Size of Consensus sequence = 681

Number of sequences = 4

Minimum redundancy = 1

A gi|38499939|gb|CF974179.1|CF974179 PSU_meup2.1\G04 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence
B gi|38499943|gb|CF974183.1|CF974183 PSU_meup2.1\G08 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence
C gi|38499825|gb|CF974065.1|CF974065 PSU_meup1\C12 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence
D gi|38499955|gb|CF974195.1|CF974195 PSU_meup2.1\H09 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence

46 SNPs detected

	A B C D 	       cosegregation		weighted
16	A A C . 		29/46			47.28
35	C C T . 		29/46			47.28
40	A A C . 		29/46			47.28
41	G G C . 		29/46			47.28
45	T T C . 		29/46			47.28
59	A A C . 		29/46			47.28
89	A A G . 		29/46			47.28
101	G G C . 		29/46			47.28
119	T T C . 		29/46			47.28
124	G G T . 		29/46			47.28
126	C C T . 		29/46			47.28
129	C C T . 		29/46			47.28
133	C C A . 		29/46			47.28
145	T T C . 		29/46			47.28
153	G G A . 		29/46			47.28
197	T T C . 		29/46			47.28
207	T T G G 		29/46			63.04
214	A A A T 		16/46			34.78
216	T T C T 		29/46			63.04
302	T T A T 		29/46			63.04
316	T T T A 		16/46			34.78
317	A A A C 		16/46			34.78
326	G G C G 		29/46			63.04
329	A A A C 		16/46			34.78
342	C C C A 		16/46			34.78
347	C C T T 		29/46			63.04
377	A A A C 		16/46			34.78
385	C C T C 		29/46			63.04
387	A A A C 		16/46			34.78
407	A A A G 		16/46			34.78
410	C C C T 		16/46			34.78
441	C C C T 		16/46			34.78
482	G G A A 		29/46			63.04
486	A A A G 		16/46			34.78
499	G G A G 		29/46			63.04
502	C C A A 		29/46			63.04
506	A A A G 		16/46			34.78
539	T T G G 		29/46			63.04
563	A A A G 		16/46			34.78
575	C C G G 		29/46			63.04
593	G G G A 		16/46			34.78
599	C C C T 		16/46			34.78
626	A A A C 		16/46			34.78
637	G N T T 		29/46			15.76
659	A C A A 		1/46			2.17
680	G . A A 		29/46			47.28