Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168920956-16093-14976785366.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig76 Length=509
Score E Sequences producing significant alignments: (Bits) Value gi|15215721|gb|AAK91406.1| AT3g62830/F26K9_260 [Arabidopsis t... 166 5e-41 gi|15229334|ref|NP_191842.1| UXS2 (UDP-GLUCURONIC ACID DECARB... 166 5e-41 gi|13605583|gb|AAK32785.1|AF361617_1 AT3g62830/F26K9_260 [Ara... 166 5e-41 gi|60932254|gb|AAX37335.1| UDP-glucuronic acid decarboxylase 2 [ 165 9e-41 gi|92878321|gb|ABE84980.1| NAD-binding site; Nucleotide sugar... 162 6e-40 gi|48093465|gb|AAT40109.1| putative UDP-glucuronate decarboxylas 155 6e-38 gi|54287661|gb|AAV31405.1| putative UDP-glucuronic acid decar... 152 5e-37 gi|115463437|ref|NP_001055318.1| Os05g0363200 [Oryza sativa (... 152 5e-37 gi|15227109|ref|NP_182287.1| UXS4 (UDP-XYLOSE SYNTHASE 4); ca... 151 1e-36 gi|115474027|ref|NP_001060612.1| Os07g0674100 [Oryza sativa (... 148 1e-35 gi|115436236|ref|NP_001042876.1| Os01g0315800 [Oryza sativa (... 137 3e-32 gi|48093467|gb|AAT40110.1| putative UDP-glucuronate decarboxylas 125 8e-29 gi|50659028|gb|AAT80327.1| UDP-D-glucuronate decarboxylase [Hord 124 2e-28 gi|17473549|gb|AAL38251.1| dTDP-glucose 4-6-dehydratase-like ... 122 9e-28 gi|30693847|ref|NP_190920.2| UXS1 (UDP-GLUCURONIC ACID DECARB... 122 9e-28 gi|30693844|ref|NP_850694.1| UXS1 (UDP-GLUCURONIC ACID DECARB... 122 9e-28 gi|14595662|gb|AAK70880.1|AF387787_1 UDP-glucuronic acid deca... 122 9e-28 gi|60932236|gb|AAX37334.1| UDP-glucuronic acid decarboxylase 1 [ 121 2e-27 gi|50659030|gb|AAT80328.1| UDP-D-glucuronate decarboxylase [Hord 118 1e-26 gi|108707510|gb|ABF95305.1| NAD-dependent epimerase/dehydrata... 115 8e-26 gi|115452277|ref|NP_001049739.1| Os03g0280800 [Oryza sativa (... 100 3e-21 gi|50659024|gb|AAT80325.1| UDP-D-glucuronate decarboxylase [Hord 95.9 7e-20 gi|56201956|dbj|BAD73406.1| UDP-glucuronic acid decarboxylase... 92.8 6e-19 gi|56201957|dbj|BAD73407.1| UDP-glucuronic acid decarboxylase... 92.8 6e-19 gi|115440915|ref|NP_001044737.1| Os01g0837300 [Oryza sativa (... 92.8 6e-19 gi|116055038|emb|CAL57434.1| GDP-mannose 4,6 dehydratase (ISS) [ 78.2 1e-14 gi|116059462|emb|CAL55169.1| GDP-mannose 4,6 dehydratase (ISS) [ 63.5 4e-10 gi|48093463|gb|AAT40108.1| putative UDP-glucuronate decarboxylas 54.7 2e-07 gi|6469141|emb|CAB61752.1| dTDP-glucose 4-6-dehydratase [Cicer a 53.1 5e-07 gi|48093461|gb|AAT40107.1| UDP-glucuronate decarboxylase 1 [Nico 53.1 5e-07 gi|13591616|dbj|BAB40967.1| UDP-D-glucuronate carboxy-lyase [Pis 53.1 5e-07 gi|108707480|gb|ABF95275.1| RmlD substrate binding domain con... 52.8 7e-07 gi|57899532|dbj|BAD87046.1| MDR-like ABC transporter-like [Or... 52.8 7e-07 gi|50659026|gb|AAT80326.1| UDP-D-glucuronate decarboxylase [Hord 52.8 7e-07 gi|11121508|emb|CAC14890.1| d-TDP-glucose dehydratase [Phragmite 52.8 7e-07 gi|115452245|ref|NP_001049723.1| Os03g0278000 [Oryza sativa (... 