Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168923158-20792-193674913583.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig6 Length=496
Score E Sequences producing significant alignments: (Bits) Value gi|89275331|gb|ABD66069.1| EMZ08 [Elaeis guineensis] 138 1e-32 gi|89275333|gb|ABD66070.1| EM1 [Phoenix dactylifera] 122 5e-28 gi|1754979|gb|AAB39474.1| Em protein 118 9e-27 gi|7594641|emb|CAB88086.1| Early-methionine-labelled polypept... 117 2e-26 gi|1169520|sp|P46517|EMB5_MAIZE Late embryogenesis abundant p... 117 3e-26 gi|1169516|sp|Q08000|EM3_WHEAT Em protein H2 >gi|312517|emb|C... 115 6e-26 gi|1169518|sp|P42755|EM4_WHEAT Em protein H5 >gi|6138910|emb|... 115 6e-26 gi|119313|sp|P04568|EM1_WHEAT Em protein >gi|21733|emb|CAA683... 115 8e-26 gi|547817|sp|Q05190|LE19A_HORVU Late embryogenesis abundant p... 115 1e-25 gi|7594645|emb|CAB88096.1| Early-methionine-labelled polypeptide 115 1e-25 gi|7594647|emb|CAB88087.1| Early-methionine-labelled polypeptide 114 1e-25 gi|1170723|sp|P46532|LE19B_HORVU Late embryogenesis abundant ... 114 1e-25 gi|4007844|emb|CAA65311.1| Em protein [Triticum aestivum] >gi... 114 2e-25 gi|7594654|emb|CAB88090.1| Early-methionine-labelled polypeptide 114 2e-25 gi|77993668|gb|ABB13462.1| Em6 [Medicago truncatula] >gi|9287... 114 2e-25 gi|48596911|dbj|BAD22768.1| embryonic abundant protein [Bromus i 114 2e-25 gi|7594660|emb|CAB88093.1| Early-methionine-labelled polypeptide 114 2e-25 gi|115463347|ref|NP_001055273.1| Os05g0349800 [Oryza sativa (... 114 2e-25 gi|1762955|gb|AAB68027.1| late embryogenesis-abundant protein... 113 3e-25 gi|7594658|emb|CAB88092.1| Early-methionine-labelled polypeptide 113 4e-25 gi|119315|sp|P22701|EM2_WHEAT Em protein CS41 >gi|295844|emb|... 113 4e-25 gi|119316|sp|P17639|EMB1_DAUCA EMB-1 protein >gi|18341|emb|CA... 112 9e-25 gi|7594656|emb|CAB88091.1| Early-methionine-labelled polypeptide 110 3e-24 gi|66735602|gb|AAY54009.1| LEA protein [Arachis hypogaea] 110 3e-24 gi|1141784|gb|AAB07225.1| Em protein [Vigna radiata] 110 3e-24 gi|15225645|ref|NP_181546.1| ATEM6 (ARABIDOPSIS EARLY METHION... 109 6e-24 gi|556805|emb|CAA77508.1| Em protein [Arabidopsis thaliana] 109 6e-24 gi|71040659|gb|AAZ20278.1| lea protein 1 [Arachis hypogaea] 108 1e-23 gi|4007842|emb|CAA65310.1| Em protein [Triticum aestivum] 107 2e-23 gi|18499|emb|CAA38374.1| late embryogenesis abundant protein ... 106 4e-23 gi|126076|sp|P09443|LE19_GOSHI Late embryogenesis abundant pr... 105 6e-23 gi|167381|gb|AAA92729.1| storage protein 105 6e-23 gi|444336|prf||1906384B water stress-related protein 105 8e-23 gi|2494324|sp|Q40864|EML_PICGL Em-like protein >gi|1161169|gb... 103 3e-22 gi|289199|gb|AAA62326.1| late embryogenic abundant protein >g... 102 7e-22 gi|1754977|gb|AAB39473.1| Em protein 102 7e-22 gi|33151040|gb|AAP97398.1| Em protein [Quercus robur] 102 9e-22 gi|28194651|gb|AAO33587.1|AF479305_1 putative lea 1 [Arachis hyp 97.1 3e-20 gi|3641278|gb|AAC36329.1| late embryogenic abundant protein [Vig 96.3 5e-20 gi|112012415|gb|ABH85404.1| late embryogenesis abundant protein 95.9 6e-20 gi|57506544|dbj|BAD86646.1| Em-like protein [Daucus carota] 95.1 1e-19 gi|1141782|gb|AAB07224.1| EM protein [Vigna radiata] 95.1 1e-19 gi|1350538|gb|AAB01568.1| Em-like protein [Picea glauca] 94.0 2e-19 gi|168467|gb|AAA33458.1| late embryogenesis abundant protein ... 