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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168920983-22888-57376788187.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig77
Length=488


Distribution of 101 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|15222823|ref|NP_175998.1|  unknown protein [Arabidopsis tha...  83.6    3e-16 UniGene infoGene info
gi|15219270|ref|NP_178027.1|  unknown protein [Arabidopsis tha...  68.9    8e-12 UniGene infoGene info
gi|115469490|ref|NP_001058344.1|  Os06g0675200 [Oryza sativa (...  66.6    4e-11 Gene info
gi|27311593|gb|AAO00762.1|  unknown protein [Arabidopsis thaliana  65.9    7e-11 UniGene info
gi|15230654|ref|NP_187903.1|  unknown protein [Arabidopsis tha...  65.9    7e-11 UniGene infoGene info
gi|115444435|ref|NP_001045997.1|  Os02g0165500 [Oryza sativa (...  59.7    5e-09 Gene info
gi|77556569|gb|ABA99365.1|  hypothetical protein LOC_Os12g4166...  57.8    2e-08
gi|115479573|ref|NP_001063380.1|  Os09g0459200 [Oryza sativa (...  43.5    4e-04 Gene info
gi|18397426|ref|NP_566266.1|  unknown protein [Arabidopsis tha...  43.1    5e-04 UniGene infoGene info
gi|21536542|gb|AAM60874.1|  unknown [Arabidopsis thaliana]         42.7    6e-04 UniGene info
gi|15240098|ref|NP_201481.1|  unknown protein [Arabidopsis tha...  42.7    6e-04 UniGene infoGene info
gi|15221963|ref|NP_175310.1|  unknown protein [Arabidopsis tha...  40.4    0.003 UniGene infoGene info
gi|30687257|ref|NP_197435.2|  unknown protein [Arabidopsis tha...  38.9    0.009 UniGene infoGene info
gi|115476862|ref|NP_001062027.1|  Os08g0474100 [Oryza sativa (...  37.0    0.034 Gene info
gi|15230317|ref|NP_188551.1|  unknown protein [Arabidopsis tha...  36.2    0.059 UniGene infoGene info
gi|56202103|dbj|BAD73632.1|  putative ring finger protein 5 [O...  35.8    0.077
gi|15229617|ref|NP_188459.1|  unknown protein [Arabidopsis tha...  35.4    0.10  UniGene infoGene info
gi|15229817|ref|NP_190633.1|  unknown protein [Arabidopsis tha...  35.0    0.13  UniGene infoGene info
gi|115448851|ref|NP_001048205.1|  Os02g0762600 [Oryza sativa (...  34.7    0.17  Gene info
gi|55168105|gb|AAV43973.1|  hypothetical protein [Oryza sativa (j  33.9    0.29 
gi|28273358|gb|AAO38444.1|  hypothetical protein [Oryza sativa...  33.9    0.29  Gene info
gi|46805889|dbj|BAD17202.1|  hypothetical protein [Oryza sativa (  33.9    0.29  Gene info
gi|115467070|ref|NP_001057134.1|  Os06g0215100 [Oryza sativa (...  33.5    0.38  Gene info
gi|115441905|ref|NP_001045232.1|  Os01g0922100 [Oryza sativa (...  33.5    0.38  Gene info
gi|29244670|gb|AAO73263.1|  putative gag-pol polyprotein [Oryz...  33.5    0.38  Gene info
gi|115440909|ref|NP_001044734.1|  Os01g0836900 [Oryza sativa (...  33.1    0.50  Gene info
gi|77549283|gb|ABA92080.1|  retrotransposon protein, putative,...  32.7    0.65 
gi|115434346|ref|NP_001041931.1|  Os01g0132200 [Oryza sativa (...  32.3    0.85  Gene info
gi|53791270|dbj|BAD52475.1|  unknown protein [Oryza sativa (ja...  32.3    0.85  Gene info
gi|18408679|ref|NP_564888.1|  unknown protein [Arabidopsis tha...  32.0    1.1   UniGene infoGene info
gi|115444061|ref|NP_001045810.1|  Os02g0134200 [Oryza sativa (...  32.0    1.1   Gene info
