Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168857701-8265-22255367841.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig31 Length=534
Score E Sequences producing significant alignments: (Bits) Value gi|48527431|gb|AAT45847.1| elongation factor 1-alpha 1 [Elaeis g 293 3e-79 gi|61741088|gb|AAX54511.1| elongation factor 1 alpha [Actinidia 293 3e-79 gi|8778823|gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thalian 293 3e-79 gi|74486740|gb|ABA12223.1| translation elongation factor 1A-7 [G 293 3e-79 gi|74486728|gb|ABA12217.1| translation elongation factor 1A-1 [G 293 3e-79 gi|74486736|gb|ABA12221.1| translation elongation factor 1A-5 [G 293 3e-79 gi|74486742|gb|ABA12224.1| translation elongation factor 1A-8 [G 293 3e-79 gi|74486734|gb|ABA12220.1| translation elongation factor 1A-4 [G 293 3e-79 gi|74486744|gb|ABA12225.1| translation elongation factor 1A-9 [G 293 3e-79 gi|74486732|gb|ABA12219.1| translation elongation factor 1A-3 [G 293 3e-79 gi|3869088|dbj|BAA34348.1| elongation factor-1 alpha [Nicotiana 293 3e-79 gi|6015058|sp|O49169|EF1A_MANES Elongation factor 1-alpha (EF... 293 3e-79 gi|5917745|gb|AAD56019.1|AF181491_1 elongation factor-1 alpha 2 293 3e-79 gi|24371055|dbj|BAC22125.1| eukaryotic elongation factor 1A [Bru 293 3e-79 gi|4680249|gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1; 292 6e-79 gi|108706480|gb|ABF94275.1| Elongation factor 1-alpha, putati... 291 7e-79 gi|5917747|gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 291 7e-79 gi|2996096|gb|AAC15413.1| translation elongation factor-1 alp... 291 7e-79 gi|2282584|gb|AAB64207.1| elongation factor 1-alpha [Zea mays] 291 7e-79 gi|74486730|gb|ABA12218.1| translation elongation factor 1A-2 [G 291 7e-79 gi|115451089|ref|NP_001049145.1| Os03g0177400 [Oryza sativa (... 291 7e-79 gi|3122071|sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha (EF... 291 7e-79 gi|399414|sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha (EF-... 291 7e-79 gi|3122060|sp|O24534|EF1A_VICFA Elongation factor 1-alpha (EF... 291 7e-79 gi|2662343|dbj|BAA23658.1| EF-1 alpha [Oryza sativa] 291 7e-79 gi|23397097|gb|AAN31833.1| putative translation elongation fa... 291 1e-78 gi|18086389|gb|AAL57653.1| At1g07930/T6D22_3 [Arabidopsis thalia 291 1e-78 gi|17064954|gb|AAL32631.1| putative elongation factor 1-a [Ar... 291 1e-78 gi|79331520|ref|NP_001032107.1| calmodulin binding / translat... 291 1e-78 gi|74486738|gb|ABA12222.1| translation elongation factor 1A-6 [G 291 1e-78 gi|1864017|dbj|BAA09709.1| elongation factor-1 alpha [Nicotiana 291 1e-78 gi|1169476|sp|P43643|EF1A_TOBAC Elongation factor 1-alpha (EF... 291 1e-78 gi|15239308|ref|NP_200847.1| calmodulin binding / translation... 291 1e-78 gi|40217939|gb|AAR82894.1| elongation factor 1-alpha [Cichorium 291 1e-78 gi|18419676|gb|AAL69396.1| elongation factor 1-alpha [Elaeis ole 291 1e-78 gi|9802384|gb|AAF99703.1| elongation factor [Saccharum officinar 291 1e-78 gi|7230391|gb|AAF42979.1| elongation factor 1 alpha [Zea mays] 291 1e-78 gi|26324158|gb|AAN77897.1| elongation factor 1 alpha [Stevia reb 291 1e-78 gi|7230395|gb|AAF42981.1| elongation factor 1 alpha [Zea mays] 291 1e-78 gi|7230387|gb|AAF42977.1| elongation factor 1 alpha [Zea mays] 291 1e-78 gi|7230385|gb|AAF42976.1| elongation factor 1 alpha [Zea mays] 291 1e-78 gi|83283977|gb|ABC01896.1| elongation factor 1-alpha-like protei 291 1e-78 gi|82621190|gb|ABB86283.1| elongation factor-1 alpha-like [Solan 291 1e-78 gi|82400148|gb|ABB72813.1| elongation factor 1-alpha-like protei 291 1e-78 gi|81076159|gb|ABB55388.1| elongation factor 1-alpha-like [Solan 291 1e-78 gi|77999261|gb|ABB16977.1| elongation factor 1-alpha-like protei 291 1e-78 gi|119150|sp|P17786|EF1A_LYCES Elongation factor 1-alpha (EF-... 