Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168922888-8614-33467240655.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig3 Length=565
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|92886153|gb|ABE88158.1| Heat shock protein Hsp20 [Medicago tr 98.2 2e-20 gi|56606538|gb|AAW02791.1| heat shock protein 18 [Codonopsis lan 97.1 4e-20 gi|82941445|dbj|BAE48789.1| heat shock protein 18 [Codonopsis la 97.1 4e-20 gi|123552|sp|P27397|HSP12_DAUCA 18.0 kDa class I heat shock p... 96.3 7e-20 gi|75279027|sp|O82012|HSP12_SOLPE 17.6 kDa class I heat shock... 95.9 9e-20 gi|18073562|emb|CAC84406.1| 17.6 kDa heat-shock protein [Heliant 95.1 1e-19 gi|224545|prf||1107298A protein,small heat shock 94.7 2e-19 gi|18073561|emb|CAC84405.1| 20.5 kDa heat-shock protein [Heliant 94.4 3e-19 gi|1235898|gb|AAB63311.1| 17.7 kDa heat shock protein [Helianthu 94.4 3e-19 gi|15222395|ref|NP_172220.1| unknown protein [Arabidopsis tha... 94.4 3e-19 gi|3341464|emb|CAA12387.1| Hsp20.1 protein [Solanum peruvianum] 93.2 6e-19 gi|22335|emb|CAA46641.1| heat shock protein 17.2 [Zea mays] 93.2 6e-19 gi|37704433|gb|AAR01521.1| cytosolic class I small heat shock... 93.2 6e-19 gi|38639431|gb|AAR25848.1| 17.5 kDa class I heat shock protein [ 92.8 7e-19 gi|11990130|emb|CAB55634.2| 17.9 kDa heat-shock protein [Heliant 92.8 7e-19 gi|123556|sp|P27880|HSP12_MEDSA 18.2 kDa class I heat shock p... 92.8 7e-19 gi|462322|sp|Q05832|HSP11_CHERU 18.3 kDa class I heat shock p... 92.8 7e-19 gi|123539|sp|P04794|HSP14_SOYBN 17.5 kDa class I heat shock p... 92.8 7e-19 gi|123548|sp|P27396|HSP11_DAUCA 17.8 kDa class I heat shock p... 92.8 7e-19 gi|41059801|gb|AAR99375.1| small heat shock protein [Prunus pers 92.4 1e-18 gi|1536911|emb|CAA69172.1| 17 kDa class I small heat shock pr... 92.4 1e-18 gi|37704437|gb|AAR01523.1| cytosolic class I small heat shock... 92.4 1e-18 gi|2911276|gb|AAC39360.1| LMW heat shock protein [Fragaria x ana 92.4 1e-18 gi|123538|sp|P04793|HSP13_SOYBN 17.5 kDa class I heat shock p... 92.4 1e-18 gi|115434392|ref|NP_001041954.1| Os01g0136100 [Oryza sativa (... 92.4 1e-18 gi|1122317|emb|CAA63903.1| heat shock protein 17.9 [Pennisetum g 92.0 1e-18 gi|1235896|gb|AAB63310.1| 18.6 kDa heat-shock protein [Helianthu 92.0 1e-18 gi|169101|gb|AAA33671.1| 17.9 kDa heat shock protein (hsp17.9) 92.0 1e-18 gi|123534|sp|P02519|HSP11_SOYBN 17.3 kDa class I heat shock p... 92.0 1e-18 gi|123545|sp|P12810|HSP11_WHEAT 16.9 kDa class I heat shock p... 92.0 1e-18 gi|16930753|gb|AAL32036.1|AF439277_1 small heat shock protein [R 91.7 2e-18 gi|37704445|gb|AAR01527.1| cytosolic class I small heat shock... 91.7 2e-18 gi|87240494|gb|ABD32352.1| Heat shock protein Hsp20 [Medicago tr 91.7 2e-18 gi|4836473|gb|AAD30454.1|AF123257_1 17.6 kD class I small hea... 91.7 2e-18 gi|123555|sp|P19243|HSP11_PEA 18.1 kDa class I heat shock pro... 91.7 2e-18 gi|232272|sp|P30693|HSP11_HELAN 17.6 kDa class I heat shock p... 91.7 2e-18 gi|15218934|ref|NP_176195.1| unknown protein [Arabidopsis tha... 91.7 2e-18 gi|123554|sp|P27879|HSP11_MEDSA 18.1 kDa class I heat shock p... 91.7 2e-18 gi|115434394|ref|NP_001041955.1| Os01g0136200 [Oryza sativa (... 91.7 2e-18 gi|21592809|gb|AAM64758.1| heat shock protein, putative [Arabido 91.3 2e-18 gi|1122315|emb|CAA63901.1| heat shock protein 17.0 [Pennisetum g 91.3 2e-18 gi|25809052|gb|AAN74634.1| heat shock protein [Pisum sativum] 91.3 2e-18 gi|4836469|gb|AAD30452.1|AF123255_1 17.7 kD class I small hea... 91.3 2e-18 gi|445136|prf||1908436B heat shock protein 16.9 91.3 2e-18 gi|4456758|emb|CAB36910.1| heat shock protein 17.4 [Quercus sube 90.9 3e-18 gi|3819743|emb|CAA08908.1| cytosolic class I small heat-shock... 90.9 3e-18 gi|295501|gb|AAA34294.1| heat shock protein 16.9C 90.9 3e-18 gi|8250119|emb|CAB93512.1| HSP17.7-a protein [Brassica oleracea 90.5 4e-18 gi|115452113|ref|NP_001049657.1| Os03g0266300 [Oryza sativa (... 90.5 4e-18 gi|4836471|gb|AAD30453.1|AF123256_1 17.8 kD class I small hea... 90.5 4e-18 gi|4838149|gb|AAD30865.1|AF117885_1 seed maturation protein PM31 90.5 4e-18 gi|115452121|ref|NP_001049661.1| Os03g0267000 [Oryza sativa (... 