute of Infectious Diseases, Department of RL Bacteriology; Toyama 1-23-1, Shinjuku-ku, Tokyo, 162-8640, Japan RL (E-mail:izumiya@nih.go.jp, Tel:81-3-5285-1111, Fax:81-3-5285-1163) XX RN [2] RA Izumiya H., Mori K., Higashide M., Tamura K., Terajima J., Watanabe H.; RT "Characterization of the first isolate of a CTX-resistant Salmonella RT enterica serovar Enteritidis, Japan"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..5558 FT /country="Japan" FT /db_xref="taxon:149539" FT /mol_type="genomic DNA" FT /organism="Salmonella enterica subsp. enterica serovar FT Enteritidis" FT /plasmid="pS12" FT /serovar="Enteritidis" FT /sub_species="enterica" FT repeat_region 988..1797 FT /insertion_seq="IS26" FT repeat_region 988..1001 FT /note="IS26" FT /rpt_type=INVERTED FT CDS complement(1040..1756) FT /codon_start=1 FT /note="similar to Escherichia coli IS26cp2 transposase in FT AF550679" FT /transl_table=11 FT /gene="tnpAIS26cp2" FT /product="TnpAIS26cp2" FT /protein_id="BAD72946.1" FT /translation="MELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVN FT VDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR FT TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSD FT VEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY FT GDPLGEMRLVSRVFEM" FT repeat_region 1794..1797 FT /note="IS26" FT /rpt_type=INVERTED FT -35_signal 2272..2277 FT /note="putative ISEcp1B-mediated promoter sequence" FT -10_signal 2296..2301 FT /note="putative ISEcp1B-mediated promoter sequence" FT repeat_region 2358..2375 FT /note="ISEcp1B" FT CDS 2418..3293 FT /codon_start=1 FT /transl_table=11 FT /gene="bla" FT /product="extended-spectrum beta-lactamase CTX-M-14" FT /protein_id="BAD72947.1" FT /translation="MVTKRVQRMMFAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSG FT GRLGVALIDTADNTQVLYRGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPAD FT LVNYNPIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETF FT RLDRTEPTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAA FT SIRAGLPTSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLA FT SAARIIAEGL" FT repeat_region 3296..4352 FT /insertion_seq="IS903D" FT repeat_region 3296..3314 FT /note="IS903D" FT /rpt_type=INVERTED FT CDS 3373..4296 FT /codon_start=1 FT /note="similar to Klebsiella pneumoniae IS903D transposase FT in AF458080" FT /transl_table=11 FT /gene="tnpA" FT /product="IS903D transposase" FT /protein_id="BAD72948.1" FT /translation="MAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSR FT GRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVPLRCPDYSCVSRRAKSVN FT ISFKTPTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSKTHEIICA FT DLSLNNVTDSEAFPGLIRQTHRKIRSAAADGAYDTRLCHDELRRKKISALIPPRKGAGY FT WPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQ FT VAEAMALVRALNKMTKAGMPESVRIA" FT repeat_region 4334..4352 FT /note="IS903D" FT /rpt_type=INVERTED FT CDS 4353..5450 FT /codon_start=1 FT /note="interrupted by insertion sequence IS903D" FT /note="trancated putative outermembrane receptor for iron FT transport" FT /pseudo FT /transl_table=11 FT /gene="iron" XX SQ Sequence 5558 BP; 1401 A; 1375 C; 1518 G; 1263 T; 1 other; gaattcataa tgataaaagt ggtgctaagc aagataaaat ttaaccaggc gtgaggagaa 60 ctcctcatct tcagcacgga gatccgaaaa