Accession No | SSR Type | SSR | Start | End | Left Primer | Left TM | Left Primer Start,Size | Right Primer | Right TM | Right Primer Start,Size |
About 65 entries found
CN599671 |
compound |
(GCC)5aaggccccggtaatggtcggccggaatgctgctgtca(CGG)5 |
97 |
163 |
ACACCAATGCTGCTGTTGCT |
61.87 |
77,20 |
AACTGCCATTGGGAATCATC |
59.76 |
259,20 |
CN600010 |
compound |
(A)44ctcgagccaaaacctccacctcgtcgccgttgccagcttcccatgcacccacctagccgaatgctannttattgaggtcgccgtggaggtggta(GTG)5 |
142 |
294 |
TGGGTTTATTTGCCCTTTCA |
60.29 |
119,20 |
ATGACCATGACCCTCCGTTT |
61.55 |
351,20 |
CN600204 |
compound |
(T)12gataacatgaaacataaactcactttcatagttcaaaacatgtgcccgaggtatctactttcattatgatcaatt(A)14 |
140 |
240 |
GCCATAGGATCTGGAGGACA |
60.03 |
22,20 |
AATGATAATTAGCCGTGGAGAA |
57.80 |
263,22 |
CN600270 |
compound |
(AGC)6agagtccttcacactcccaactctcccatcccactttccaagaagc(CCA)5 |
74 |
152 |
CAGTACGCCATATCCCCATC |
60.18 |
34,20 |
CAGCTCCTCATCCTCACTCC |
59.94 |
216,20 |
CN600809 |
compound |
(A)11gggctccttta(TC)7 |
33 |
68 |
CTGCATCAGCGCAAAATAAA |
59.98 |
1,20 |
ACGATGTCGAGCTCATCCTT |
59.83 |
177,20 |
CN600893 |
compound |
(TG)7c(GT)8 |
62 |
92 |
TCCTCAAGTTCTGCTCTGTGTC |
59.65 |
16,22 |
TCCCCAACGGTAACACATTT |
60.09 |
198,20 |
CN601288 |
compound |
(CAC)5ctcctcatgtttactactataaat(CAC)6 |
165 |
221 |
CATCACCAACACCATCCAAG |
59.81 |
123,20 |
AGGAGGTGGTGGAGGAGACT |
60.11 |
328,20 |
CN601359 |
compound |
(TA)6cacacccacacttcagtggaataggtgacatagtgattaccactacccc(AG)7 |
47 |
121 |
CGCCATCTAACACTCTTCCA |
58.87 |
10,20 |
TGAGCCATGTTCCGATGTAA |
60.07 |
192,20 |
CN601382 |
compound |
(CAC)5caactcgcccaccctctctctctttttgggagagaaaccaagcaagcgtgaagagtatnnngaaggcggt(AG)10 |
106 |
210 |
CAGCGGAGGGAGTGATTAAA |
60.21 |
61,20 |
CTCGTTCGCCTTCTCCATC |
60.90 |
232,19 |
CN601534 |
compound |
(T)13ctctttca(GTT)10cttatc(ATT)5 |
67 |
138 |
TTCCCACCCAACATTCTCTC |
59.90 |
19,20 |
AGGATGGTGACCCTCGAGTA |
59.53 |
188,20 |
CN601764 |
compound |
(CT)6cgcncnnnttcctctgggcccgccatgaaaacctcctcccttggggcattcaagacctcgtccacctccctctccggcagatcaaaggctcgag(T)10a(T)17 |
154 |
287 |
CCCTTCGTTCCATCTCAGAA |
60.19 |
85,20 |
GAAATGTCTGGGATCGCTTT |
59.13 |
334,20 |
CN599509 |
monomer |
(A)23 |
87 |
109 |
TTGATGCCTGATCAAATTCAAG |
60.07 |
18,22 |
TGTGCCAGTACATAAGCTCCA |
59.36 |
236,21 |
CN600012 |
monomer |
(T)42 |
96 |
137 |
TTTCTTCATTATCTGCCTGCAT |
58.86 |
3,22 |
TAAGTGCGTGGTTTTGCTTG |
59.91 |
207,20 |
CN599947 |
dimer |
(AG)10 |
29 |
48 |
TGCGTGCGTGTGTGTGAT |
62.14 |
11,18 |
