RESULTS SUMMARY

View contig list

  Total sequences analysed = 242
  Sequences sorted into 86 contigs and 0 singletons
  Total SNPs detected = 309
  Total consensus size = 35034 bp
  SNP frequency = 0.88/100 bp
  Smallest contig = 2 sequences
  Total transitions = 185
  Total transversions = 111
  Total indels = 13

 55 contigs containing 2 sequences

19(34.55)% of these contigs contain snps

with a total of 147 snps

 17 contigs containing 3 sequences

  10(58.82)% of these contigs contain snps

    with a total of 86 snps

  8 contigs containing 4 sequences

    8(100.00)% of these contigs contain snps

    with a total of 72 snps

  2 contigs containing 5 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 6 sequences

    1(100.00)% of these contigs contain snps

    with a total of 2 snps

  1 contigs containing 8 sequences

    1(100.00)% of these contigs contain snps

    with a total of 2 snps

  1 contigs containing 12 sequences

    (0.00)% of these contigs contain snps

  1 contigs containing 13 sequences

    (0.00)% of these contigs contain snps