RID=1168857454-25718-85430321336.BLASTQ1, Contig28

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168857454-25718-85430321336.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters

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Score E Sequences producing significant alignments: (Bits) Value gi|22497282|gb|AAL65604.1| RFL1 [Arabidopsis thaliana] >gi|22... 28.5 7.4 gi|22497291|gb|AAL65610.1| RFL1 [Arabidopsis thaliana] >gi|22... 28.5 7.4 gi|22497298|gb|AAL65614.1| RFL1 [Arabidopsis thaliana] 28.5 7.4 gi|15221250|ref|NP_172685.1| RFL1 (RPS5-LIKE 1); ATP binding ... 28.5 7.4

Alignments

 

>gi|22497282|gb|AAL65604.1|  RFL1 [Arabidopsis thaliana]
 gi|22497309|gb|AAL65621.1|  RFL1 [Arabidopsis thaliana]
Length=885

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
 Frame = +3

Query  42   LDGLLLCRQPAASHALRKVM*LQYLTGQKLI*ASAPSYLSSFRT  173
            L G  + R P   H LRK++ L+    ++L   S  SYLSS RT
Sbjct  594  LSGTYIERLPHGLHELRKLVHLKLERTRRLESISGISYLSSLRT  637


>gi|22497291|gb|AAL65610.1|  RFL1 [Arabidopsis thaliana]
 gi|22497301|gb|AAL65616.1|  RFL1 [Arabidopsis thaliana]
Length=885

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
 Frame = +3

Query  42   LDGLLLCRQPAASHALRKVM*LQYLTGQKLI*ASAPSYLSSFRT  173
            L G  + R P   H LRK++ L+    ++L   S  SYLSS RT
Sbjct  594  LSGTYIERLPHGLHELRKLVHLKLERTRRLESISGISYLSSLRT  637


>gi|22497298|gb|AAL65614.1|  RFL1 [Arabidopsis thaliana]
Length=885

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
 Frame = +3

Query  42   LDGLLLCRQPAASHALRKVM*LQYLTGQKLI*ASAPSYLSSFRT  173
            L G  + R P   H LRK++ L+    ++L   S  SYLSS RT
Sbjct  594  LSGTYIERLPHGLHELRKLVHLKLERTRRLESISGISYLSSLRT  637


>gi|15221250|ref|NP_172685.1|  RFL1 (RPS5-LIKE 1); ATP binding [Arabidopsis thaliana]
 gi|46396936|sp|Q8L3R3|RFL1_ARATH  Disease resistance protein RFL1 (RPS5-like protein 1) (pNd13/pNd14)
 gi|10086513|gb|AAG12573.1|AC022522_6  NBS/LRR disease resistance protein [Arabidopsis thaliana]
 gi|3309619|gb|AAC26125.1|  NBS/LRR disease resistance protein [Arabidopsis thaliana]
Length=885

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
 Frame = +3

Query  42   LDGLLLCRQPAASHALRKVM*LQYLTGQKLI*ASAPSYLSSFRT  173
            L G  + R P   H LRK++ L+    ++L   S  SYLSS RT
Sbjct  594  LSGTYIERLPHGLHELRKLVHLKLERTRRLESISGISYLSSLRT  637

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 114 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 201 Length of database: 101016998 Length adjustment: 39 Effective length of query: 162 Effective length of database: 89970755 Effective search space: 2519181140 Effective search space used: 2519181140 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)

Distribution of 4 Blast Hits on the Query Sequence