52.8 7e-07 gi|60932273|gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [ 52.0 1e-06 gi|15226950|ref|NP_180443.1| NAD binding / catalytic [Arabido... 52.0 1e-06 gi|15237853|ref|NP_200737.1| UXS3 (UDP-GLUCURONIC ACID DECARB... 50.4 3e-06 gi|15231432|ref|NP_190228.1| UXS5; catalytic [Arabidopsis tha... 50.1 4e-06 gi|92889216|gb|ABE89734.1| NAD-dependent epimerase/dehydratas... 49.7 6e-06 gi|84468266|dbj|BAE71216.1| putative NAD dependent epimerase [Tr 48.5 1e-05 gi|14030703|gb|AAK53026.1|AF375442_1 AT5g59290/mnc17_180 [Ara... 47.8 2e-05 gi|115451921|ref|NP_001049561.1| Os03g0249500 [Oryza sativa (... 47.4 3e-05 gi|79013992|gb|ABB51650.1| UDP-glucuronic acid 4-epimerase [Zea 47.0 4e-05 gi|115480267|ref|NP_001063727.1| Os09g0526700 [Oryza sativa (... 47.0 4e-05 gi|26106014|dbj|BAC41499.1| putative UDP-glucose 4-epimerase ... 47.0 4e-05 gi|15293119|gb|AAK93670.1| putative nucleotide sugar epimerase [ 45.4 1e-04 gi|15234486|ref|NP_192962.1| GAE5 (UDP-D-GLUCURONATE 4-EPIMER... 45.4 1e-04 gi|115449159|ref|NP_001048359.1| Os02g0791500 [Oryza sativa (... 45.1 1e-04 gi|115480003|ref|NP_001063595.1| Os09g0504000 [Oryza sativa (... 44.7 2e-04 gi|61658228|gb|AAX49503.1| UDP-D-glucose epimerase 3 [Hordeum vu 44.7 2e-04 gi|15225451|ref|NP_182056.1| GAE4 (UDP-D-GLUCURONATE 4-EPIMER... 44.7 2e-04 gi|90855456|dbj|BAE92559.1| UDP-galactose epimerase [Paspalum va 43.9 3e-04 gi|24417280|gb|AAN60250.1| unknown [Arabidopsis thaliana] 43.9 3e-04 gi|15229524|ref|NP_189024.1| GAE6 (UDP-D-GLUCURONATE 4-EPIMER... 43.9 3e-04 gi|92878845|gb|ABE85249.1| NAD-dependent epimerase/dehydratas... 43.5 4e-04 gi|15236712|ref|NP_191922.1| GAE3 (UDP-D-GLUCURONATE 4-EPIMER... 43.5 4e-04 gi|21536982|gb|AAM61323.1| nucleotide sugar epimerase, putative 43.1 5e-04 gi|19852115|gb|AAM00012.1|AF493609_1 UDP-glucose 4-epimerase [Ac 43.1 5e-04 gi|115477399|ref|NP_001062295.1| Os08g0526100 [Oryza sativa (... 43.1 5e-04 gi|15217591|ref|NP_171702.1| GAE2 (UDP-D-GLUCURONATE 4-EPIMER... 43.1 5e-04 gi|29647497|dbj|BAC75426.1| putative type 1 capsule synthesis... 43.1 5e-04 gi|116059635|emb|CAL55342.1| UDP-glucose 4-epimerase/UDP-sulf... 42.7 7e-04 gi|51091715|dbj|BAD36515.1| putative uridine diphosphate gala... 42.7 7e-04 gi|33186647|gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosu 42.4 9e-04 gi|116059187|emb|CAL54894.1| UDP-glucose 4-epimerase/UDP-sulf... 41.6 0.002 gi|32130594|gb|AAP68981.1| UDP-glucose-4-epimerase [Zea mays] 41.2 0.002 gi|21536846|gb|AAM61178.1| UDPglucose 4-epimerase-like protein [ 41.2 0.002 gi|15236663|ref|NP_194123.1| NAD binding / UDP-glucose 4-epim... 41.2 0.002 gi|61658230|gb|AAX49504.1| UDP-D-glucose epimerase 1 [Hordeum vu 40.8 0.003 gi|15234745|ref|NP_194773.1| GAE1 (UDP-D-GLUCURONATE 4-EPIMER... 