ccccaagtta cggatccgcg gatccttcgc 120 tgccgcccgc tggtccgctt tcacaggatg tggtgtcccg ctccgctgac atgacactgt 180 atgttgtgtt tcttcccgtg ttcccgagcc agtcatcagc ggcagaaaag atcgcttcgc 240 ttattcactg atcctgattc acttccggaa agttgtaaat acgcagtaaa tcggatcatc 300 tgaaaaccac tgttcgataa tttaatggag tggttatatg cctgattatt atttcaatat 360 gtgaaatcca tttttgtgaa agtcactttc tcaacagagt agcactcatc tggcgatgat 420 tgaggtgtgg taaaattgca cggctaacta ttcaactgag gaaatgacat gtttactgca 480 ttcaatgaga gaaatgattt cagttatgct tttgaaaaaa ttcgcaatgc gatttccgcg 540 ccaggagaaa ataatgttta tgctgccaca gaattaggtc ttggcattct gctccgtaaa 600 tacgagcagt ttcgccggga gctggatgtg gccggtgagc tgggaaactg ggaatacgat 660 ctcgatacct acaatcactg tattgcggtg ctgcaacgtt acttcactgg caatccatcc 720 ggactgacag aacgtgacgc ccggatttac agtcagtacc tgcagactga gcacaaaggg 780 tttgtgaagc tggctgaaga actggcggct gaccgctgaa tacatacagt aggcgggatt 840 tccggataag gtaccgaacc ggggctgtta aaagattctg gagttgaaat gaaaaaggga 900 aaaacgttag aaccggggct gctggccagc gacagcgact ggcacaataa tgcctgcctg 960 aattacatgc cggatcatgg tacagctggc actgttgcaa agttagcgat gaggcagcct 1020 tttgtcttat tcaaaggcct tacatttcaa aaactctgct taccaggcgc atttcgccca 1080 ggggatcacc ataataaaat gctgaggcct ggcctttgcg tagtgcacgc atcacctcaa 1140 tacctttgat ggtggcgtaa gccgtcttca tggatttaaa tcccagcgtg gcgttgatta 1200 tccgtttcag tttgccatga tcgcattcaa tcacgttgtt ccggtactta atctgtcggt 1260 gttcaacgtc agacgggcac cggccttcgc gtttgagcag agcaagcgcg cgaccatagg 1320 cgggcgcttt atccgtgttg atgaatcgtg ggatctgcca cttcttcacg ttgttgagga 1380 ttttacccag aaaccggtat gcagctttgc tgttacgacg ggaggagaga taaaaatcga 1440 cagtgcggcc ccggctgtcg acggcccggt acagatacgc ccagcggcca ttgaccttca 1500 cgtaggtttc atccatgtgc cacgggcaaa gatcggaagg gttacgccag taccagcgca 1560 gccgtttttc catttcaggc gcataacgct gaacccagcg gtaaatcgtg gagtgatcga 1620 cattcactcc gcgttcagcc agcatctcct gcagctcacg gtaactgatg ccgtatttgc 1680 agtaccagcg tacggcccac agaatgatgt cacgctgaaa atgccggcct ttgaatgggt 1740 tcatgtgcag ctccatcagc aaaaggggat gataagttta tcaccaccga ctatttgcaa 1800 cagtgccgtt aatatctatt cgaagcgaat gcagattgaa gaaaccttcc gagacttgaa 1860 aagtcctgcc tacggactag gcctacgcca tagccgaacg agcagctcag agcgttttga 1920 tatcatgctg ctaatcgccc tgatgcttca actaacatgt tggcttgcgg gcgttcatgc 1980 tcagaaacaa ggttgggaca agcacttcca ggctaacaca gtcagaaatc gaaacgtact 2040 ctcaacagtt cgcttaggca tggaagtttt gcggcattct ggctacacaa taacaaggga 2100 agacttactc gtggctgcaa ccctactagc tcaaaattta ttcacacatg gttacgcttt 2160 ggggaaatta tgaggggatc tctcagaatt gagtgttgct ctgtggataa cttgcagagt 2220 ttattaagta tcattgcagc aaagatgaaa tcaatgattt atcaaaaatg attgaaaggt 2280 ggttgtaaat aatgttacaa tgtgtgagaa gcagtctaaa ttcttcgtga aatagtgatt 2340 tttgaagcta ataaaaaaca cacgtggaat ttagggaata ctgatgtaac acggattgac 2400 cgtattggga gtttgagatg gtgacaaaga gagtgcaacg gatgatgttc gcggcggcgg 2460 cgtgcattcc gctgctgctg ggcagcgcgc cgctttatgc gcagacgagt gcggtgcagc 2520 aaaagctggc ggcgctggag aaaagcagcg gagggcggct gggcgtcgcg ctcatcgata 2580 ccgcagataa tacgcaggtg ctttatcgcg gtgatgaacg ctttccaatg tgcagtacca 2640 gtaaagttat ggcggccgcg gcggtgctta agcagagtga aacgcaaaag cagctgctta 2700 atcagcctgt cgagatcaag cctgccgatc tggttaacta caatccgatt gccgaaaaac 2760 acgtcaacgg cacaatgacg ctggcagaac tgagcgcggc cgcgttgcag tacagcgaca 2820 ataccgccat