Cluster 1 Contig 175

 

Size of Consensus sequence = 512

Number of sequences = 4

Minimum redundancy = 1

Key

A gi|26051591|gb|CA794515.1|CA794515 Cac_BL_1391 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_1391 5', mRNA sequence
B gi|26054143|gb|CA797057.1|CA797057 Cac_BL_4139 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4139 5', mRNA sequence
C gi|26054162|gb|CA797076.1|CA797076 Cac_BL_4161 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4161 5', mRNA sequence
D gi|26052476|gb|CA795400.1|CA795400 Cac_BL_244 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_244 5', mRNA sequence

21 SNPs detected


A B C D cosegregation weighted

39 - T - . 15/21 53.57 42 T G T . 15/21 53.57 73 T T C . 1/21 3.57 338 . G G T 5/21 17.86 346 . A A T 5/21 17.86 347 . G G C 5/21 17.86 357 . T T C 5/21 17.86 388 . G G T 5/21 17.86 395 . G C C 15/21 53.57 398 . . T A 15/21 35.71 404 . . C T 15/21 35.71 418 . . T A 15/21 35.71 440 . . T A 15/21 35.71 442 . . G T 15/21 35.71 452 . . G T 15/21 35.71 461 . . G T 15/21 35.71 465 . . - T 15/21 35.71 472 . . A T 15/21 35.71 474 . . - C 15/21 35.71 477 . . G T 15/21 35.71 482 . . - T 15/21 35.71