Cluster 1 Contig 127

 

Size of Consensus sequence = 538

Number of sequences = 4

Minimum redundancy = 1

Key

A gi|26054422|gb|CA797336.1|CA797336 Cac_BL_4425 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4425 5', mRNA sequence
B gi|26054618|gb|CA797532.1|CA797532 Cac_BL_4610 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4610 5', mRNA sequence
C gi|26054400|gb|CA797314.1|CA797314 Cac_BL_4405 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4405 5', mRNA sequence
D gi|26053433|gb|CA796357.1|CA796357 Cac_BL_3370 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_3370 5', mRNA sequence

17 SNPs detected


A B C D cosegregation weighted

101 C C . - 8/17 35.29 218 T - . - 6/17 26.47 337 A T T T 6/17 35.29 377 T G G G 6/17 35.29 381 C C T C 3/17 17.65 390 - A A A 6/17 35.29 393 C T T T 6/17 35.29 400 C C T C 3/17 17.65 412 C C T C 3/17 17.65 414 C T T T 6/17 35.29 459 . A T T 8/17 35.29 461 . G T N 8/17 23.53 490 . G - - 8/17 35.29 508 . C A A 8/17 35.29 519 . G . - 8/17 23.53 526 . C . G 8/17 23.53 529 . C . G 8/17 23.53