Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168859536-22577-104492163189.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig66 Length=563
Score E Sequences producing significant alignments: (Bits) Value gi|92896308|gb|ABE93145.1| Cell division protein FtsZ [Medicago 311 8e-85 gi|17402471|emb|CAD13178.1| alpha-tubulin [Nicotiana tabacum] 311 8e-85 gi|17402467|emb|CAD13176.1| alpha-tubulin [Nicotiana tabacum] 311 8e-85 gi|77745465|gb|ABB02631.1| unknown [Solanum tuberosum] 311 8e-85 gi|30683070|ref|NP_849388.1| TUA6 [Arabidopsis thaliana] 311 8e-85 gi|15233627|ref|NP_193232.1| TUA6 [Arabidopsis thaliana] >gi|... 311 8e-85 gi|1174592|sp|P46259|TBA1_PEA Tubulin alpha-1 chain >gi|525332|g 311 8e-85 gi|464849|sp|P33629|TBA_PRUDU Tubulin alpha chain >gi|20413|e... 311 8e-85 gi|8928432|sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain >gi|416... 311 8e-85 gi|17402469|emb|CAD13177.1| alpha-tubulin [Nicotiana tabacum] 311 1e-84 gi|115484939|ref|NP_001067613.1| Os11g0247300 [Oryza sativa (... 311 1e-84 gi|1556446|gb|AAB08791.1| alpha tubulin [Hordeum vulgare] 310 2e-84 gi|8928408|sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain >gi|409827... 310 2e-84 gi|8928422|sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain >gi|161... 310 2e-84 gi|110742192|dbj|BAE99023.1| tubulin alpha-2/alpha-4 chain [Arab 309 4e-84 gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menzi... 309 4e-84 gi|16226462|gb|AAL16174.1|AF428406_1 AT4g14960/dl3520c [Arabidop 309 4e-84 gi|54036493|sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain (Alpha... 309 4e-84 gi|54036492|sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain (Alpha... 309 4e-84 gi|15220329|ref|NP_171974.1| TUA4 [Arabidopsis thaliana] >gi|... 309 4e-84 gi|1136122|emb|CAA62917.1| alfa-tubulin [Oryza sativa (japonica 309 5e-84 gi|23452339|gb|AAN33000.1| alpha-tubulin 4 [Gossypium hirsutum] 309 5e-84 gi|27819095|gb|AAO23139.1| alpha tubulin [Populus tremuloides] 309 5e-84 gi|29423813|gb|AAO73546.1| alpha-tubulin [Ceratopteris richar... 309 5e-84 gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus tremuloides] 309 5e-84 gi|51988174|emb|CAE52515.1| alpha tubulin [Setaria viridis] 308 6e-84 gi|11967906|dbj|BAB19779.1| alpha tubulin [Nicotiana tabacum] 308 6e-84 gi|110617748|gb|ABG78593.1| alpha-tubulin [Oryza sativa (japonic 308 8e-84 gi|135411|sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain (Alpha-2... 308 8e-84 gi|3163946|emb|CAA06619.1| alpha-tubulin 1 [Eleusine indica] 308 8e-84 gi|6094429|sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain (Alpha-... 308 8e-84 gi|135398|sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain (Alpha-1... 308 8e-84 gi|34733239|gb|AAQ81585.1| putative tubulin alpha-2/alpha-4 chai 308 1e-83 gi|6723478|emb|CAB66336.1| alpha-tubulin [Betula pendula] 308 1e-83 gi|25396550|dbj|BAC24800.1| alpha tubulin [Physcomitrella patens 306 2e-83 gi|49036476|sp|Q9FT36|TBA_DAUCA Tubulin alpha chain >gi|99659... 306 3e-83 gi|15029368|gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa 306 4e-83 gi|60476110|gb|AAX21196.1| putative alpha-tubulin [Solanum betac 305 5e-83 gi|91940067|gb|ABE66388.1| alpha-tubulin [Striga asiatica] 305 7e-83 gi|54036494|sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain (Alpha... 304 2e-82 gi|108710848|gb|ABF98643.1| Tubulin alpha-1 chain, putative, ... 303 3e-82 gi|115455063|ref|NP_001051132.1| Os03g0726100 [Oryza sativa (... 303 3e-82 gi|8928409|sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain >gi|416222... 302 5e-82 gi|2613143|gb|AAB84298.1| tubulin [Oryza sativa] 301 1e-81 gi|25396545|dbj|BAC24799.1| alpha tubulin [Physcomitrella patens 301 1e-81 gi|1136120|emb|CAA62916.1| alpha-tubulin [Oryza sativa (japonica 300 2e-81 gi|99082883|gb|ABC59068.2| alpha tubulin 1 [Camellia sinensis] 300 3e-81 gi|2625156|gb|AAB86649.1| alpha-tubulin [Chloromonas sp. ANT1] 299 5e-81 gi|63126536|gb|AAX63396.1| alpha-tubulin [Haematococcus pluviali 299 5e-81 gi|464840|sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain >gi|2964... 