GGGGGAAGAAGAAGGGATTT |
60.61 |
231,20 |
CN600775 |
dimer |
(AG)11 |
25 |
46 |
TGCGCTCTCTCTCTGTCTCC |
61.00 |
1,20 |
AGCAGGACCCATTATCGTTG |
59.96 |
225,20 |
CN599614 |
dimer |
(AT)10 |
45 |
64 |
TTTGAGTGGCACCTGGAAAT |
60.50 |
22,20 |
GCCAGGAAGTTTGTGGAGAG |
59.84 |
238,20 |
CN599504 |
dimer |
(CT)10 |
27 |
46 |
CCCCTCCAGTCCCCACTC |
62.92 |
9,18 |
CTCGAGAACCTTGCCGAAG |
61.06 |
213,19 |
CN600166 |
trimer |
(CAC)7 |
439 |
459 |
ATCTTCGGGTCCTGTTGTTG |
59.97 |
332,20 |
GGGACTGGATGGACCATTAT |
58.52 |
488,20 |
CN599492 |
hexamer |
(CTCTCC)6 |
88 |
111 |
GAAAGCCCAAACCCTCTCTC |
60.19 |
52,20 |
CCGTAGTCGTCGTCGATGT |
59.72 |
241,19 |
CN599632 |
hexamer |
(GGAGAG)6 |
125 |
148 |
ATGACAATTTGTGGCGATGA |
59.93 |
17,20 |
AAACATGCTTTCAGGGCATT |
59.57 |
240,20 |
CN600768 |
nanomer |
(TTTCCTTTG)9 |
196 |
222 |
ATCCCTTTCTCTCCCTCCAA |
60.01 |
72,20 |
ATCCCCAGATGTGACCATGT |
60.06 |
286,20 |
CN600733 |
eleven repeat |
(CTCTTAGCTAA)11 |
109 |
141 |
ACTCCCCTTCATCTCCCTTG |
60.45 |
81,20 |
CAGGAATAGGGATTGCAGGA |
60.03 |
256,20 |
CN601246 |
immperfect dimer |
CTCTCTCTCTTCTCTCTCGCTCTCTC |
62 |
87 |
GGGAGTGAGAGAGACAGTGA |
55.21 |
5,20 |
GAAGACACCAACTCTTCAGC |
54.952 |
353,20 |
CN601514 |
dimer |
(GA)11 |
322 |
343 |
CTTCGTCAGGATTAATTTGG |
54.909 |
238,20 |
TTGACTCACTCCAATTCCTT |
54.727 |
402,20 |
CN601118 |
dimer |
(TC)11 |
108 |
129 |
AATTCAAACGCGTGAACC |
57.081 |
41,18 |
AGAGAGCGAGAGAGAGACG |
54.915 |
238,19 |
CN601118 |
immperfect dimer |
TCTCTCTCTCGCTCTCTNNC |
223 |
242 |
AATTCAAACGCGTGAACC |
57.081 |
41,18 |
AGAGAGCGAGAGACCGTG |
56.585 |
273,18 |
CN600134 |
immperfect dimer |
TCTCTCTCGCTCTCTCTCTCTCTATCTCTCTCTCT |
53 |
87 |
GAAAGAAGGGAAGAGGAGAG |
54.797 |
3,20 |
TTCTGAACACAGTGTATGCC |
54.549 |
321,20 |
CN599594 |
immperfect dimer |
TCTCTCTCTCTCTATCTCTCT |
172 |
192 |
GGGTGACGAGTCTGAGTAAA |
55.276 |
9,20 |
TTTCCAGCTTCCTTTCAGTA |
55.263 |
267,20 |
CN601340 |
immperfect dimer |
CAGCAGCAGCAGCNNNAGCAG |
231 |
251 |
TTCTTTGTAAGCCCTAACCTT |
55.021 |
89,21 |
TCCACTTAGGATTGGCTCTA |
55.052 |
310,20 |
CN600035 |
immperfect dimer |
CAGCAGCAGCAGCAACAGCAGCAG |
252 |
275 |
ATCAACCATGTACAGTCCCT |
54.264 |
47,20 |
GTTGATGAAGAGGTGCGA |
55.523 |
355,18 |
CN599409 |
immperfect dimer |
CGCCGCCGCCGCCGCCACCGCCGCC |
132 |
155 |
GATCTCTCCGTCTAGCGTC |
54.974 |
3,19 |
CATATGGTAGTTTAAGGCGG |
54.998 |
193,20 |
CN600270 |
trinculeotide |
AGCAGCAGCAGCAGCAGCAG |
74 |
93 |
GTAGACAAACGGAAGAACCA |
55.288 |
11,20 |
TTATCTCTGAGACCCAGGAA |
