Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168859340-11578-10308264052.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig63 Length=565
Score E Sequences producing significant alignments: (Bits) Value gi|62642121|gb|AAX92699.1| histone 3 [Picea abies] >gi|626421... 243 3e-64 gi|15236103|ref|NP_195713.1| DNA binding [Arabidopsis thalian... 243 3e-64 gi|10732809|gb|AAG22548.1|AF304365_1 histone H3 [Rubus idaeus] 242 6e-64 gi|1053047|gb|AAB03538.1| histone H3 >gi|1053049|gb|AAB03539.... 242 6e-64 gi|18698662|gb|AAL78367.1|AF467728_1 disease-resistent-related p 242 7e-64 gi|1053057|gb|AAB03542.1| histone H3 241 1e-63 gi|62642119|gb|AAX92698.1| histone 3 [Picea abies] 241 1e-63 gi|92880832|gb|ABE85856.1| Histone core [Medicago truncatula] 241 1e-63 gi|1053045|gb|AAB03537.1| histone H3 240 2e-63 gi|33772147|gb|AAQ54510.1| histone 3 [Malus x domestica] 239 5e-63 gi|119370646|sp|Q402E2|H33A_LILLO Histone H3.3a (Somatic-like... 239 5e-63 gi|116060503|emb|CAL55839.1| Histones H3 and H4 (ISS) [Ostreococ 238 8e-63 gi|1053059|gb|AAB03543.1| histone H3 238 8e-63 gi|60543010|dbj|BAD90754.1| histone 3 [Conocephalum conicum] ... 238 1e-62 gi|72384424|gb|AAZ67540.1| 4D11_26 [Brassica rapa subsp. pekinen 236 3e-62 gi|62701879|gb|AAX92952.1| histone H3 - maize [Oryza sativa (jap 236 3e-62 gi|15232146|ref|NP_189372.1| DNA binding [Arabidopsis thalian... 236 3e-62 gi|55977041|sp|P68427|H32_PEA Histone H3.2 >gi|55977043|sp|P6... 236 4e-62 gi|166384|gb|AAA32655.1| histone H3 (H3-1.1) 234 1e-61 gi|122090|sp|P08437|H3_VOLCA Histone H3 >gi|2119017|pir||S595... 234 1e-61 gi|55775689|gb|AAV65112.1| histone 3 [Camellia sinensis] 234 2e-61 gi|15222297|ref|NP_177690.1| DNA binding [Arabidopsis thalian... 234 2e-61 gi|60543120|dbj|BAD90809.1| histone 3 [Conocephalum conicum] 234 2e-61 gi|21555021|gb|AAM63756.1| histone H3 protein, putative [Arabido 234 2e-61 gi|72398503|gb|AAZ72657.1| histone H3.3 [Craterostigma plantagin 234 2e-61 gi|576633|gb|AAA98455.1| histone H3 233 3e-61 gi|122083|sp|P08903|H32_ENCAL Histone H3.2 >gi|224865|prf||12022 233 3e-61 gi|169793|gb|AAA33907.1| histone 3 >gi|940018|gb|AAA74190.1| his 233 3e-61 gi|15222272|ref|NP_172794.1| DNA binding [Arabidopsis thalian... 232 6e-61 gi|119370645|sp|Q402E1|H32_LILLO Histone H3.2 >gi|73808028|db... 232 6e-61 gi|82568471|dbj|BAE48436.1| histone soH3-2 [Lilium longiflorum] 232 8e-61 gi|68342452|gb|AAY90124.1| histone 3 [Rheum australe] 231 1e-60 gi|60543098|dbj|BAD90798.1| histone 3 [Conocephalum conicum] 230 3e-60 gi|9369379|gb|AAF87128.1|AC006434_24 F10A5.19 [Arabidopsis thali 229 4e-60 gi|1708109|sp|P50564|H3_CHLRE Histone H3 >gi|790700|gb|AAA99965. 229 4e-60 gi|488571|gb|AAB36495.1| histone H3.2 [Medicago sativa] 229 7e-60 gi|119370647|sp|Q2Z2F4|H33B_LILLO Histone H3.3b (Somatic-like... 229 7e-60 gi|15238430|ref|NP_201338.1| DNA binding [Arabidopsis thalian... 226 4e-59 gi|82568467|dbj|BAE48434.1| histone soH3-1 [Lilium longiflorum] 225 7e-59 gi|60543056|dbj|BAD90777.1| histone 3 [Conocephalum conicum] ... 225 9e-59 gi|1053053|gb|AAB03541.1| histone H3 225 9e-59 gi|488573|gb|AAB36496.1| histone H3.2 precursor [Medicago sativa 223 3e-58 gi|116057937|emb|CAL54140.1| Histones H3 and H4 (ISS) [Ostreococ 222 8e-58 gi|60543076|dbj|BAD90787.1| histone 3 [Conocephalum conicum] 222 8e-58 gi|73919914|sp|Q5MYA4|H32_CICIN Histone H3.2 >gi|40217937|gb|... 222 8e-58 gi|60543064|dbj|BAD90781.1| histone 3 [Conocephalum conicum] 221 1e-57 gi|60543106|dbj|BAD90802.1| histone 3 [Conocephalum conicum] 220 2e-57 gi|60543104|dbj|BAD90801.1| histone 3 [Conocephalum conicum] 220 3e-57 gi|60543018|dbj|BAD90758.1| histone 3 [Conocephalum conicum] ... 220 3e-57 gi|73919917|sp|Q5DWI3|H3_MARPO Histone H3 >gi|60543034|dbj|BA... 220 3e-57 gi|60543040|dbj|BAD90769.1| histone 3 [Conocephalum supradecompo 219 4e-57 gi|60543012|dbj|BAD90755.1| histone 3 [Conocephalum conicum] 219 4e-57 gi|15223698|ref|NP_173418.1| DNA binding [Arabidopsis thalian... 