Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168858168-12501-31739633491.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig41 Length=234
Score E Sequences producing significant alignments: (Bits) Value gi|971280|dbj|BAA09947.1| RAB24 protein [Oryza sativa (japonica 98.6 6e-21 gi|115473617|ref|NP_001060407.1| Os07g0638300 [Oryza sativa (... 97.4 1e-20 gi|6466096|gb|AAF12782.1|AF191099_1 1-Cys peroxiredoxin [Fagopyr 97.1 2e-20 gi|115473619|ref|NP_001060408.1| Os07g0638400 [Oryza sativa (... 96.7 2e-20 gi|34539782|gb|AAQ74769.1| 1-Cys-peroxiredoxine [Triticum aestiv 96.3 3e-20 gi|12247762|gb|AAG50024.1|AF327046_1 1-Cys peroxiredoxin [Tritic 96.3 3e-20 gi|1710077|sp|P52572|REHY_HORVU Probable peroxiredoxin (Thior... 96.3 3e-20 gi|19423862|gb|AAL88710.1|AF484696_1 1-cys peroxiredoxin [Xeroph 92.4 4e-19 gi|49618728|gb|AAT67997.1| 1-cys peroxiredoxin [Medicago truncat 89.7 3e-18 gi|28393058|gb|AAO41963.1| putative peroxiredoxin [Arabidopsi... 87.8 1e-17 gi|15221082|ref|NP_175247.1| ATPER1; antioxidant [Arabidopsis... 87.8 1e-17 gi|7381260|gb|AAF61460.1|AF139817_1 peroxiredoxin antioxidant [B 85.9 4e-17 gi|25990368|gb|AAN76502.1|AF320690_1 1-cys-peroxiredoxin [Brassi 77.4 1e-14 gi|1710079|sp|P52574|REHY_TORRU Probable peroxiredoxin (Thior... 75.9 4e-14 gi|1710076|sp|P52571|REHY_BROSE Probable peroxiredoxin (Thior... 68.2 8e-12 gi|109631664|gb|ABG36006.1| glutathione peroxidase [Helianthu... 57.8 1e-08 gi|109631652|gb|ABG36000.1| glutathione peroxidase [Helianthu... 57.4 1e-08 gi|109631628|gb|ABG35988.1| glutathione peroxidase [Helianthu... 57.4 1e-08 gi|109631696|gb|ABG36022.1| glutathione peroxidase [Helianthus a 57.4 1e-08 gi|109631700|gb|ABG36024.1| glutathione peroxidase [Helianthu... 57.4 1e-08 gi|109631672|gb|ABG36010.1| glutathione peroxidase [Helianthu... 57.4 1e-08 gi|109631620|gb|ABG35984.1| glutathione peroxidase [Helianthu... 57.4 1e-08 gi|109631616|gb|ABG35982.1| glutathione peroxidase [Helianthu... 57.4 1e-08 gi|109631668|gb|ABG36008.1| glutathione peroxidase [Helianthu... 56.6 3e-08 gi|109631596|gb|ABG35972.1| glutathione peroxidase [Helianthu... 56.6 3e-08 gi|109631592|gb|ABG35970.1| glutathione peroxidase [Helianthu... 56.2 3e-08 gi|109631584|gb|ABG35966.1| glutathione peroxidase [Helianthu... 56.2 3e-08 gi|109631590|gb|ABG35969.1| glutathione peroxidase [Helianthus a 56.2 3e-08 gi|109631600|gb|ABG35974.1| glutathione peroxidase [Helianthu... 56.2 3e-08 gi|109631648|gb|ABG35998.1| glutathione peroxidase [Helianthu... 55.8 4e-08 gi|7339568|emb|CAB82860.1| 2-Cys-peroxiredoxin [Riccia fluitans] 36.2 0.036 gi|3328221|gb|AAC78473.1| thioredoxin peroxidase [Secale cereale 36.2 0.036 gi|2829687|sp|P80602|BAS1_WHEAT 2-cys peroxiredoxin BAS1, chl... 36.2 0.036 gi|2499477|sp|Q96468|BAS1_HORVU 2-cys peroxiredoxin BAS1, chl... 36.2 0.036 gi|1076722|pir||S49173 hypothetical protein - barley (fragment) 36.2 0.036 gi|11558242|emb|CAC17803.1| peroxiredoxin [Phaseolus vulgaris... 35.0 0.080 gi|115446541|ref|NP_001047050.1| Os02g0537700 [Oryza sativa (... 35.0 0.080 gi|21553667|gb|AAM62760.1| 2-cys peroxiredoxin-like protein [Ara 34.7 0.10 gi|13265490|gb|AAG40040.2|AF324689_1 AT5g06290 [Arabidopsis thal 34.7 0.10 gi|18415155|ref|NP_568166.1| antioxidant [Arabidopsis thalian... 34.7 0.10 gi|11119229|gb|AAG30570.1|AF311863_1 2-Cys peroxiredoxin [Brassi 34.7 0.10 gi|9758409|dbj|BAB08951.1| 2-cys peroxiredoxin-like protein [Ara 34.7 0.10 gi|21592588|gb|AAM64537.1| putative 2-cys peroxiredoxin BAS1 ... 34.3 0.14 gi|3121825|sp|O24364|BAS1_SPIOL 2-cys peroxiredoxin BAS1, chl... 34.3 0.14 gi|15229806|ref|NP_187769.1| antioxidant [Arabidopsis thalian... 34.3 0.14 gi|21912927|emb|CAC84143.2| thioredoxin peroxidase [Nicotiana ta 32.7 0.39 gi|15131688|emb|CAC48323.1| 2-Cys peroxiredoxin [Pisum sativum] 32.7 0.39 gi|47027073|gb|AAT08751.1| 2-cys peroxiredoxin-like protein [Hya 31.6 0.88 gi|1498198|emb|CAA63909.1| 2-Cys peroxiredoxin bas1 [Arabidop... 31.6 0.88 gi|55168344|gb|AAV44209.1| unknow protein [Oryza sativa (japonic 30.4 2.0 gi|6002472|gb|AAF00001.1|AF052202_1 2Cys-peroxiredoxin precursor 30.0 2.6 gi|87240449|gb|ABD32307.1| DNA-binding protein-like - Arabido... 29.3 4.4 gi|6899842|dbj|BAA90524.1| peroxiredoxin Q [Sedum lineare] 29.3 4.4 gi|15230982|ref|NP_189235.1| antioxidant [Arabidopsis thalian... 29.3 4.4 gi|11034685|dbj|BAB17187.1| hypothetical protein [Oryza sativa ( 28.9 5.7 gi|77552867|gb|ABA95663.1| retrotransposon protein, putative,... 28.1 9.7 gi|62701653|gb|AAX92726.1| Dcp1-like decapping family, putati... 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 155 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 234 Length of database: 101016998 Length adjustment: 49 Effective length of query: 185 Effective length of database: 87138385 Effective search space: 2527013165 Effective search space used: 2527013165 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)