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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168859358-22949-186716236210.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,457,254 sequences; 1,532,736,548 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig61
Length=560

Distribution of 5 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|78102576|ref|YP_358716.1|  hypothetical protein NisyCp072 [...  41.6    0.002 Gene info
gi|81301606|ref|YP_398902.1|  hypothetical protein NitoCp071 [...  39.3    0.009 Gene info
gi|13346194|gb|AAK19619.1|AF336286_1  GHMYB9 [Gossypium hirsutum]  29.3    9.8   UniGene info
Alignments

>gi|78102576|ref|YP_358716.1| Gene info hypothetical protein NisyCp072 [Nicotiana sylvestris]
 gi|76559645|emb|CAJ32483.1|  hypothetical protein [Nicotiana tabacum]
 gi|77799603|dbj|BAE46692.1| Gene info hypothetical protein [Nicotiana sylvestris]
Length=79

 Score = 41.6 bits (96),  Expect = 0.002
 Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
 Frame = +3

Query  84   MGTTKPVTA*DSIENES**FIGWDGGTNQEKIDLF---*EVS*IDPTN----ERVNIRPR  242
            MGTT+ V A DSIE +    I W G  N+ +I+      E S ++PTN    ERVNIRPR
Sbjct  1    MGTTELVNAKDSIE-KGILMIHWSGWRNEPEINSCIRRSEKSRVNPTNEIGIERVNIRPR  59

Query  243  NLYLL  257
             L+LL
Sbjct  60   KLFLL  64


 Score = 36.6 bits (83),  Expect = 0.061
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 20/71 (28%)
 Frame = +2

Query  125  KRILIIHRVGWRNEPRKN*FILRGVMN*PYE*KSQYSPA------------KPLFIGLQF  268
            K IL+IH  GWRNEP  N  I R         KS+ +P             + LF+ LQ 
Sbjct  15   KGILMIHWSGWRNEPEINSCIRRSE-------KSRVNPTNEIGIERVNIRPRKLFL-LQN  66

Query  269  LARFDRGQNKD  301
            L ++++GQNKD
Sbjct  67   LGQYNKGQNKD  77


>gi|81301606|ref|YP_398902.1| Gene info hypothetical protein NitoCp071 [Nicotiana tomentosiformis]
 gi|80750965|dbj|BAE48041.1| Gene info hypothetical protein [Nicotiana tomentosiformis]
Length=79

 Score = 39.3 bits (90),  Expect = 0.009
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
 Frame = +3

Query  84   MGTTKPVTA*DSIENES**FIGWDGGTNQEKIDLF---*EVS*IDPTN----ERVNIRPR  242
            MGTT+ V A DSIE +    I W G  N+ +I+      E S ++P N    ERVNIRPR
Sbjct  1    MGTTELVNAKDSIE-KGILMIHWSGWRNEPEINSCIRRSEKSRVNPINEIGIERVNIRPR  59

Query  243  NLYLL  257
             L+LL
Sbjct  60   KLFLL  64


 Score = 36.2 bits (82),  Expect = 0.080
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 20/71 (28%)
 Frame = +2

Query  125  KRILIIHRVGWRNEPRKN*FILRGVMN*PYE*KSQYSP------------AKPLFIGLQF  268
            K IL+IH  GWRNEP  N  I R         KS+ +P             + LF+ LQ 
Sbjct  15   KGILMIHWSGWRNEPEINSCIRRSE-------KSRVNPINEIGIERVNIRPRKLFL-LQN  66

Query  269  LARFDRGQNKD  301
            L ++++GQNKD
Sbjct  67   LGQYNKGQNKD  77


>gi|13346194|gb|AAK19619.1|AF336286_1 UniGene info GHMYB9 [Gossypium hirsutum]
Length=264

 Score = 29.3 bits (64),  Expect = 9.8
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
 Frame = +1

Query  121  LKTNPNNSSGGMAERTKKKLIYSERCHELTLRMKES  228
            + TN NN+  G   + +KK+   ERC +L L ++ S
Sbjct  151  INTNSNNNPIGFITKDEKKIPVQERCPDLNLDLRIS  186







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 11, 2007  5:57 PM
  Number of letters in database: 101,016,998
  Number of sequences in database:  283,237
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283237
Number of Hits to DB: 324
Number of extensions: 4
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 560
Length of database: 101016998
Length adjustment: 106
Effective length of query: 454
Effective length of database: 70993876
Effective search space: 5679510080
Effective search space used: 5679510080
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)