gaacaaattg attgcccagc tcggtggccc gggaggcgtg acggcttttg 2880 cccgcgcgat cggcgatgag acgtttcgtc tggatcgcac tgaacctacg ctgaataccg 2940 ccattcccgg cgacccgaga gacaccacca cgccgcgggc gatggcgcag acgttgcgtc 3000 agcttacgct gggtcatgcg ctgggcgaaa cccagcgggc gcagttggtg acgtggctca 3060 aaggcaatac gaccggcgca gccagcattc gggccggctt accgacgtcg tggactgtgg 3120 gtgataagac cggcagcggc gactacggca ccaccaatga tattgcggtg atctggccgc 3180 agggtcgtgc gccgctggtt ctggtgacct attttaccca gccgcaacag aacgcagaga 3240 gccgccgcga tgtgctggct tcagcggcga gaatcatcgc cgaagggctg taactggttt 3300 tgttgaataa atcgaacttt tgctgagttg aaggatcaga tcacgtatct tcccgacaac 3360 gcagaccgtt ccgtggcaaa gcaaaagttc aaaatcacca actggcccac ctacaataaa 3420 gccctcatca accgtggctc cataactttc tggctggatg atgaagctat tcaggcctgg 3480 tatgagtcag caacaccttc ttcacgaggc agacctcagc gctattctga ccttgccatc 3540 acgactgtgc tggtcattaa acgcgtattc aggctgaccc tgcgcgctgc gcagggcttt 3600 attgattcca ttttttctct gatgaacgtt ccgctacgct gcccggatta cagctgtgtc 3660 agcaggcggg caaagtcggt taatatcagt ttcaaaacgc ccacccgggg tgaaatcgca 3720 cacctggtaa ttgattccac cgggctgaag gtcttcggtg aaggcgagtg gaaagtcaaa 3780 aagcatggcc aggaacgccg tcgtatatgg cgtaagctgc atctggcagt tgacagtaaa 3840 acacatgaaa tcatctgcgc tgacctgtcg ctgaacaacg ttacggactc agaggccttc 3900 cccgggttaa tccggcaaac ccaccggaaa atcaggtcag ccgccgccga tggagcttac 3960 gatacccggc tctgtcacga tgaactgcgg cgtaagaaaa tcagcgcgct tatcccgccc 4020 cgaaaaggtg cgggttactg gcccggtgaa tatgcagacc gtaaccgtgc agtggctaat 4080 cagcgaatga ccgggagtaa tgcgcggtgg aaatggacaa cagattacaa ccgtcgctcg 4140 atagcggaaa cggcgatgta ccgggtaaaa cagctgttcg ggggttcact gacgctgcgt 4200 gactacgatg gtcaggttgc ggaggctatg gccctggtac gagcgctgaa caaaatgacg 4260 aaagcaggta tgcctgaaag cgtgcgtatt gcctgaaaac acaacccgct acgggggaga 4320 cttacccgaa atctgattta ttcaacaaag ccacgcgctg gacacaccac gatgacagcg 4380 gttttatccc ttacgccatc accaccggcc ttgattacga ggcgatgacc gaacagcgca 4440 aaggctatga gaactttgtt tatcagaacg gcgtttacga tctcggcacc aaaggtgata 4500 tgcgacgtaa cgaacgtaac ctgatgtgga acctcgatcc ctacattcaa acgcactggc 4560 agctcacctc agccctgggg ctggacgccg gggcgcgcta tagctcggta tggtttgatt 4620 ccaacgatcg ttatgttgta ggtaaaaatg gtgatgatag cggcgaagcg agctatcaca 4680 agtggcttcc ggcggcagcg ctgaagtatg ccatgacgcc gcagtggaac gtttacctct 4740 ctgccgggag gggatttgaa acgccgacca ttaacgagct gtcctatcgt cccgatggtc 4800 agtccgggct taactttgct ctgcaaccgg ccactaacac caccgttgaa gcaggcagta 4860 aatggcaggt gggcaccggg atggcgagcc tgagcgtctt caatacggac acgaaaaatg 4920 aaattgtcgt tgccgccagc gacaatggcc gtacgtccta tcagaacgcg ggcaagacgc 4980 gccgccgcgg gntcgaactg ggatgggatc agcaatttgc gcccgcctgg cgcgccaaac 5040 tggcgtggac gctgctggat gcgacctacc gtgaaaacgc cggcgatgct attcagagcg 5100 gcaatcggat cccggggatt gcacgtaata gcgcctatgc ctcctttggc tgggtgccgg 5160 aagagggatg gtacgctggc gctgaagtcc gctatatgag cgatattcag gtcaacgatg 5220 ccaatagcga gcaggctcca gcctatacgg tgacggcact gaataccggc tataaatatg 5280 tgctagataa ctggaccgtc gacctctata cgcgcgttga taacctgttt gataagcgct 5340 acgtcggctc tgttatcgtc aacgagagca acggacgcta ttatgaaccg gcgccgggcc 5400 gtaactatgg cgttgggcta tcggtcagct atcagtttga ttcgctgtaa caatacggct 5460 gccggagagt gctattgagg tgaggctccg gcagcgggta aaggcgttga ttcctggtaa 5520 caataagctg cttattgatg tatcagtaag catgcaag 5558 //