Cluster 1 Contig 20

Size of Consensus sequence = 502

Number of sequences = 3

Minimum redundancy = 1

Key

A gi|38499865|gb|CF974105.1|CF974105 PSU_meup1\G09 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence
B gi|38500461|gb|CF974701.1|CF974701 PSU_weup3.2A03 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence
C gi|38499952|gb|CF974192.1|CF974192 PSU_meup2.1\H06 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence

40 SNPs detected


A B C cosegregation weighted

72 A T T 40/40 100.00 79 A G G 40/40 100.00 92 G C C 40/40 100.00 100 G C C 40/40 100.00 102 G A A 40/40 100.00 103 G A A 40/40 100.00 104 G A A 40/40 100.00 120 T C C 40/40 100.00 123 A C C 40/40 100.00 125 T C C 40/40 100.00 131 G T T 40/40 100.00 132 A G G 40/40 100.00 138 C T T 40/40 100.00 139 A G G 40/40 100.00 140 G A A 40/40 100.00 145 G C C 40/40 100.00 146 G A A 40/40 100.00 155 G T T 40/40 100.00 167 A G G 40/40 100.00 175 A T T 40/40 100.00 204 T C C 40/40 100.00 217 T A A 40/40 100.00 231 T C C 40/40 100.00 238 G A A 40/40 100.00 255 C A A 40/40 100.00 261 G A A 40/40 100.00 269 - T T 40/40 100.00 270 - T T 40/40 100.00 271 - G G 40/40 100.00 273 C A A 40/40 100.00 275 G A A 40/40 100.00 276 T C C 40/40 100.00 278 G A A 40/40 100.00 280 A C C 40/40 100.00 313 T C C 40/40 100.00 326 G A A 40/40 100.00 333 T A A 40/40 100.00 337 A G G 40/40 100.00 339 C N T 40/40 33.33 363 C T T 40/40 100.00