gi|38346421|emb|CAD40208.2|  OSJNBa0019J05.6 [Oryza sativa (japon  31.6    1.4   Gene info
gi|115440831|ref|NP_001044695.1|  Os01g0830200 [Oryza sativa (...  31.6    1.4   Gene info
gi|77555076|gb|ABA97872.1|  retrotransposon protein, putative,...  31.6    1.4  
gi|115453701|ref|NP_001050451.1|  Os03g0439000 [Oryza sativa (...  31.2    1.9   Gene info
gi|40737007|gb|AAR89020.1|  hypothetical protein [Oryza sativa...  31.2    1.9   Gene info
gi|4455187|emb|CAB36719.1|  hypothetical protein [Arabidopsis ...  31.2    1.9  
gi|31431236|gb|AAP53044.1|  retrotransposon protein, putative,...  31.2    1.9   Gene info
gi|22329158|ref|NP_195168.2|  unknown protein [Arabidopsis thalia  31.2    1.9   UniGene infoGene info
gi|18657010|gb|AAL78097.1|AC093568_7  Putative polyprotein [Or...  31.2    1.9  
gi|51970964|dbj|BAD44174.1|  hypothetical protein [Arabidopsis th  31.2    1.9   UniGene info
gi|90399333|emb|CAH68342.1|  H0313F03.17 [Oryza sativa (indica cu  30.8    2.5  
gi|38344326|emb|CAD41742.2|  OSJNBa0058K23.8 [Oryza sativa (japon  30.8    2.5   Gene info
gi|38347263|emb|CAE05310.2|  OSJNBa0056L23.8 [Oryza sativa (japon  30.8    2.5   Gene info
gi|38346258|emb|CAE02080.2|  OSJNBa0074B10.8 [Oryza sativa (japon  30.8    2.5   Gene info
gi|78708045|gb|ABB47020.1|  retrotransposon protein, putative,...  30.8    2.5  
gi|115484193|ref|NP_001065758.1|  Os11g0150200 [Oryza sativa (...  30.8    2.5   Gene info
gi|116317769|emb|CAH65748.1|  OSIGBa0102B11.2 [Oryza sativa (indi  30.4    3.2  
gi|116317768|emb|CAH65747.1|  OSIGBa0102B11.1 [Oryza sativa (indi  30.4    3.2  
gi|116317830|emb|CAH65865.1|  OSIGBa0132I10.1 [Oryza sativa (indi  30.4    3.2  
gi|116308831|emb|CAH65969.1|  H0820C10.2 [Oryza sativa (indica cu  30.4    3.2  
gi|116309169|emb|CAH66267.1|  OSIGBa0136B09.3 [Oryza sativa (indi  30.4    3.2  
gi|116308877|emb|CAH66012.1|  OSIGBa0093M15.2 [Oryza sativa (indi  30.4    3.2  
gi|116308901|emb|CAH66033.1|  H0515C11.9 [Oryza sativa (indica cu  30.4    3.2  
gi|115485205|ref|NP_001067746.1|  Os11g0305400 [Oryza sativa (...  30.4    3.2   Gene info
gi|110288660|gb|ABB46832.2|  retrotransposon protein, putative...  30.4    3.2  
gi|110288811|gb|AAP52698.2|  retrotransposon protein, putative...  30.4    3.2  
gi|110288892|gb|ABG66013.1|  retrotransposon protein, putative...  30.4    3.2  
gi|110288626|gb|ABB46774.2|  retrotransposon protein, putative...  30.4    3.2  
gi|110288769|gb|ABG65971.1|  retrotransposon protein, putative...  30.4    3.2  
gi|108864281|gb|ABA93015.2|  retrotransposon protein, putative...  30.4    3.2  
gi|108863002|gb|ABA99486.2|  retrotransposon protein, putative...  30.4    3.2  
gi|108862586|gb|ABG22001.1|  retrotransposon protein, putative...  30.4    3.2  
gi|108862750|gb|ABA98741.2|  retrotransposon protein, putative...  30.4    3.2  
gi|108862342|gb|ABA96234.2|  retrotransposon protein, putative...  30.4    3.2  
gi|108862626|gb|ABA98029.2|  retrotransposon protein, putative...  30.4    3.2  
gi|62734491|gb|AAX96600.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|57834025|emb|CAI44621.1|  B1168G10.5 [Oryza sativa (japonica c  30.4    3.2  
gi|55168121|gb|AAV43988.1|  putative polyprotein [Oryza sativa (j  30.4    3.2  
gi|54287534|gb|AAV31278.1|  putative polyprotein [Oryza sativa (j  30.4    3.2  