54.824 |
238,20 |
CN601698 |
immperfect dimer |
GCGGCGGCGGTGGCGGCGGCGGCGGC |
129 |
154 |
GAACTCCACGCTAATCAATC |
54.86 |
14,20 |
CCTCAGAGATCTTGTCCTTG |
54.889 |
263,20 |
CN600451 |
immperfect trimer |
CAGCANNNGCAGCAGCCGCAGCAGCAG |
151 |
177 |
GCTATAGAGTTCCGATGCC |
54.966 |
76,19 |
GCAGGAAGTACATGGGAAT |
54.958 |
300,19 |
CN600784 |
trimer |
CCGCCGCCGCCGCCGCCGCC |
182 |
201 |
TGTTCCTTAATTCCATCGTC |
55.134 |
40,20 |
GTGGTAGAGGTGCTGATAGG |
54.803 |
239,20 |
BM402089 |
immperfect trimer |
AAGAAGAAGAAGAGGAAGAAGAA |
280 |
302 |
ATGCTTCTTTCACCTCTTCA |
55.07 |
64,20 |
ATGCTTCTTTCACCTCTTCA |
54.946 |
427,20 |
CN600203 |
immperfect trimer |
GGAGGAGGAGGAAGAGGAAGGAGGAGG |
299 |
325 |
TGCTGAGGAGGTATTTGTTT |
54.959 |
157,20 |
GATCCGGTCATGGACATC |
56.968 |
397,18 |
CN601084 |
immperfect trimer |
GGAGGAGGAGGAGGGGAGGAG |
190 |
210 |
AATTGAAGCTTAGGAAACCC |
55.143 |
89,20 |
CTTTAGGAGTTTGTCCTCCC |
55.458 |
352,20 |
CN601436 |
immperfect trimer |
GGCGGCGGCGGCGGTGGCGGCG |
209 |
230 |
CTCCATTTCTTCTTCCCTCT |
55.089 |
67,20 |
GAACCAGTCTACTGTCGAGC |
54.99 |
272,20 |
CN601383 |
immperfect trimer |
TCCTCCTCCTCATCCTCATCCTCCTC |
106 |
131 |
TTCCTCTCCTCTTCTTCTCC |
55.204 |
73,20 |
AAATAGCTCTCTGACCACCA |
54.937 |
434,20 |
CN601579 |
immperfect trimer |
TGCTGCTGCCGCTGCTGCTGCT |
192 |
213 |
GAGGTACAGAACGTTCAAGC |
55.011 |
72,20 |
GATGGAGTAAGCCTGGTTG |
55.659 |
360,19 |
CN599796 |
immperfect trimer |
TGCTGCTGCCGCTGCTGCTGCT |
45 |
66 |
GACACCATGTTGCTGCTC |
55.946 |
13,18 |
GGAGGCGGATGGAGTAAG |
58.172 |
220,18 |
CN601696 |
immperfect pentamer |
CCCGCCCCGCNNNNNNNCGCC |
52 |
72 |
GACATGACCAACGAGGAGTA |
56.034 |
11,20 |
CGTTGTAACGGTAGCGGTC |
59.209 |
110,19 |
CN601501 |
immperfect pentamer |
TTTTCTTTTCTTTTCTTTTNTNTTCTTTT |
300 |
328 |
AGAGAAATTGTAGGGTCGGT |
55.321 |
76,20 |
GGTCCATCATAGAGGGAGAT |
55.408 |
370,20 |
CN601382 |
dinucleotide |
AGAGAGAGAGAGAGAGAGAG |
191 |
210 |
CATGCCCTAATAGAGAGACG |
55.088 |
84,20 |
GTTCCAGGTCTGGGAGAG |
315,18 |
55.425 |
CN600084 |
dinucleotide |
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG |
123 |
154 |
TAATGATTTCTGTGCTGCTG |
55.031 |
35,20 |
TATAGGAGGAATGGCTCAAA |
185,20 |
54.988 |
CN599573 |
dinucleotide |
ATATATATATATATATATATATATA |
77 |
101 |
TTTGATTGCAAGATGAACC |
54.524 |
40,19 |
TCTTCCTCCGCTACGATAC |
313,19 |
55.481 |
CN601087 |
dinucleotide |
CTCTCTCTCTCTCTCTCTCT |
114 |
133 |
CGCCTTCATAACTCTCAACT |
54.699 |
80,20 |
TGTTTGTTCCTACCATCCTT |
283,20 |
54.625 |