299 5e-81 gi|135417|sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain (Alpha-3... 298 7e-81 gi|135394|sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain >gi|1674... 298 9e-81 gi|135404|sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain ... 298 9e-81 gi|135409|sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain >gi|167450| 298 9e-81 gi|2625154|gb|AAB86648.1| alpha-tubulin [Chloromonas sp. ANT3] 296 3e-80 gi|51988172|emb|CAE52514.1| alpha tubulin [Setaria viridis] 293 4e-79 gi|115472953|ref|NP_001060075.1| Os07g0574800 [Oryza sativa (... 291 1e-78 gi|7271241|emb|CAB77671.1| alpha-tubulin [Miscanthus sinensis f. 291 1e-78 gi|15241168|ref|NP_197478.1| TUA3 [Arabidopsis thaliana] >gi|... 291 1e-78 gi|37936218|emb|CAD26886.1| alpha-tubulin [Miscanthus sinensis] 288 7e-78 gi|37936212|emb|CAD24766.1| alpha-tubulin [Miscanthus sinensis] 288 7e-78 gi|6094431|sp|O22349|TBA3_ELEIN Tubulin alpha-3 chain (Alpha-... 288 7e-78 gi|464846|sp|P33627|TBA6_MAIZE Tubulin alpha-6 chain (Alpha-6... 288 7e-78 gi|37936220|emb|CAD26887.1| alpha-tubulin [Miscanthus sinensis] 288 1e-77 gi|37936214|emb|CAD24767.1| alpha-tubulin [Miscanthus floridulus 288 1e-77 gi|37936232|emb|CAD26893.1| alpha-tubulin [Miscanthus floridulus 288 1e-77 gi|83283967|gb|ABC01891.1| tubulin alpha-5 chain-like protein [S 287 2e-77 gi|82400128|gb|ABB72803.1| alpha-tubulin-like protein [Solanum t 286 3e-77 gi|37936228|emb|CAD26891.1| alpha-tubulin [Miscanthus floridulus 286 3e-77 gi|37936210|emb|CAD24765.1| alpha-tubulin [Miscanthus sinensis] 286 3e-77 gi|8928419|sp|Q43473|TBA1_HORVU Tubulin alpha-1 chain >gi|147... 286 3e-77 gi|62546341|gb|AAX86047.1| tubulin A [Glycine max] 286 4e-77 gi|401161|sp|Q02245|TBA5_MAIZE Tubulin alpha-5 chain (Alpha-5... 285 6e-77 gi|57867865|gb|AAW57312.1| alpha-tubulin [Ceratopteris richardii 285 8e-77 gi|7271243|emb|CAB77672.1| alpha-tubulin [Miscanthus transmorris 284 1e-76 gi|37936230|emb|CAD26892.1| alpha-tubulin [Miscanthus floridulus 284 2e-76 gi|8928404|sp|Q38771|TBA_AVESA Tubulin alpha chain >gi|127920... 284 2e-76 gi|37936226|emb|CAD26890.1| alpha-tubulin [Miscanthus sinensis v 283 2e-76 gi|37936224|emb|CAD26889.1| alpha-tubulin [Miscanthus transmorri 283 3e-76 gi|116059394|emb|CAL55101.1| Beta tubulin (ISS) [Ostreococcus ta 281 8e-76 gi|37936216|emb|CAD24768.1| alpha-tubulin [Miscanthus floridulus 281 1e-75 gi|37936222|emb|CAD26888.1| alpha-tubulin [Miscanthus transmorri 281 1e-75 gi|15217737|ref|NP_176654.1| TUA1 (ALPHA-1 TUBULIN) [Arabidop... 280 3e-75 gi|226261|prf||1503274A alpha1 tubulin 280 3e-75 gi|77999295|gb|ABB16994.1| unknown [Solanum tuberosum] 278 9e-75 gi|6094430|sp|O22348|TBA2_ELEIN Tubulin alpha-2 chain (Alpha-... 277 2e-74 gi|115451599|ref|NP_001049400.1| Os03g0219300 [Oryza sativa (... 275 8e-74 gi|76257855|gb|ABA41245.1| alpha-tubulin [Mesostigma viride] 273 2e-73 gi|116060752|emb|CAL57230.1| Beta tubulin (ISS) [Ostreococcus ta 273 4e-73 gi|76257853|gb|ABA41244.1| alpha-tubulin [Mesostigma viride] 272 5e-73 gi|49659780|gb|AAT68202.1| alpha 1 tubulin [Cynodon dactylon] 270 3e-72 gi|76257847|gb|ABA41241.1| alpha-tubulin [Coleochaete scutata] 269 6e-72 gi|93359562|gb|ABF13307.1| alpha-tubulin [Phaseolus vulgaris] 269 6e-72 gi|76257851|gb|ABA41243.1| alpha-tubulin [Mantoniella squamata] 268 1e-71 gi|76257861|gb|ABA41248.1| alpha-tubulin [Pterosperma cristatum] 265 6e-71 gi|76257849|gb|ABA41242.1| alpha-tubulin [Mantoniella squamata] 264 1e-70 gi|92881795|gb|ABE86411.1| Cell division protein FtsZ [Medicago 264 1e-70 gi|76573359|gb|ABA46784.1| alpha-tubulin-like protein [Solanum t 263 3e-70 gi|76257863|gb|ABA41249.1| alpha-tubulin [Pterosperma cristatum] 263 4e-70 gi|76257859|gb|ABA41247.1| alpha-tubulin [Nephroselmis rotunda] 261 9e-70
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 369 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 563 Length of database: 101016998 Length adjustment: 107 Effective length of query: 456 Effective length of database: 70710639 Effective search space: 5656851120 Effective search space used: 5656851120 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)