gi|50838904|gb|AAT81665.1|  putative retrotransposon protein [...  30.4    3.2  
gi|50838937|gb|AAT81698.1|  putative retrotransposon protein, ...  30.4    3.2  
gi|46485886|gb|AAS98511.1|  putative polyprotein [Oryza sativa (j  30.4    3.2   Gene info
gi|41469587|gb|AAS07330.1|  putative polyprotein [Oryza sativa...  30.4    3.2   Gene info
gi|38346696|emb|CAE02181.2|  OSJNBa0080E14.12 [Oryza sativa (japo  30.4    3.2   Gene info
gi|78708216|gb|ABB47191.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77554505|gb|ABA97301.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77556709|gb|ABA99505.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555395|gb|ABA98191.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555470|gb|ABA98266.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77554975|gb|ABA97771.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555011|gb|ABA97807.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77553944|gb|ABA96740.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77556423|gb|ABA99219.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77554545|gb|ABA97341.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77553948|gb|ABA96744.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555297|gb|ABA98093.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555398|gb|ABA98194.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555312|gb|ABA98108.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77554249|gb|ABA97045.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77555577|gb|ABA98373.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77551562|gb|ABA94359.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77551513|gb|ABA94310.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77552426|gb|ABA95223.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77552307|gb|ABA95104.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|77552225|gb|ABA95022.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|62733790|gb|AAX95899.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|62734324|gb|AAX96433.1|  retrotransposon protein, putative,...  30.4    3.2  
gi|62733279|gb|AAX95396.1|  Reverse transcriptase (RNA-depende...  30.4    3.2  
gi|62733026|gb|AAX95143.1|  retrotransposon protein, putative,...  30.4    3.2  
Alignments
>gi|15222823|ref|NP_175998.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|6056382|gb|AAF02846.1|AC009894_17 Gene info Unknown protein [Arabidopsis thaliana] gi|8778317|gb|AAF79326.1|AC002304_19 Gene info F14J16.33 [Arabidopsis thaliana] gi|44681358|gb|AAS47619.1| UniGene infoGene info At1g56020 [Arabidopsis thaliana] gi|45773898|gb|AAS76753.1| UniGene infoGene info At1g56020 [Arabidopsis thaliana] Length=398 Score = 83.6 bits (205), Expect = 3e-16 Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 12/111 (10%) Frame = +3 Query 141 MASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVADDSPPASTAEKPEAEKPDLD 320 MASACV G +PE F SYGW SPR+S +R DD+ +S+ +K +++ L Sbjct 1 MASACVKSAGVSPEKF-------SSYGWTSPRMSLTR---DDNRRSSSVDKQQSDP--LP 48 Query 321 AAGKDLADFEFRLDDPVAMLPADELFSDGKLVPLXXXTARTVAELPAAAXN 473 + DFEF L+DPV ML ADELFSDGKLVPL +T + N Sbjct 49 EIQDPVVDFEFCLEDPVTMLSADELFSDGKLVPLKFSGPKTTTTTTSTTVN 99 >gi|15219270|ref|NP_178027.