CN600785 |
dinucleotide |
CTCTCTCTCTCTCTCTCTCTC |
182 |
202 |
GAGAGAGCTCTGAGTTCCAA |
54.736 |
1,20 |
TCTACTCCGAGTCTCGATCA |
244,20 |
55.998 |
CN599840 |
dinucleotide |
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT |
77 |
110 |
CCTGCTCTTCTCTTGCTATC |
54.479 |
25,20 |
TCTACAAACACACCAAGCAG |
206,20 |
54.838 |
CN600805 |
dinucleotide |
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT |
126 |
161 |
GGTCACCGAACCCTAATAA |
54.992 |
36,19 |
GGATCCCTTTATGCTTTCTT |
256,20 |
55.065 |
CN601779 |
tetranucleotide |
GAGGGAGGGAGGGAGGGAGG |
111 |
130 |
GGCCTCTCTACTCTCCAGTT |
55.18 |
36,20 |
AAATCCAAGACCAAGACAAA |
303,20 |
54.756 |
CN601771 |
tetranucleotide |
TATGTATGTATGTATGTATG |
442 |
461 |
GAGAAGGTAAAGGAGGAGGA |
55.089 |
218,20 |
TAGACCCGACCATTAAACC |
556,19 |
54.992 |
CN601251 |
tetranucleotide |
TTTATTTATTTATTTATTTAT |
153 |
173 |
ACAGAGAGAAAGGAAGAGGG |
55.157 |
86,20 |
ACCAGAAGAAGAACCAACAA |
386,20 |
54.817 |
CN599831 |
trinucleotide |
AGGAGGAGGAGGAGGAGGAGGAGGAGGAG |
281 |
309 |
GTTGGCTCTTATTTCTCCAC |
53.999 |
66,20 |
CCAAAGTACAGCTTGGTGTT |
391,20 |
55.405 |
CN600749 |
trinucleotide |
CAGCAGCAGCAGCAGCAGCAG |
198 |
218 |
TTCTTTGTAAGCCCTAACCTT |
55.021 |
56,21 |
TCCACTTAGGATTGGCTCTA |
277,20 |
55.052 |
CN601178 |
trinucleotide |
CAGCAGCAGCAGCAGCAGCAG |
196 |
216 |
TTTCTTTGTAAGCCCTAACCT |
55.021 |
53,21 |
GGCAGATTTCCACTTAGGAT |
283,20 |
55.814 |
CN601056 |
trinucleotide |
CCGCCGCCGCCGCCGCCGCCGCCGCC |
90 |
115 |
TCCAAATGAAGAGGAAGAGA |
54.959 |
18,20 |
GTCCAAGTCCAAGTCTATGC |
190,20 |
54.751 |
CN601342 |
trinucleotide |
CCTCCTCCTCCTCCTCCTCCTC |
50 |
71 |
TTCTGCCCATAGAAGAAAGA |
55.181 |
8,20 |
TAGTCTTGCCCTGCTGTATT |
385,20 |
55.159 |
CN601445 |
trinucleotide |
CCTCCTCCTCCTCCTCCTCCTC |
96 |
117 |
TTCTGCCCATAGAAGAAAGA |
55.181 |
54,20 |
TAGTCTTGCCCTGCTGTATT |
431,20 |
55.159 |
CN601492 |
trinucleotide |
CCTCCTCCTCCTCCTCCTCCTCCTCCTCC |
183 |
211 |
CTTCAAGAAGCCCAAGAAC |
55.058 |
141,19 |
GCTCGCACTCCCAGAAGA |
277,18 |
60.23 |
CN600706 |
trinucleotide |
CGACGACGACGACGACGACGACG |
224 |
246 |
GCAAGACTCCAAACAAGAAG |
55.156 |
102,20 |
TCATCACCTTCAGAATCTCC |
411,20 |
55.062 |
CN600741 |
trinucleotide |
GAGGAGGAGGAGGAGGAGGAGGAG |
206 |
229 |
ACCAAGATCACCTTCAAGAC |
54.086 |
145,20 |
TCATAGTGCAACGTCCATAA |
306,20 |
55.166 |
CN599974 |
trinucleotide |
TTATTATTATTATTATTATTATT |
184 |
206 |
GGAAACAGGAGAAGGGAAT |
55.609 |
145,19 |
GTGGAAGGAGTTCCGATG |
304,18 |
56.402 |
|
|
|
|
|
|
|
|
|
|
|