291 1e-78 gi|461987|sp|P34823|EF1A2_DAUCA Elongation factor 1-alpha (EF... 291 1e-78 gi|24745945|dbj|BAC23049.1| Elongation factor 1-alpha [Solanum t 291 1e-78 gi|66775524|gb|AAY56337.1| elongation factor-1 alpha [Musa acumi 290 2e-78 gi|295789|emb|CAA34456.1| elongation factor 1-alpha [Arabidopsis 290 2e-78 gi|13605682|gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabi... 290 2e-78 gi|1352345|sp|P25698|EF1A_SOYBN Elongation factor 1-alpha (EF... 290 2e-78 gi|89276321|gb|ABD66517.1| EF-1 alpha [Gymnadenia conopsea] 290 3e-78 gi|4138179|emb|CAA11705.1| elongation factor 1 alpha subunit [Ma 290 3e-78 gi|13430510|gb|AAK25877.1|AF360167_1 putative translation elo... 290 3e-78 gi|7230397|gb|AAF42982.1| elongation factor 1 alpha [Zea mays] 290 3e-78 gi|232029|sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha (EF... 289 4e-78 gi|29243204|dbj|BAC66180.1| elongation factor 1A [Avicennia mari 289 5e-78 gi|110741201|dbj|BAF02151.1| elongation factor 1-alpha [Arabidop 288 6e-78 gi|24371059|dbj|BAC22127.1| eukaryotic elongation factor 1A [Sal 288 1e-77 gi|18873725|gb|AAL79774.1|AF331849_1 elongation factor 1 alpha [ 287 2e-77 gi|108706481|gb|ABF94276.1| Elongation factor 1-alpha, putati... 286 2e-77 gi|24371057|dbj|BAC22126.1| eukaryotic elongation factor 1A [Sua 285 5e-77 gi|15081765|gb|AAK82537.1| At1g07930/T6D22_3 [Arabidopsis thalia 285 7e-77 gi|6015054|sp|Q40034|EF1A2_HORVU Elongation factor 1-alpha (E... 285 7e-77 gi|7230393|gb|AAF42980.1| elongation factor 1 alpha [Zea mays] 284 1e-76 gi|461988|sp|P34824|EF1A1_HORVU Elongation factor 1-alpha (EF-1- 283 3e-76 gi|18873727|gb|AAL79775.1| elongation factor 1 alpha [Saccharum 281 8e-76 gi|12580861|emb|CAC27139.1| translation elongation factor-1 alph 281 1e-75 gi|3122053|sp|Q41011|EF1A_PEA Elongation factor 1-alpha (EF-1... 275 7e-74 gi|33347397|gb|AAQ15281.1| elongation factor 1 alpha [Pyrus pyri 275 9e-74 gi|1673426|emb|CAA68246.1| factor 1-alpha [Forsythia x intermedi 274 1e-73 gi|1669668|emb|CAA65798.1| EF1-alpha [Forsythia x intermedia] 274 1e-73 gi|33347395|gb|AAQ15280.1| elongation factor 1 alpha [Pyrus pyri 273 3e-73 gi|40748293|gb|AAR89627.1| elongation factor 1 alpha [Citrus sin 273 4e-73 gi|85717894|gb|ABC74971.1| elongation factor 1 alpha [Malus x do 272 5e-73 gi|56112439|gb|AAV71174.1| elongation factor 1-alpha [Lotus corn 271 1e-72 gi|7230389|gb|AAF42978.1| elongation factor 1 alpha [Zea mays] 271 1e-72 gi|77999299|gb|ABB16996.1| elongation factor 1-alpha-like protei 270 3e-72 gi|90823336|gb|ABE01138.1| elongation factor 1-alpha [Daucus car 262 5e-70 gi|62362578|gb|AAX81595.1| elongation factor elF1-alpha [Populus 260 2e-69 gi|4586588|dbj|BAA76426.1| translation elongation factor [Cicer 258 1e-68 gi|29892963|emb|CAD60652.1| elongation factor [Solanum tuberosum 252 5e-67 gi|4731316|gb|AAD28440.1| elongation factor 1-alpha [Nicotiana t 239 4e-63 gi|27414140|gb|AAO12048.1| elongation factor 1-alpha [Poncirus t 238 7e-63 gi|7542600|gb|AAF63516.1|AF242732_1 translation elongation facto 214 1e-55 gi|77745446|gb|ABB02622.1| elongation factor 1-alpha-like protei 198 8e-51 gi|77999257|gb|ABB16975.1| elongation factor 1-alpha-like protei 197 1e-50 gi|29419231|gb|AAO61852.1| translation elongation factor-1 alpha 187 1e-47 gi|115345316|dbj|BAF33334.1| elongation factor 1 alpha [Capsicum 177 3e-44 gi|119721291|gb|ABL98118.1| elongation factor 1-alpha [Euphorbia 176 6e-44 gi|37783255|gb|AAP04393.1| translation elongation factor 1 alpha 166 5e-41 gi|92873453|gb|ABE81895.1| Protein synthesis factor, GTP-binding 156 4e-38 gi|92895648|gb|ABE92795.1| Zinc finger, RanBP2-type; AAA ATPa... 153 3e-37 gi|116061178|emb|CAL56566.1| Mitochondrial translation elonga... 150 3e-36 gi|116061031|emb|CAL56419.1| Mitochondrial translation elonga... 150 3e-36 gi|54399516|gb|AAV34148.1| EF-1 alpha-like protein [Helicospo... 149 6e-36 gi|115434174|ref|NP_001041845.1| Os01g0116600 [Oryza sativa (... 148 1e-35 gi|53791458|dbj|BAD52510.1| putative translation elongation f... 148 1e-35
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 357 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 534 Length of database: 101016998 Length adjustment: 106 Effective length of query: 428 Effective length of database: 70993876 Effective search space: 5111559072 Effective search space used: 5111559072 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)