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|3152569|gb|AAC17050.1| Gene info Contains similarity to YELA protein gb|U63062 from Dictyostelium discoideum. [Arabidopsis thaliana] gi|48525341|gb|AAT44972.1| UniGene infoGene info At1g79060 [Arabidopsis thaliana] gi|50198942|gb|AAT70474.1| UniGene infoGene info At1g79060 [Arabidopsis thaliana] gi|110737422|dbj|BAF00655.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=396 Score = 68.9 bits (167), Expect = 8e-12 Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 15/93 (16%) Frame = +3 Query 141 MASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVADDSPPASTAEKPEAEKPDLD 320 MAS CVN+V T + F P+YG +PR SFSR+ S + +E P+ E Sbjct 1 MASVCVNNV-TVSQDF-------PTYGCFNPRASFSRDDGGRSSGSVASEIPKEET---- 48 Query 321 AAGKDLADFEFRLD-DPVAMLPADELFSDGKLV 416 A G DFEFRL+ DPV MLPADELFSDGKLV Sbjct 49 AVGA--GDFEFRLEEDPVGMLPADELFSDGKLV 79 >gi|115469490|ref|NP_001058344.1| Gene info Os06g0675200 [Oryza sativa (japonica cultivar-group)] gi|52077432|dbj|BAD46541.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113596384|dbj|BAF20258.1| Gene info Os06g0675200 [Oryza sativa (japonica cultivar-group)] Length=412 Score = 66.6 bits (161), Expect = 4e-11 Identities = 48/119 (40%), Positives = 59/119 (49%), Gaps = 18/119 (15%) Frame = +3 Query 141 MASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVAD----------DSPPASTAE 290 MASA +++ A + P GW PR+SFSR+ A SP A+ A Sbjct 1 MASAVASNLPAAAPAAV-----MPFGGWHGPRVSFSRDAAGAEEAAAVVVCSSPLAAAAA 55 Query 291 KPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFSDGKLVPLXXXTARTVAELPAAA 467 P+ A KD DFEF L MLPADELF+DGKL+PL A V E+ AAA Sbjct 56 VATTTTPE-PAISKDFIDFEFSLGGSATMLPADELFADGKLLPL--RKAAAVPEMDAAA 111 >gi|27311593|gb|AAO00762.1| UniGene info unknown protein [Arabidopsis thaliana] Length=381 Score = 65.9 bits (159), Expect = 7e-11 Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 25/94 (26%) Frame = +3 Query 141 MASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVADDSPPASTAEKPEAEKPDLD 320 MAS CV +VGT+P S+ W S ++S +RE + PA E P Sbjct 1 MASGCVKNVGTSP-----------SHSWTSSKMSLTRE-SQPLAPALENEDP-------- 40 Query 321 AAGKDLADFEFRLDDPVAMLPADELFSDGKLVPL 422 + DFEF L+DPV ML ADELFSDGKLVPL Sbjct 41 -----VDDFEFLLEDPVTMLSADELFSDGKLVPL 69 >gi|15230654|ref|NP_187903.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|15795127|dbj|BAB02505.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|59958296|gb|AAX12858.1| UniGene infoGene info At3g12970 [Arabidopsis thaliana] Length=381 Score = 65.9 bits (159), Expect = 7e-11 Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 25/94 (26%) Frame = +3 Query 141 MASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVADDSPPASTAEKPEAEKPDLD 320 MAS CV +VGT+P S+ W S ++S +RE + PA E P Sbjct 1 MASGCVKNVGTSP-----------SHSWTSSKMSLTRE-SQPLAPALENEDP-------- 40 Query 321 AAGKDLADFEFRLDDPVAMLPADELFSDGKLVPL 422 + DFEF L+DPV ML ADELFSDGKLVPL Sbjct 41 -----VDDFEFLLEDPVTMLSADELFSDGKLVPL 69 >gi|115444435|ref|NP_001045997.1| Gene info Os02g0165500 [Oryza sativa (japonica cultivar-group)] gi|49387734|dbj|BAD26222.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|49388420|dbj|BAD25553.