40.8 0.003 gi|11386774|sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEP... 40.8 0.003 gi|1143392|emb|CAA90941.1| uridine diphosphate glucose epimerase 40.4 0.003 gi|15222072|ref|NP_172738.1| UDP-glucose 4-epimerase [Arabido... 40.4 0.003 gi|116058031|emb|CAL54234.1| GDP-mannose 4,6 dehydratase (ISS) [ 40.0 0.004 gi|21553659|gb|AAM62752.1| UDP-galactose 4-epimerase-like protei 40.0 0.004 gi|15236988|ref|NP_192834.1| NAD binding / UDP-glucose 4-epim... 40.0 0.004 gi|12643850|sp|Q9SN58|GALE2_ARATH Probable UDP-glucose 4-epim... 40.0 0.004 gi|11386762|sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase (Gala... 40.0 0.004 gi|115464891|ref|NP_001056045.1| Os05g0516400 [Oryza sativa (... 39.3 0.008 gi|12323247|gb|AAG51599.1|AC010795_3 uridine diphosphate gluc... 39.3 0.008 gi|18407751|ref|NP_564811.1| NAD binding / UDP-glucose 4-epim... 39.3 0.008 gi|6633809|gb|AAF19668.1|AC009519_2 F1N19.2 [Arabidopsis thalian 38.9 0.010 gi|15217653|ref|NP_176625.1| RHD1 (ROOT HAIR DEFECTIVE 1) [Ar... 38.9 0.010 gi|115465825|ref|NP_001056512.1| Os05g0595100 [Oryza sativa (... 38.9 0.010 gi|56784596|dbj|BAD81643.1| hypothetical protein [Oryza sativa ( 30.0 0.011 gi|71063878|gb|AAX49505.2| UDP-D-glucose epimerase 2 [Hordeum vu 38.5 0.013 gi|84873496|gb|ABC67799.1| UDP-D-xylose epimerase 3 [Hordeum vul 38.5 0.013 gi|115478551|ref|NP_001062869.1| Os09g0323000 [Oryza sativa (... 38.5 0.013 gi|115476144|ref|NP_001061668.1| Os08g0374800 [Oryza sativa (... 38.5 0.013 gi|11386775|sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEP... 38.5 0.013 gi|25553520|dbj|BAC24803.1| putative UDP-glucose 4-epimerase ... 38.5 0.013 gi|92898076|gb|ABE94041.1| UDP-glucose 4-epimerase [Medicago tru 38.1 0.017 gi|92898077|gb|ABE94042.1| UDP-glucose 4-epimerase [Medicago tru 38.1 0.017 gi|42407452|dbj|BAD10385.1| far-red impaired response-like pr... 38.1 0.017 gi|24417398|gb|AAN60309.1| unknown [Arabidopsis thaliana] 37.7 0.022 gi|28269460|gb|AAO38003.1| putative polyprotein [Oryza sativa... 37.7 0.022 gi|22329866|ref|NP_174350.2| MUR4 (MURUS 4); catalytic [Arabi... 37.7 0.022 gi|79356325|ref|NP_174461.2| DNA binding / DNA-directed RNA p... 29.3 0.023
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 426 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 509 Length of database: 101054579 Length adjustment: 105 Effective length of query: 404 Effective length of database: 71302934 Effective search space: 4563387776 Effective search space used: 4563387776 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)