RESULTS SUMMARY
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Total sequences analysed = 3254
  Sequences sorted into 424 contigs and 0 singletons
  Total SNPs detected = 2204
  Total consensus size = 215576 bp
  SNP frequency = 1.02/100 bp
  Smallest contig = 2 sequences
  Total transitions = 556
  Total transversions = 705
  Total indels = 943

  197 contigs containing 2 sequences
  163(82.74)% of these contigs contain snps    with a total of 887 snps

  63 contigs containing 3 sequences

    58(92.06)% of these contigs contain snps    with a total of 566 snps

  38 contigs containing 4 sequences

    36(94.74)% of these contigs contain snps    with a total of 446 snps

  42 contigs containing 5 sequences

    16(38.10)% of these contigs contain snps    with a total of 37 snps

  11 contigs containing 6 sequences

    6(54.55)% of these contigs contain snps    with a total of 19 snps

  15 contigs containing 7 sequences

    2(13.33)% of these contigs contain snps    with a total of 2 snps

  8 contigs containing 8 sequences

    4(50.00)% of these contigs contain snps    with a total of 5 snps

  8 contigs containing 9 sequences

    (0.00)% of these contigs contain snps

  3 contigs containing 10 sequences

    (0.00)% of these contigs contain snps

  4 contigs containing 11 sequences

    (0.00)% of these contigs contain snps

  7 contigs containing 12 sequences

    1(14.29)% of these contigs contain snps    with a total of 1 snps

  2 contigs containing 13 sequences

    (0.00)% of these contigs contain snps

  2 contigs containing 14 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 15 sequences

    (0.00)% of these contigs contain snps

  4 contigs containing 16 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 17 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 18 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 19 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 20 sequences

    (0.00)% of these contigs contain snps

  2 contigs containing 22 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 23 sequences

    (0.00)% of these contigs contain snps

  2 contigs containing 25 sequences

    1(50.00)% of these contigs contain snps    with a total of 1 snps

  2 contigs containing 27 sequences

    2(100.00)% of these contigs contain snps    with a total of 2 snps

  1 contigs containing 30 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 42 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 58 sequences

    1(100.00)% of these contigs contain snps    with a total of 4 snps

  1 contigs containing 163 sequences

    1(100.00)% of these contigs contain snps    with a total of 31 snps

  1 contigs containing 188 sequences

    1(100.00)% of these contigs contain snps    with a total of 28 snps

  1 contigs containing 216 sequences

    1(100.00)% of these contigs contain snps    with a total of 27 snps

  1 contigs containing 352 sequences

    1(100.00)% of these contigs contain snps    with a total of 64 snps

  1 contigs containing 417 sequences

    1(100.00)% of these contigs contain snps

    with a total of 84 snps