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113535528|dbj|BAF07911.1| Gene info Os02g0165500 [Oryza sativa (japonica cultivar-group)] Length=406 Score = 59.7 bits (143), Expect = 5e-09 Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 13/76 (17%) Frame = +3 Query 198 PPACPSYGWLSP-RISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVA 374 PP S+GWL+P R+S PPA A AE+ A K+ DFEF L Sbjct 13 PPPAVSFGWLAPTRVS--------PPPALPAVAVAAEQ----AVSKEFIDFEFSLGGSAT 60 Query 375 MLPADELFSDGKLVPL 422 MLPADELF+DGKL+PL Sbjct 61 MLPADELFADGKLLPL 76 >gi|77556569|gb|ABA99365.1| hypothetical protein LOC_Os12g41660 [Oryza sativa (japonica cultivar-group)] Length=369 Score = 57.8 bits (138), Expect = 2e-08 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 8/68 (11%) Frame = +3 Query 222 WLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLD-DPVAMLPADELF 398 WLSPR+SFS DD+ + EA + AGK ADFEF L V+MLPADELF Sbjct 29 WLSPRVSFS---LDDAGGGGGVGRAEA----VAVAGKGSADFEFLLGCSAVSMLPADELF 81 Query 399 SDGKLVPL 422 S GKLVPL Sbjct 82 SGGKLVPL 89 >gi|115479573|ref|NP_001063380.1| Gene info Os09g0459200 [Oryza sativa (japonica cultivar-group)] gi|51535255|dbj|BAD38518.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|51536211|dbj|BAD38382.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113631613|dbj|BAF25294.1| Gene info Os09g0459200 [Oryza sativa (japonica cultivar-group)] Length=157 Score = 43.5 bits (101), Expect = 4e-04 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 9/70 (12%) Frame = +3 Query 213 SYGWLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADE 392 S +++PRISFS + A + PP P ++P + A G ADFEF + M+ AD+ Sbjct 16 SSSFMAPRISFSSDFALEPPP------PAQQQPAVRAPGD--ADFEFSVGSH-PMMAADQ 66 Query 393 LFSDGKLVPL 422 L S G+L+PL Sbjct 67 LISKGRLLPL 76 >gi|18397426|ref|NP_566266.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|6671959|gb|AAF23218.1|AC013454_5 Gene info unknown protein [Arabidopsis thaliana] gi|21617931|gb|AAM66981.1| UniGene infoGene info unknown [Arabidopsis thaliana] gi|89001041|gb|ABD59110.1| UniGene infoGene info At3g05980 [Arabidopsis thaliana] Length=245 Score = 43.1 bits (100), Expect = 5e-04 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 5/68 (7%) Frame = +3 Query 225 LSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDD---PVAMLPADEL 395 L PRISFS +++D P K D+ ++DFEF + P ML ADEL Sbjct 15 LGPRISFSSDLSDGGDFICIT--PVMCKEDVVKGSVKVSDFEFLSSENVSPQRMLTADEL 72 Query 396 FSDGKLVP 419 FS+GKL+P Sbjct 73 FSEGKLLP 80 >gi|21536542|gb|AAM60874.1| UniGene info unknown [Arabidopsis thaliana] Length=183 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 5/67 (7%) Frame = +3 Query 225 LSPRISFSREVADDSPPAS--TAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELF 398 +SPRISFS + + P + T P +++ ++ D +FEF + + M+PADELF Sbjct 17 MSPRISFSNDFVEIRPETTKTTRSSPLSKQEGSSSSFSD--NFEFSVSN-YTMMPADELF 73 Query 399 SDGKLVP 419 S GKL+P Sbjct 74 SKGKLLP 80 >gi|15240098|ref|NP_201481.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|9758130|dbj|BAB08622.1| Gene info unnamed protein product [Arabidopsis thaliana] Length=183 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 5/67 (7%) Frame = +3 Query 225 LSPRISFSREVADDSPPAS--TAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELF 398 +SPRISFS + + P + T P +++ ++ D +FEF + + M+PADELF Sbjct 17 MSPRISFSNDFVEIRPETTKTTRSSPLSKQEGSSSSFSD--NFEFSVSN-YTMMPADELF 73 Query 399 SDGKLVP 419 S GKL+P Sbjct 74 SKGKLLP 80 >gi|15221963|ref|NP_175310.