Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168858608-9300-101155964737.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig48 Length=486
Score E Sequences producing significant alignments: (Bits) Value gi|48527433|gb|AAT45848.1| actine [Elaeis guineensis] 274 1e-73 gi|115489824|ref|NP_001067399.1| Os12g0641000 [Oryza sativa (... 273 3e-73 gi|28393806|gb|AAO42312.1| putative actin 4 [Arabidopsis thalian 272 4e-73 gi|21593690|gb|AAM65657.1| actin 4 [Arabidopsis thaliana] 272 4e-73 gi|15231447|ref|NP_190236.1| ACT12 (ACTIN-12); structural con... 272 4e-73 gi|15238387|ref|NP_200745.1| ACT4 (ACTIN 4) [Arabidopsis thal... 272 4e-73 gi|54035683|sp|O81221|ACT_GOSHI Actin >gi|3420239|gb|AAC31886.1| 272 4e-73 gi|92876001|gb|ABE83769.1| Actin/actin-like [Medicago truncatula 272 5e-73 gi|38259662|gb|AAR15174.1| actin [Ricinus communis] 272 5e-73 gi|34541966|gb|AAQ74875.1| actin [Trifolium pratense] 272 5e-73 gi|295885|emb|CAA33874.1| actin [Oryza sativa (indica cultivar-g 272 5e-73 gi|32186906|gb|AAP73457.1| actin [Gossypium hirsutum] 272 5e-73 gi|32186894|gb|AAP73451.1| actin [Gossypium hirsutum] 272 5e-73 gi|6934188|gb|AAF31643.1|AF143208_1 actin [Vigna radiata] 272 5e-73 gi|6103623|gb|AAF03692.1|AF172094_1 actin [Picea rubens] 272 5e-73 gi|166582|gb|AAA32727.1| actin-1 >gi|1145693|gb|AAA98561.1| acti 272 5e-73 gi|115456443|ref|NP_001051822.1| Os03g0836000 [Oryza sativa (... 272 5e-73 gi|6683504|dbj|BAA89214.1| actin isoform B [Mimosa pudica] 272 5e-73 gi|1703107|sp|P53504|ACT1_SORBI Actin-1 >gi|499012|emb|CAA55923. 272 5e-73 gi|18409908|ref|NP_566988.1| ACT3; structural constituent of ... 272 5e-73 gi|11276980|pir||T45915 actin (ACT3) - Arabidopsis thaliana >... 272 5e-73 gi|20322|emb|CAA34356.1| unnamed protein product [Oryza sativa ( 272 5e-73 gi|115454971|ref|NP_001051086.1| Os03g0718100 [Oryza sativa (... 272 5e-73 gi|83423376|emb|CAJ44725.1| actin [Capsicum chinense] 271 1e-72 gi|53759189|gb|AAU93346.1| actin [Saccharum officinarum] 270 1e-72 gi|115461639|ref|NP_001054419.1| Os05g0106600 [Oryza sativa (... 270 1e-72 gi|45593268|gb|AAS68183.1| actin [Brassica napus var. napus] 270 1e-72 gi|15289940|dbj|BAB63635.1| putative actin [Oryza sativa (japoni 270 1e-72 gi|23955912|gb|AAN40685.1| actin [Stevia rebaudiana] 270 1e-72 gi|15076949|gb|AAK82991.1|AF285176_1 actin [Musa x paradisiaca] 270 1e-72 gi|15088544|gb|AAK84080.1|AF326781_1 actin [Triticum monococcum] 270 1e-72 gi|32186904|gb|AAP73456.1| actin [Gossypium hirsutum] 270 1e-72 gi|32186908|gb|AAP73458.1| actin [Gossypium hirsutum] 270 1e-72 gi|32186890|gb|AAP73449.1| actin [Gossypium hirsutum] 270 1e-72 gi|9965319|gb|AAG10041.1|AF288226_1 actin [Setaria italica] 270 1e-72 gi|1531672|gb|AAC49651.1| actin [Striga asiatica] 270 1e-72 gi|115484337|ref|NP_001065830.1| Os11g0163100 [Oryza sativa (... 270 1e-72 gi|24496452|gb|AAN59956.1| actin [Hordeum vulgare] >gi|585331... 270 1e-72 gi|50058115|dbj|BAD27408.1| actin [Nicotiana tabacum] 270 1e-72 gi|461465|sp|Q05214|ACT1_TOBAC Actin >gi|22609|emb|CAA45149.1| a 270 1e-72 gi|15229955|ref|NP_187818.1| ACT11 (ACTIN-11); structural con... 270 1e-72 gi|1168324|sp|P46258|ACT3_PEA Actin-3 >gi|940813|emb|CAA62028.1| 270 1e-72 gi|15242516|ref|NP_196543.1| ACT7 [Arabidopsis thaliana] >gi|... 270 1e-72 gi|112280267|gb|ABI14668.1| actin [Aegiceras corniculatum] 270 2e-72 gi|110084293|gb|ABG49392.1| actin 2 [Torenia fournieri] 270 2e-72 gi|5230841|gb|AAD41039.1|AF112538_1 actin [Malva pusilla] 270 2e-72 gi|1531674|gb|AAC49652.1| actin [Striga asiatica] 270 2e-72 gi|115482882|ref|NP_001065034.1| Os10g0510000 [Oryza sativa (... 