219 4e-57 gi|60543032|dbj|BAD90765.1| histone 3 [Conocephalum conicum] 219 7e-57 gi|60543024|dbj|BAD90761.1| histone 3 [Conocephalum conicum] 218 9e-57 gi|60543042|dbj|BAD90770.1| histone 3 [Conocephalum supradecompo 218 9e-57 gi|60543082|dbj|BAD90790.1| histone 3 [Marchantia polymorpha] 218 9e-57 gi|60543020|dbj|BAD90759.1| histone 3 [Conocephalum conicum] 218 9e-57 gi|60543046|dbj|BAD90772.1| histone 3 [Conocephalum supradecompo 218 1e-56 gi|60543074|dbj|BAD90786.1| histone 3 [Conocephalum conicum] 218 2e-56 gi|60543048|dbj|BAD90773.1| histone 3 [Conocephalum supradecompo 217 2e-56 gi|60543110|dbj|BAD90804.1| histone 3 [Conocephalum conicum] 217 2e-56 gi|60543084|dbj|BAD90791.1| histone 3 [Marchantia polymorpha] 217 2e-56 gi|60543052|dbj|BAD90775.1| histone 3 [Conocephalum supradecompo 217 2e-56 gi|60543050|dbj|BAD90774.1| histone 3 [Conocephalum supradecompo 217 3e-56 gi|60543014|dbj|BAD90756.1| histone 3 [Conocephalum conicum] 217 3e-56 gi|60543086|dbj|BAD90792.1| histone 3 [Marchantia polymorpha] 217 3e-56 gi|60543058|dbj|BAD90778.1| histone 3 [Conocephalum conicum] 217 3e-56 gi|60543030|dbj|BAD90764.1| histone 3 [Conocephalum conicum] 217 3e-56 gi|60543116|dbj|BAD90807.1| histone 3 [Conocephalum conicum] 216 3e-56 gi|60543070|dbj|BAD90784.1| histone 3 [Conocephalum conicum] 216 3e-56 gi|60543068|dbj|BAD90783.1| histone 3 [Conocephalum conicum] 216 3e-56 gi|60543118|dbj|BAD90808.1| histone 3 [Conocephalum conicum] 216 4e-56 gi|60543112|dbj|BAD90805.1| histone 3 [Conocephalum conicum] 216 6e-56 gi|60543036|dbj|BAD90767.1| histone 3 [Conocephalum supradecompo 215 7e-56 gi|60543080|dbj|BAD90789.1| histone 3 [Marchantia polymorpha] 214 2e-55 gi|19611|emb|CAA31966.1| histone H3 (AA 1-123) [Medicago sati... 214 2e-55 gi|60543102|dbj|BAD90800.1| histone 3 [Conocephalum conicum] 213 5e-55 gi|829279|emb|CAA31967.1| histone H3 (AA 1-120) [Medicago sativa 213 5e-55 gi|60543028|dbj|BAD90763.1| histone 3 [Conocephalum conicum] 212 8e-55 gi|4574208|gb|AAD23951.1|AF093108_1 histone H3 [Tortula ruralis] 205 8e-53 gi|60543078|dbj|BAD90788.1| histone 3 [Marchantia polymorpha] 202 5e-52 gi|60543066|dbj|BAD90782.1| histone 3 [Conocephalum conicum] 199 4e-51 gi|60543060|dbj|BAD90779.1| histone 3 [Conocephalum conicum] 198 1e-50 gi|1197519|emb|CAA64881.1| histone H3 [Narcissus pseudonarcissus 197 2e-50 gi|115488324|ref|NP_001066649.1| Os12g0415800 [Oryza sativa (... 194 1e-49 gi|76362311|dbj|BAE45284.1| histone [Cornopteris decurrenti-alat 194 2e-49 gi|34101261|gb|AAQ57668.1| histone H3-D [Amphicarpaea bractea... 192 5e-49 gi|76362313|dbj|BAE45285.1| histone [Nephrolepis auriculata] 192 5e-49 gi|115466554|ref|NP_001056876.1| Os06g0160000 [Oryza sativa (... 191 2e-48 gi|115488322|ref|NP_001066648.1| Os12g0415400 [Oryza sativa (... 187 2e-47 gi|34101298|gb|AAQ57676.1| histone H3-D [Amphicarpaea bracteata] 186 4e-47 gi|34101265|gb|AAQ57670.1| histone H3-D [Amphicarpaea bracteata] 184 1e-46 gi|47496935|dbj|BAD20005.1| putative histone H3.2 [Oryza sativa 184 1e-46 gi|76362293|dbj|BAE45275.1| histone [Conocephalum conicum] 183 3e-46 gi|34101270|gb|AAQ57671.1| histone H3-D [Amphicarpaea bracteata] 182 9e-46 gi|76362285|dbj|BAE45271.1| histone [Conocephalum conicum] 179 6e-45 gi|12641619|emb|CAC27454.1| histone H3 [Beta vulgaris subsp. vul 177 2e-44 gi|76362289|dbj|BAE45273.1| histone [Conocephalum conicum] 174 2e-43 gi|47496932|dbj|BAD20002.1| putative histone H3.2 [Oryza sativa 174 2e-43
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 450 Number of extensions: 3 Number of successful extensions: 1 Number of sequences better than 10: 1 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 565 Length of database: 101016998 Length adjustment: 107 Effective length of query: 458 Effective length of database: 70710639 Effective search space: 5727561759 Effective search space used: 5727561759 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)