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|12597824|gb|AAG60135.1|AC073555_19 Gene info hypothetical protein [Arabidopsis thaliana] Length=251 Score = 40.4 bits (93), Expect = 0.003 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +3 Query 234 RISFSREVAD-DSPPASTAEKPEAEKPDLDAAGKDLADFEFRLD---DPVAMLPADELFS 401 RISFS ++ D P E + D +DFEF + DP PADE+F+ Sbjct 9 RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68 Query 402 DGKLVPLXXXTARTV 446 DG ++P A TV Sbjct 69 DGMILPFHVTAASTV 83 >gi|30687257|ref|NP_197435.2| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|40823080|gb|AAR92257.1| UniGene infoGene info At5g19340 [Arabidopsis thaliana] gi|45752682|gb|AAS76239.1| UniGene infoGene info At5g19340 [Arabidopsis thaliana] gi|110738485|dbj|BAF01168.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=263 Score = 38.9 bits (89), Expect = 0.009 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Frame = +3 Query 231 PRISFSREVAD-DSPPASTAEKPEAE----KPDLDAAGKDLADFEFRLDDPVAMLPADEL 395 PRISFS +++ DS P + + D + DFEF L + ML ADEL Sbjct 19 PRISFSADLSSSDSDGDFICINPVMNLIVGREEKDKSSVKAGDFEF-LSENATMLSADEL 77 Query 396 FSDGKLVP 419 FS+GKL+P Sbjct 78 FSEGKLLP 85 >gi|115476862|ref|NP_001062027.1| Gene info Os08g0474100 [Oryza sativa (japonica cultivar-group)] gi|42408201|dbj|BAD09337.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|113623996|dbj|BAF23941.1| Gene info Os08g0474100 [Oryza sativa (japonica cultivar-group)] Length=160 Score = 37.0 bits (84), Expect = 0.034 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 9/64 (14%) Frame = +3 Query 231 PRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFSDGK 410 PR+SFS + A + PP + P + G ADFEF M+ AD+LFS G+ Sbjct 20 PRMSFSSDFALEPPPPPSG-------PGRASMGD--ADFEFSAVGSRPMITADQLFSKGR 70 Query 411 LVPL 422 ++P+ Sbjct 71 ILPM 74 >gi|15230317|ref|NP_188551.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|9294623|dbj|BAB02962.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|61742707|gb|AAX55174.1| UniGene infoGene info hypothetical protein At3g19200 [Arabidopsis thaliana] Length=143 Score = 36.2 bits (82), Expect = 0.059 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = +3 Query 222 WLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFS 401 ++ RISFS + AD S TA + + + +A +DF+F +++ ADE+F Sbjct 14 FVDARISFSNDFAD-SDSKHTASRADGQMKYKEAPVS--SDFKFNVENFGFTSAADEIFF 70 Query 402 DGKLVPLXXXTARTVAEL 455 G L+PL T R V L Sbjct 71 GGVLLPLEKTTQRKVTTL 88 >gi|56202103|dbj|BAD73632.1| putative ring finger protein 5 [Oryza sativa (japonica cultivar-group)] gi|56785168|dbj|BAD81844.1| putative ring finger protein 5 [Oryza sativa (japonica cultivar-group)] Length=561 Score = 35.8 bits (81), Expect = 0.077 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Frame = +3 Query 135 PMMASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVAD-DSPPASTAEKPEAEKP 311 P ++A V+ PE L PP PS+ LSP + + + D PPAS P P Sbjct 46 PSSSAASVDAPPPPPE--LSHPPYSPSHADLSPPLQEVYSLYNPDDPPASETHLPPYAPP 103 Query 312 DLDAAGKDLADFEFRLDDPVAMLPADEL 395 + D EF L P ++ A EL Sbjct 104 PAPVVSELPDDLEFGLHPPPPLVRASEL 131 >gi|15229617|ref|NP_188459.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|11994093|dbj|BAB01096.