90.1 5e-18 gi|115434390|ref|NP_001041953.1| Os01g0136000 [Oryza sativa (... 90.1 5e-18 gi|1122313|emb|CAA63902.1| heat shock protein 16.9 [Pennisetum g 89.7 6e-18 gi|2465461|gb|AAB72109.1| low molecular weight heat-shock protei 89.7 6e-18 gi|123544|sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock p... 89.7 6e-18 gi|16340|emb|CAA35182.1| unnamed protein product [Arabidopsis th 89.4 8e-18 gi|75279026|sp|O82011|HSP11_SOLPE 17.7 kDa class I heat shock... 89.4 8e-18 gi|232273|sp|P30221|HSP11_LYCES 17.8 kDa class I heat shock p... 89.4 8e-18 gi|15294150|gb|AAK95252.1|AF410266_1 AT3g46230/F12M12_200 [Ar... 89.0 1e-17 gi|1763972|gb|AAB39856.1| heat shock protein [Oryza sativa] 89.0 1e-17 gi|3582434|dbj|BAA33062.1| low-molecular-weight heat shock prote 89.0 1e-17 gi|15231372|ref|NP_190209.1| ATHSP17.4 [Arabidopsis thaliana]... 89.0 1e-17 gi|25044839|gb|AAM28293.1| class-1 LMW heat shock protein [Anana 88.6 1e-17 gi|83776798|gb|ABC46712.1| 17.5 kDa class I HSP [Arachis hypogae 88.6 1e-17 gi|40646966|gb|AAQ19680.1| chloroplast small heat shock prote... 88.2 2e-17 gi|1213116|emb|CAA63570.1| low molecular weight heat-shock prote 88.2 2e-17 gi|117188222|gb|ABK32539.1| heat shock protein 17.8 [Rosa chinen 87.4 3e-17 gi|37704425|gb|AAR01517.1| cytosolic class I small heat shock... 87.4 3e-17 gi|507209|gb|AAA61632.1| low molecular weight heat-shock protein 87.4 3e-17 gi|15227552|ref|NP_180511.1| unknown protein [Arabidopsis tha... 87.4 3e-17 gi|6969974|gb|AAF34133.1|AF161179_1 low molecular weight heat sh 87.0 4e-17 gi|115452119|ref|NP_001049660.1| Os03g0266900 [Oryza sativa (... 87.0 4e-17 gi|83701135|gb|ABC41131.1| 17.3 kDa class I heat shock protein [ 87.0 4e-17 gi|123540|sp|P04795|HSP15_SOYBN 17.6 kDa class I heat shock p... 87.0 4e-17 gi|8671873|gb|AAF78436.1|AC018748_15 Contains similarity to 1... 86.7 5e-17 gi|15220832|ref|NP_175759.1| unknown protein [Arabidopsis tha... 86.7 5e-17 gi|37704399|gb|AAR01504.1| cytosolic class I small heat shock... 86.3 7e-17 gi|118722670|gb|ABL10073.1| 19.9 kDa class I small heat-shock... 85.9 9e-17 gi|21805|emb|CAA45902.1| heat shock protein 16.9B [Triticum aest 85.9 9e-17 gi|17942916|pdb|1GME|A Chain A, Crystal Structure And Assembl... 85.9 9e-17 gi|1213118|emb|CAA63571.1| low molecular weight heat-shock prote 85.1 2e-16 gi|218251|dbj|BAA02160.1| low molecular weight heat shock pro... 85.1 2e-16 gi|21068486|emb|CAC81964.1| small heat-shock protein [Pseudotsug 84.7 2e-16 gi|37704391|gb|AAR01500.1| cytosolic class I small heat shock... 84.3 3e-16 gi|115452123|ref|NP_001049662.1| Os03g0267200 [Oryza sativa (... 84.3 3e-16 gi|1815662|gb|AAC78393.1| low molecular mass heat shock protein 84.0 3e-16 gi|558606|emb|CAA50022.1| Nthsp18p [Nicotiana tabacum] 83.6 4e-16 gi|37704403|gb|AAR01506.1| cytosolic class I small heat shock... 83.6 4e-16 gi|4185754|gb|AAD09181.1| cytosolic I small heat shock protei... 83.2 6e-16 gi|15238509|ref|NP_200780.1| HSP18.2 (HEAT SHOCK PROTEIN 18.2... 83.2 6e-16 gi|37704419|gb|AAR01514.1| cytosolic class I small heat shock... 82.8 8e-16 gi|5732912|gb|AAD49336.1|AF166277_1 low molecular weight heat-sh 82.8 8e-16 gi|169801|gb|AAB46378.1| LMW heat shock protein [Oryza sativa] 82.8 8e-16 gi|4185748|gb|AAD09178.1| cytosolic I small heat shock protei... 82.8 8e-16 gi|21618106|gb|AAM67156.1| heat shock protein 18 [Arabidopsis th 82.0 1e-15 gi|37704405|gb|AAR01507.1| cytosolic class I small heat shock... 82.0 1e-15 gi|32401095|gb|AAP80744.1| class I heat shock protein [Kandelia 80.9 3e-15 gi|1213073|emb|CAA53286.1| heat shock protein 17.8 [Oryza sat... 79.7 6e-15 gi|21068488|emb|CAC81965.1| small heat-shock protein [Funaria hy 78.6 1e-14
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 273 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 565 Length of database: 101054579 Length adjustment: 107 Effective length of query: 458 Effective length of database: 70736236 Effective search space: 5729635116 Effective search space used: 5729635116 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)