RID=1168857730-32619-96352866513.BLASTQ4, Contig33

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168857730-32619-96352866513.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters

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Score E Sequences producing significant alignments: (Bits) Value gi|115438604|ref|NP_001043582.1| Os01g0617500 [Oryza sativa (... 42.7 8e-04

gi|54290420|dbj|BAD61290.1| acetyltransferase 1-like [Oryza s... 42.7 8e-04 gi|47934119|gb|AAT39542.1| transcription factor DRE-binding f... 30.8 3.1

Alignments

 

>gi|115438604|ref|NP_001043582.1|  Os01g0617500 [Oryza sativa (japonica cultivar-group)]
 gi|54290419|dbj|BAD61289.1|  acetyltransferase 1-like [Oryza sativa (japonica cultivar-group)]
 gi|113533113|dbj|BAF05496.1|  Os01g0617500 [Oryza sativa (japonica cultivar-group)]
Length=909

 Score = 42.7 bits (99),  Expect = 8e-04
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = -3

Query  530  ARXXXXFPYSTYFXXCRXXAVAY-SVNDNVQNAPENGVXXYQEAKNEDSH--SLNGKLHA  360
            AR    FPYSTYF   +  + AY SV ++++++ ENG+    + K+ D    +LNG +H 
Sbjct  840  ARCAEYFPYSTYFEGIKSASAAYCSVANSLEDSSENGIVANAQMKSADGETCTLNGTVHI  899

Query  359  FKDLT  345
              +L+
Sbjct  900  VDELS  904


>gi|54290420|dbj|BAD61290.1|  acetyltransferase 1-like [Oryza sativa (japonica cultivar-group)]
Length=322

 Score = 42.7 bits (99),  Expect = 8e-04
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = -3

Query  530  ARXXXXFPYSTYFXXCRXXAVAY-SVNDNVQNAPENGVXXYQEAKNEDSH--SLNGKLHA  360
            AR    FPYSTYF   +  + AY SV ++++++ ENG+    + K+ D    +LNG +H 
Sbjct  253  ARCAEYFPYSTYFEGIKSASAAYCSVANSLEDSSENGIVANAQMKSADGETCTLNGTVHI  312

Query  359  FKDLT  345
              +L+
Sbjct  313  VDELS  317


>gi|47934119|gb|AAT39542.1|  transcription factor DRE-binding factor 2 [Gossypium hirsutum]
 gi|71800653|gb|AAZ41376.1|  dehydration responsive element-binding protein 2 [Gossypium hirsutum]
Length=350

 Score = 30.8 bits (68),  Expect = 3.1
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
 Frame = +2

Query  212  PFPFPSDSLPCAQQDSTGATLAV  280
            P+P P DS+ C QQ  TG+T+ +
Sbjct  74   PYPTPMDSVSCPQQPQTGSTIGL  96

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 319 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 538 Length of database: 101016998 Length adjustment: 106 Effective length of query: 432 Effective length of database: 70993876 Effective search space: 5182552948 Effective search space used: 5182552948 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)

Distribution of 3 Blast Hits on the Query Sequence