92.8 5e-19 gi|547818|sp|Q02400|LE193_HORVU Late embryogenesis abundant p... 92.4 7e-19 gi|48596913|dbj|BAD22769.1| embryonic abundant protein [Bromus i 89.0 8e-18 gi|70608408|gb|AAZ04476.1| group 1 LEA protein [Physcomitrella p 88.6 1e-17 gi|547819|sp|Q05191|LE194_HORVU Late embryogenesis abundant p... 86.7 4e-17 gi|79150625|gb|ABB52062.1| late embryogenesis-abundant protein 1 81.3 2e-15 gi|81022819|gb|ABB55260.1| late embryogenesis-abundant protein [ 80.9 2e-15 gi|3334471|sp|P46514|LE10_HELAN 10 kDa late embryogenesis abu... 80.5 3e-15 gi|282984|pir||S23527 embryonic abundant protein, 10K - common s 79.3 6e-15 gi|15231041|ref|NP_190749.1| ATEM1 [Arabidopsis thaliana] >gi... 78.6 1e-14 gi|79150665|gb|ABB52063.1| late embryogenesis-abundant protein 1 78.2 1e-14 gi|3183627|emb|CAA05711.1| Em protein [Brassica napus] 77.8 2e-14 gi|81022817|gb|ABB55259.1| late embryogenesis-abundant protein [ 76.6 4e-14 gi|81022815|gb|ABB55258.1| late embryogenesis-abundant protein [ 76.3 5e-14 gi|134420|sp|P11573|SEEP_RAPSA Late seed maturation protein P... 73.9 3e-13 gi|115434656|ref|NP_001042086.1| Os01g0159600 [Oryza sativa (... 34.7 0.18 gi|9757686|dbj|BAB08205.1| unnamed protein product [Oryza sat... 33.5 0.39 gi|7671528|emb|CAB89490.1| CRK1 protein [Beta vulgaris subsp.... 33.1 0.51 gi|92889314|gb|ABE89813.1| WRKY DNA -binding domain, putative [M 30.0 4.3 gi|50251784|dbj|BAD27716.1| hypothetical protein [Oryza sativa ( 30.0 4.3 gi|54291168|dbj|BAD61840.1| hypothetical protein [Oryza sativ... 29.6 5.7 gi|42407780|dbj|BAD08925.1| hypothetical protein [Oryza sativa ( 29.6 5.7 gi|34394967|dbj|BAC84516.1| Epstein-Barr virus EBNA-1-like pr... 29.6 5.7 gi|115447875|ref|NP_001047717.1| Os02g0674700 [Oryza sativa (... 29.3 7.4 gi|92876973|gb|ABE84238.1| Rhomboid-like protein [Medicago trunc 29.3 7.4 gi|115464327|ref|NP_001055763.1| Os05g0461600 [Oryza sativa (... 29.3 7.4 gi|14589380|gb|AAK70635.1|AC091238_13 Putative polyprotein [O... 29.3 7.4 gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Or... 29.3 7.4 gi|18418457|ref|NP_568358.1| unknown protein [Arabidopsis tha... 29.3 7.4 gi|116059596|emb|CAL55303.1| Glycosylphosphatidylinositol anc... 28.9 9.7 gi|92896299|gb|ABE93136.1| 50s ribosomal protein cl25, chloro... 28.9 9.7 gi|92886933|gb|ABE88539.1| RNA-directed DNA polymerase (Rever... 28.9 9.7 gi|92869805|gb|ABE79295.1| RNA-directed DNA polymerase (Rever... 28.9 9.7 gi|32490155|emb|CAE05142.1| OSJNBa0065H10.14 [Oryza sativa (japo 28.9 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 338 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 496 Length of database: 101054579 Length adjustment: 105 Effective length of query: 391 Effective length of database: 71302934 Effective search space: 4278176040 Effective search space used: 4278176040 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)