Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168858199-14032-119054157039.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig43 Length=485
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|94442912|emb|CAJ91132.1| ketol-acid reductoisomerase [Platanu 154 2e-37 gi|92874663|gb|ABE82897.1| Acetohydroxy acid isomeroreductase [M 148 1e-35 gi|6225542|sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, ch... 147 2e-35 gi|6491802|emb|CAB61890.1| acetohydroxy acid isomeroreductase [P 144 1e-34 gi|115438917|ref|NP_001043738.1| Os01g0652600 [Oryza sativa (... 144 1e-34 gi|288063|emb|CAA48253.1| ketol-acid reductoisomerase [Arabidops 144 2e-34 gi|15231092|ref|NP_191420.1| ketol-acid reductoisomerase [Ara... 144 2e-34 gi|266346|sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, c... 144 2e-34 gi|115465569|ref|NP_001056384.1| Os05g0573700 [Oryza sativa (... 143 3e-34 gi|2554835|pdb|1YVE|I Chain I, Acetohydroxy Acid Isomeroreduc... 141 1e-33 gi|55792540|gb|AAV65366.1| plastid ketol-acid reductoisomerase [ 110 2e-24 gi|116056611|emb|CAL52900.1| unnamed protein product [Ostreococc 107 2e-23 gi|46092506|dbj|BAD14373.1| hypothetical protein [Solanum melong 104 2e-22 gi|115444261|ref|NP_001045910.1| Os02g0151600 [Oryza sativa (... 87.0 3e-17 gi|31432367|gb|AAP54010.1| expressed protein [Oryza sativa (japo 77.8 2e-14 gi|51535976|dbj|BAD38057.1| ketol-acid reductoisomerase-like ... 77.0 3e-14 gi|115479331|ref|NP_001063259.1| Os09g0436500 [Oryza sativa (... 70.9 2e-12 gi|115435112|ref|NP_001042314.1| Os01g0200100 [Oryza sativa (... 55.5 9e-08 gi|115443743|ref|NP_001045651.1| Os02g0110600 [Oryza sativa (... 31.6 1.4 gi|115460628|ref|NP_001053914.1| Os04g0621700 [Oryza sativa (... 30.8 2.4 gi|38345705|emb|CAD41828.2| OSJNBb0085C12.7 [Oryza sativa (japon 30.8 2.4 gi|551483|gb|AAA21866.1| ABA- and ripening-inducible-like protei 30.8 2.4 gi|115461140|ref|NP_001054170.1| Os04g0664500 [Oryza sativa (... 30.4 3.2 gi|15451574|gb|AAK98698.1|AC069158_10 Putative GATA-1 zinc finge 30.4 3.2 gi|115469898|ref|NP_001058548.1| Os06g0711000 [Oryza sativa (... 30.4 3.2 gi|47848517|dbj|BAD22370.1| hypothetical protein [Oryza sativ... 30.4 3.2 gi|49387745|dbj|BAD26233.1| hypothetical protein [Oryza sativ... 30.0 4.1 gi|116058122|emb|CAL53311.1| Helicase-like transcription fact... 29.6 5.4 gi|115439505|ref|NP_001044032.1| Os01g0709100 [Oryza sativa (... 29.6 5.4 gi|108710081|gb|ABF97876.1| retrotransposon protein, putative... 29.6 5.4 gi|2507621|gb|AAC80575.1| PrMC2 [Pinus radiata] 29.6 5.4 gi|55297618|dbj|BAD68993.1| pr1-like protein [Oryza sativa (japo 29.6 5.4 gi|115469302|ref|NP_001058250.1| Os06g0655500 [Oryza sativa (... 29.6 5.4 gi|115468230|ref|NP_001057714.1| Os06g0504100 [Oryza sativa (... 29.3 7.0 gi|108709270|gb|ABF97065.1| retrotransposon protein, putative... 29.3 7.0 gi|14018085|gb|AAK52148.1|AC084831_2 putative gag-pol polyprotei 29.3 7.0 gi|22267587|gb|AAM94922.1| putative methionine aminopeptidase... 29.3 7.0 gi|78708891|gb|ABB47866.1| methionine aminopeptidase 1, putat... 29.3 7.0 gi|115482858|ref|NP_001065022.1| Os10g0508400 [Oryza sativa (... 29.3 7.0 gi|50509646|dbj|BAD31489.1| hypothetical protein [Oryza sativa ( 29.3 7.0 gi|115436052|ref|NP_001042784.1| Os01g0289600 [Oryza sativa (... 28.9 9.2 gi|23476265|gb|AAN28308.1| starch synthase II [Aegilops tauschii 28.9 9.2 gi|8467950|dbj|BAA96574.1| WRKY transcription factor 6 -like ... 28.9 9.2 gi|115467856|ref|NP_001057527.1| Os06g0326000 [Oryza sativa (... 28.9 9.2 gi|7529653|emb|CAB86618.1| starch synthase IIa-1 [Triticum aesti 28.9 9.2 gi|82943648|dbj|BAE48800.1| starch synthase II-D [Triticum aesti 28.9 9.2
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 301 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 485 Length of database: 101016998 Length adjustment: 104 Effective length of query: 381 Effective length of database: 71560350 Effective search space: 4078939950 Effective search space used: 4078939950 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)