270 2e-72 gi|32186902|gb|AAP73455.1| actin [Gossypium hirsutum] 269 3e-72 gi|7960247|gb|AAF71265.1|AF246715_1 actin-like protein [Phalaeno 269 3e-72 gi|1666228|gb|AAB18641.1| actin [Pisum sativum] >gi|1666230|g... 269 3e-72 gi|32186916|gb|AAP73462.1| actin [Gossypium hirsutum] 269 4e-72 gi|32186900|gb|AAP73454.1| actin [Gossypium hirsutum] 269 4e-72 gi|3746940|gb|AAC64128.1| actin 3 [Anemia phyllitidis] 269 4e-72 gi|231503|sp|P30171|ACT11_SOLTU Actin-97 >gi|21544|emb|CAA39280. 269 4e-72 gi|32186892|gb|AAP73450.1| actin [Gossypium hirsutum] 268 5e-72 gi|231505|sp|P30173|ACT13_SOLTU Actin-101 >gi|21534|emb|CAA39281 268 5e-72 gi|55820068|gb|AAT72934.2| stem cambial region actin protein [Eu 268 7e-72 gi|32186910|gb|AAP73459.1| actin [Gossypium hirsutum] 268 7e-72 gi|7211789|gb|AAF40438.1|AF234528_2 actin 1 [Avena nuda] 268 7e-72 gi|37038130|gb|AAQ88109.1| actin 1 [Physcomitrella patens] 268 9e-72 gi|231501|sp|P30169|ACT7_SOLTU Actin-75 >gi|21540|emb|CAA39282.1 268 9e-72 gi|20329|emb|CAA33873.1| actin [Oryza sativa (indica cultivar-gr 267 2e-71 gi|23092520|gb|AAN08622.1| actin [Phalaenopsis hybrid cultivar] 267 2e-71 gi|32186912|gb|AAP73460.1| actin [Gossypium hirsutum] 267 2e-71 gi|7960245|gb|AAF71264.1|AF246714_1 actin-like protein [Phalaeno 267 2e-71 gi|231496|sp|P30167|ACT3_SOLTU Actin-58 >gi|21536|emb|CAA39278.1 267 2e-71 gi|32186896|gb|AAP73452.1| actin [Gossypium hirsutum] 266 2e-71 gi|4139264|gb|AAD03741.1| actin [Brassica napus] 266 2e-71 gi|110084291|gb|ABG49391.1| actin 1 [Torenia fournieri] 266 3e-71 gi|3746938|gb|AAC64127.1| actin 2 [Anemia phyllitidis] 265 5e-71 gi|115441247|ref|NP_001044903.1| Os01g0866100 [Oryza sativa (... 265 6e-71 gi|56785195|dbj|BAD81913.1| actin-like protein [Oryza sativa (ja 265 6e-71 gi|58013197|gb|AAW63030.1| actin [Isatis tinctoria] 265 6e-71 gi|32186898|gb|AAP73453.1| actin [Gossypium hirsutum] 265 6e-71 gi|76800645|sp|P17300|ACT7_ORYSA Actin-7 >gi|56785196|dbj|BAD... 265 6e-71 gi|1168322|sp|P30168|ACT6_SOLTU Actin-71 >gi|21538|emb|CAA39279. 265 6e-71 gi|115464123|ref|NP_001055661.1| Os05g0438800 [Oryza sativa (... 265 8e-71 gi|45861745|gb|AAS78671.1| actin [Capsicum annuum] 265 8e-71 gi|231495|sp|P30164|ACT1_PEA Actin-1 >gi|20637|emb|CAA47899.1| a 265 8e-71 gi|231499|sp|P30165|ACT2_PEA Actin-2 >gi|20635|emb|CAA48609.1| a 265 8e-71 gi|33339126|gb|AAQ14245.1|AF246288_1 actin [Musa acuminata] 264 1e-70 gi|21592948|gb|AAM64898.1| actin 8 [Arabidopsis thaliana] 264 1e-70 gi|1669389|gb|AAC49523.1| actin 8 264 1e-70 gi|15222075|ref|NP_175350.1| ACT8 (ACTIN 8); motor/ protein b... 264 1e-70 gi|1666234|gb|AAB18644.1| actin [Pisum sativum] >gi|1724143|g... 263 2e-70 gi|9082317|gb|AAF82805.1| actin [Helianthus annuus] 263 2e-70 gi|37038156|gb|AAQ88111.1| actin 5 [Physcomitrella patens] 263 3e-70 gi|37038142|gb|AAQ88110.1| actin 3 [Physcomitrella patens] 263 3e-70 gi|37038170|gb|AAQ88112.1| actin 7 [Physcomitrella patens] 263 3e-70 gi|33355923|gb|AAQ16310.1| actin [Phaseolus acutifolius] 263 3e-70 gi|81076210|gb|ABB55389.1| actin-like [Solanum tuberosum] 263 3e-70 gi|30685069|ref|NP_850611.1| ACT2 (ACTIN 2); structural const... 262 4e-70 gi|15230191|ref|NP_188508.1| ACT2 (ACTIN 2); structural const... 262 4e-70 gi|33355921|gb|AAQ16309.1| actin [Vicia faba] 261 1e-69 gi|32186914|gb|AAP73461.1| actin [Gossypium hirsutum] 260 2e-69 gi|15148777|gb|AAK84834.1| actin [Elaeis oleifera] 259 2e-69 gi|4105262|gb|AAD02328.1| actin [Brassica oleracea] 259 4e-69 gi|5902733|sp|O65315|ACT_COLSC Actin >gi|3127133|gb|AAC16054.1| 257 1e-68 gi|72384439|gb|AAZ67555.1| 52O08_9 [Brassica rapa subsp. pekinen 257 2e-68
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 335 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 486 Length of database: 101016998 Length adjustment: 104 Effective length of query: 382 Effective length of database: 71560350 Effective search space: 4150500300 Effective search space used: 4150500300 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)