Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168859590-3838-179082055567.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig70 Length=529
Score E Sequences producing significant alignments: (Bits) Value gi|115478518|ref|NP_001062854.1| Os09g0320400 [Oryza sativa (... 99.8 5e-21 gi|15224977|ref|NP_178636.1| permease [Arabidopsis thaliana] ... 99.4 7e-21 gi|115456289|ref|NP_001051745.1| Os03g0823800 [Oryza sativa (... 97.8 2e-20 gi|115440067|ref|NP_001044313.1| Os01g0759900 [Oryza sativa (... 97.4 3e-20 gi|15226243|ref|NP_180966.1| permease [Arabidopsis thaliana] ... 97.4 3e-20 gi|14334908|gb|AAK59632.1| putative membrane transporter protein 97.4 3e-20 gi|14587294|dbj|BAB61205.1| putative permease 1 [Oryza sativa... 97.4 3e-20 gi|49333379|gb|AAT64019.1| putative permease [Gossypium hirsutum 97.1 3e-20 gi|49333395|gb|AAT64034.1| putative permease [Gossypium hirsutum 97.1 3e-20 gi|89330191|emb|CAJ84113.1| root uracil permease 1 [Oryza sativa 95.1 1e-19 gi|115448609|ref|NP_001048084.1| Os02g0741800 [Oryza sativa (... 95.1 1e-19 gi|92875069|gb|ABE83225.1| Xanthine/uracil/vitamin C permease... 94.4 2e-19 gi|15222849|ref|NP_175418.1| permease [Arabidopsis thaliana] ... 94.0 3e-19 gi|8569102|gb|AAF76447.1|AC015445_14 Identical to permease ho... 94.0 3e-19 gi|115476444|ref|NP_001061818.1| Os08g0420600 [Oryza sativa (... 94.0 3e-19 gi|115476114|ref|NP_001061653.1| Os08g0369000 [Oryza sativa (... 93.6 4e-19 gi|38637220|dbj|BAD03486.1| putative permease 1 [Oryza sativa... 93.6 4e-19 gi|79331976|ref|NP_001032127.1| permease [Arabidopsis thaliana] 91.7 1e-18 gi|18643260|gb|AAL76261.1|AF466824_1 putative permease 1 [Arabid 91.7 1e-18 gi|21450871|gb|AAK59508.2| putative permease 1 [Arabidopsis thal 91.7 1e-18 gi|115489324|ref|NP_001067149.1| Os12g0583900 [Oryza sativa (... 91.7 1e-18 gi|115478929|ref|NP_001063058.1| Os09g0381100 [Oryza sativa (... 91.7 1e-18 gi|15241994|ref|NP_201094.1| permease [Arabidopsis thaliana] ... 91.7 1e-18 gi|22327675|ref|NP_199810.2| permease [Arabidopsis thaliana] ... 91.3 2e-18 gi|9758398|dbj|BAB08803.1| permease [Arabidopsis thaliana] 91.3 2e-18 gi|5091547|gb|AAD39576.1|AC007067_16 T10O24.16 [Arabidopsis thal 90.5 3e-18 gi|15225319|ref|NP_180219.1| PDE135 (PIGMENT DEFECTIVE EMBRYO... 90.1 4e-18 gi|27436380|gb|AAO13361.1| putative transporter [Arabidopsis tha 90.1 4e-18 gi|4249382|gb|AAD14479.1|AAD14479 Strong similarity to gi|333... 89.7 5e-18 gi|30696385|ref|NP_176211.2| permease [Arabidopsis thaliana] 89.7 5e-18 gi|15218557|ref|NP_172524.1| permease [Arabidopsis thaliana] ... 89.0 9e-18 gi|62183958|gb|AAX73299.1| putative permease I [Lycopersicon esc 88.6 1e-17 gi|110738137|dbj|BAF01000.1| hypothetical protein [Arabidopsis t 87.8 2e-17 gi|92872638|gb|ABE81237.1| Xanthine/uracil/vitamin C permease [M 87.8 2e-17 gi|2190545|gb|AAB60909.1| Similar to Zea mays permease 1 (gb|... 87.8 2e-17 gi|3202038|gb|AAC19400.1| permease 1 [Mesembryanthemum crystalli 85.5 1e-16 gi|42562976|ref|NP_176733.2| permease [Arabidopsis thaliana] 85.5 1e-16 gi|115454737|ref|NP_001050969.1| Os03g0694500 [Oryza sativa (... 84.7 2e-16 gi|28273413|gb|AAO38499.1| putative permease [Oryza sativa (japo 84.7 2e-16 gi|15239419|ref|NP_197924.1| permease [Arabidopsis thaliana] 84.3 2e-16 gi|7844006|gb|AAB17501.2| permease 1 [Zea mays] 84.0 3e-16 gi|3202040|gb|AAC19401.1| permease 1 [Mesembryanthemum crystalli 83.6 4e-16 gi|108711825|gb|ABF99620.1| Permease I, putative, expressed [... 60.8 3e-09 gi|42571817|ref|NP_973999.1| permease [Arabidopsis thaliana] 56.2 7e-08 gi|113205157|gb|AAX95758.2| xanthine/uracil permease family p... 55.5 1e-07 gi|79499196|ref|NP_195518.2| permease [Arabidopsis thaliana] ... 51.2 2e-06 gi|4467111|emb|CAB37545.1| putative protein [Arabidopsis thal... 51.2 2e-06 gi|3860251|gb|AAC73019.1| putative membrane transporter [Arabido 51.2 2e-06 gi|79602299|ref|NP_973550.2| permease [Arabidopsis thaliana] 51.2 2e-06 gi|30683653|ref|NP_850108.1| permease [Arabidopsis thaliana] ... 51.2 2e-06 gi|26452174|dbj|BAC43175.1| unknown protein [Arabidopsis thal... 51.2 2e-06 gi|115472153|ref|NP_001059675.1| Os07g0490500 [Oryza sativa (... 47.8 2e-05 gi|115441149|ref|NP_001044854.1| Os01g0857500 [Oryza sativa (... 46.2 7e-05 gi|115485783|ref|NP_001068035.1| Os11g0539600 [Oryza sativa (... 30.4 3.9 gi|15241349|ref|NP_196928.1| unknown protein [Arabidopsis tha... 30.0 5.0 gi|21593265|gb|AAM65214.1| unknown [Arabidopsis thaliana] 30.0 5.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 399 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 529 Length of database: 101016998 Length adjustment: 106 Effective length of query: 423 Effective length of database: 70993876 Effective search space: 4969571320 Effective search space used: 4969571320 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)