Cluster 1 Contig 357

 

Size of Consensus sequence = 448

Number of sequences = 4

Minimum redundancy = 1

Key

A gi|26054831|gb|CA797745.1|CA797745 Cac_BL_4871 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4871 5', mRNA sequence
B gi|26055135|gb|CA798049.1|CA798049 Cac_BL_5317 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_5317 5', mRNA sequence
C gi|26052344|gb|CA795268.1|CA795268 Cac_BL_2302 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_2302 5', mRNA sequence
D gi|26054773|gb|CA797687.1|CA797687 Cac_BL_4772 Cac_BL (Bean and Leaf from Amelonardo type Cacao) Theobroma cacao cDNA clone Cac_BL_4772 5', mRNA sequence

38 SNPs detected


A B C D cosegregation weighted

46 . G C . 7/38 9.21 54 . - C . 7/38 9.21 55 . - T . 7/38 9.21 114 . G A . 7/38 9.21 162 . G G A 31/38 61.18 170 . G G A 31/38 61.18 195 . A A G 31/38 61.18 205 . A A G 31/38 61.18 206 . A A T 31/38 61.18 207 . A A G 31/38 61.18 208 . G G A 31/38 61.18 211 . C C A 31/38 61.18 219 . C C G 31/38 61.18 221 . C C G 31/38 61.18 233 A A A G 31/38 81.58 236 A A A G 31/38 81.58 258 C C C G 31/38 81.58 266 G G G A 31/38 81.58 288 G G G A 31/38 81.58 303 G G G C 31/38 81.58 323 . A A G 31/38 61.18 339 . G G A 31/38 61.18 340 . A A C 31/38 61.18 354 . T T G 31/38 61.18 365 . T T C 31/38 61.18 366 . A A G 31/38 61.18 371 . C C T 31/38 61.18 377 . C C T 31/38 61.18 381 . A T T 7/38 13.82 387 . C C G 31/38 61.18 389 . C C T 31/38 61.18 390 . C C T 31/38 61.18 397 . G G T 31/38 61.18 398 . C C T 31/38 61.18 399 . T T A 31/38 61.18 401 . G G C 31/38 61.18 408 . . A G 7/38 9.21 442 . . G A 7/38 9.21