Cluster 1 Contig 135

 

Size of Consensus sequence = 534

Number of sequences = 3

Minimum redundancy = 1

Key

A gi|26054566|gb|CA797480.1|CA797480 Cac_BL_4561 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4561 5', mRNA sequence
B gi|26053101|gb|CA796025.1|CA796025 Cac_BL_3037 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_3037 5', mRNA sequence
C gi|26054541|gb|CA797455.1|CA797455 Cac_BL_4538 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4538 5', mRNA sequence

39 SNPs detected


A B C cosegregation weighted

56 C . T 28/39 47.86 140 C T C 11/39 28.21 143 C T C 11/39 28.21 146 G A G 11/39 28.21 149 N C G 28/39 47.86 164 A C A 11/39 28.21 167 T C T 11/39 28.21 168 C T T 28/39 71.79 170 G C N 28/39 47.86 173 G A G 11/39 28.21 176 T C T 11/39 28.21 179 T C T 11/39 28.21 185 G A G 11/39 28.21 191 T C T 11/39 28.21 194 T G T 11/39 28.21 203 N C T 28/39 47.86 218 . C T 28/39 47.86 233 . C T 28/39 47.86 236 . C T 28/39 47.86 248 . A G 28/39 47.86 257 . C A 28/39 47.86 272 . G C 28/39 47.86 284 . T C 28/39 47.86 287 . T G 28/39 47.86 308 . T C 28/39 47.86 311 . C T 28/39 47.86 314 . C T 28/39 47.86 350 . T C 28/39 47.86 353 . C T 28/39 47.86 371 . A T 28/39 47.86 380 . T C 28/39 47.86 389 . C T 28/39 47.86 404 . C T 28/39 47.86 407 . T C 28/39 47.86 410 . T C 28/39 47.86 424 . C T 28/39 47.86 428 . T C 28/39 47.86 429 . T C 28/39 47.86 440 . A G 28/39 47.86