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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168857218-29170-12970391233.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,457,254 sequences; 1,532,736,548 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig21
Length=415

Distribution of 6 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|102139747|gb|ABF69954.1|  paxneb-related protein [Musa acumina   125    6e-29
gi|115469124|ref|NP_001058161.1|  Os06g0639600 [Oryza sativa (...   117    2e-26 Gene info
gi|66841022|emb|CAI79646.1|  elongator component [Arabidopsis tha   102    6e-22 UniGene info
gi|17063185|gb|AAL32987.1|  AT3g11220/F11B9_116 [Arabidopsis t...   100    1e-21 UniGene info
gi|42564060|ref|NP_566388.2|  unknown protein [Arabidopsis tha...   100    1e-21 UniGene infoGene info
gi|116054820|emb|CAL56897.1|  RNA polymerase II elongator comp...  31.6    0.93
Alignments

>gi|102139747|gb|ABF69954.1|  paxneb-related protein [Musa acuminata]
Length=291

 Score =  125 bits (313),  Expect = 6e-29
 Identities = 59/66 (89%), Positives = 64/66 (96%), Gaps = 0/66 (0%)
 Frame = +1

Query  217  FVSSGIPDLDKILGGGFLLGSVVMVMEDADAPHHLLLLRNFMSQGIVHRQPLLFASPAKD  396
            FVSSGIPDLD+ILGGGFLLGS+VMVMEDADAPHHLLLLRNFMSQG+VHRQP+LFASP +D
Sbjct  48   FVSSGIPDLDRILGGGFLLGSLVMVMEDADAPHHLLLLRNFMSQGVVHRQPVLFASPLRD  107

Query  397  PRAXLG  414
            PRA LG
Sbjct  108  PRAFLG  113


>gi|115469124|ref|NP_001058161.1| Gene info Os06g0639600 [Oryza sativa (japonica cultivar-group)]
 gi|51535593|dbj|BAD37537.1| Gene info Paxneb protein-like [Oryza sativa (japonica cultivar-group)]
 gi|51536358|dbj|BAD37489.1| Gene info Paxneb protein-like [Oryza sativa (japonica cultivar-group)]
 gi|113596201|dbj|BAF20075.1| Gene info Os06g0639600 [Oryza sativa (japonica cultivar-group)]
Length=377

 Score =  117 bits (292),  Expect = 2e-26
 Identities = 53/66 (80%), Positives = 62/66 (93%), Gaps = 0/66 (0%)
 Frame = +1

Query  217  FVSSGIPDLDKILGGGFLLGSVVMVMEDADAPHHLLLLRNFMSQGIVHRQPLLFASPAKD  396
            FVSSGIPDLD+ILGGGFL+GSVVM+MED+DAPHHLLLLR+FM+QG+VH+QPLLFA P K+
Sbjct  41   FVSSGIPDLDRILGGGFLIGSVVMIMEDSDAPHHLLLLRSFMAQGVVHKQPLLFAGPMKE  100

Query  397  PRAXLG  414
            PR  LG
Sbjct  101  PRLFLG  106


>gi|66841022|emb|CAI79646.1| UniGene info elongator component [Arabidopsis thaliana]
Length=355

 Score =  102 bits (253),  Expect = 6e-22
 Identities = 47/66 (71%), Positives = 58/66 (87%), Gaps = 0/66 (0%)
 Frame = +1

Query  217  FVSSGIPDLDKILGGGFLLGSVVMVMEDADAPHHLLLLRNFMSQGIVHRQPLLFASPAKD  396
            F+SSGI DLD+ILGGG+ LGS+VMVMED +APHH+ LLR FMSQG+V+ QPLL+ASP+KD
Sbjct  36   FISSGIRDLDRILGGGYPLGSLVMVMEDPEAPHHMDLLRTFMSQGLVNNQPLLYASPSKD  95

Query  397  PRAXLG  414
            P+  LG
Sbjct  96   PKGFLG  101


>gi|17063185|gb|AAL32987.1| UniGene info AT3g11220/F11B9_116 [Arabidopsis thaliana]
 gi|33589728|gb|AAQ22630.1| UniGene info At3g11220/F11B9_116 [Arabidopsis thaliana]
Length=243

 Score =  100 bits (250),  Expect = 1e-21
 Identities = 46/66 (69%), Positives = 58/66 (87%), Gaps = 0/66 (0%)
 Frame = +1

Query  217  FVSSGIPDLDKILGGGFLLGSVVMVMEDADAPHHLLLLRNFMSQGIVHRQPLLFASPAKD  396
            F+SSGI DLD+ILGGG+ LGS+VMVMED +APHH+ LLR +MSQG+V+ QPLL+ASP+KD
Sbjct  36   FISSGIRDLDRILGGGYPLGSLVMVMEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKD  95

Query  397  PRAXLG  414
            P+  LG
Sbjct  96   PKGFLG  101


>gi|42564060|ref|NP_566388.2| UniGene infoGene info unknown protein [Arabidopsis thaliana]
 gi|12321866|gb|AAG50962.1|AC073395_4 Gene info hypothetical protein; 53156-50996 [Arabidopsis thaliana]
Length=355

 Score =  100 bits (250),  Expect = 1e-21
 Identities = 46/66 (69%), Positives = 58/66 (87%), Gaps = 0/66 (0%)
 Frame = +1

Query  217  FVSSGIPDLDKILGGGFLLGSVVMVMEDADAPHHLLLLRNFMSQGIVHRQPLLFASPAKD  396
            F+SSGI DLD+ILGGG+ LGS+VMVMED +APHH+ LLR +MSQG+V+ QPLL+ASP+KD
Sbjct  36   FISSGIRDLDRILGGGYPLGSLVMVMEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKD  95

Query  397  PRAXLG  414
            P+  LG
Sbjct  96   PKGFLG  101


>gi|116054820|emb|CAL56897.1|  RNA polymerase II elongator complex, subunit ELP4 (ISS) [Ostreococcus 
tauri]
Length=392

 Score = 31.6 bits (70),  Expect = 0.93
 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 0/27 (0%)
 Frame = +1

Query  220  VSSGIPDLDKILGGGFLLGSVVMVMED  300
            VSSG  D+D +LGGGF LG V  V  D
Sbjct  46   VSSGHGDVDAMLGGGFALGGVAHVGGD  72







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 11, 2007  5:57 PM
  Number of letters in database: 101,016,998
  Number of sequences in database:  283,237
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283237
Number of Hits to DB: 246
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 415
Length of database: 101016998
Length adjustment: 101
Effective length of query: 314
Effective length of database: 72410061
Effective search space: 2679172257
Effective search space used: 2679172257
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)