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|49660169|gb|AAT68375.1| UniGene infoGene info hypothetical protein At3g18300 [Arabidopsis thaliana] gi|49660171|gb|AAT68376.1| UniGene infoGene info hypothetical protein At3g18300 [Arabidopsis thaliana] gi|55740629|gb|AAV63907.1| Gene info hypothetical protein At3g18300 [Arabidopsis thaliana] Length=274 Score = 35.4 bits (80), Expect = 0.10 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Frame = +3 Query 234 RISFSREVADDSPPASTAEKPEAE-KPDLDAAGKDLADFEFRLD---DPVAMLPADELFS 401 R SF+ ++ ++P + D +DFEF + DP PADE+F+ Sbjct 10 RFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFA 69 Query 402 DGKLVPLXXXTARTVAELP 458 DG ++P+ + +P Sbjct 70 DGMILPVLPFQVTATSTMP 88 >gi|15229817|ref|NP_190633.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|6561967|emb|CAB62433.1| Gene info putative protein [Arabidopsis thaliana] gi|28466849|gb|AAO44033.1| UniGene infoGene info At3g50640 [Arabidopsis thaliana] gi|110736444|dbj|BAF00190.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=166 Score = 35.0 bits (79), Expect = 0.13 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%) Frame = +3 Query 234 RISFSREVADDSPPASTAEKPEAEKPDLDAAGK---DLADFEFRLDDPVAMLPADELFSD 404 RISFS E + +EK A+ ++++ ADF F + D +M+PADE+F Sbjct 15 RISFSNEFVE-----IRSEKSNAKSNNINSRSSFSMPSADFAFSVTD-YSMIPADEIFLK 68 Query 405 GKLVP 419 GK++P Sbjct 69 GKILP 73 >gi|115448851|ref|NP_001048205.1| Gene info Os02g0762600 [Oryza sativa (japonica cultivar-group)] gi|46805902|dbj|BAD17215.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113537736|dbj|BAF10119.1| Gene info Os02g0762600 [Oryza sativa (japonica cultivar-group)] Length=153 Score = 34.7 bits (78), Expect = 0.17 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 17/77 (22%) Frame = +3 Query 198 PPACPSYGWLSPRISFSREVADDSPPA--STAEKPEAEKPDLDAAGKDLADFEFRLDDPV 371 PPA L PRISFS + + PP + A ++ D++ FEF + Sbjct 20 PPA------LGPRISFSSDFVVEPPPPVQNRAMNLRCQEEDIN--------FEFSVGSH- 64 Query 372 AMLPADELFSDGKLVPL 422 M+ AD+LFS G+++PL Sbjct 65 PMMAADQLFSKGRILPL 81 >gi|55168105|gb|AAV43973.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=846 Score = 33.9 bits (76), Expect = 0.29 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 0/52 (0%) Frame = -2 Query 196 QSRNASGVVPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 + +GV P + DAI+ + D PG + D + FWW S+ R Sbjct 398 EDEQGTGVTPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 449 >gi|28273358|gb|AAO38444.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|108710576|gb|ABF98371.1| hypothetical protein LOC_Os03g49160 [Oryza sativa (japonica cultivar-group)] Length=206 Score = 33.9 bits (76), Expect = 0.29 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Frame = +3 Query 294 PEAEKPDLDAAGKDLADFEFRLDDPVA---MLPADELFSDGKLVPLXXXTARTVAEL 455 P ++ D + AG D D +F PV+ ++PAD++F+ G++VP R +L Sbjct 55 PASDVGDAEGAGSDF-DLDFAFAPPVSAAKLVPADDIFAHGRIVPAYPVFDRNFLDL 110 >gi|46805889|dbj|BAD17202.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=430 Score = 33.9 bits (76), Expect = 0.29 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 17/81 (20%) Frame = +3 Query 231 PRISFSREVADDSPPASTAEKPEAEKPDLDAA------------GKDLADFEF--RLDDP 368 PR S+S A + P EKP KP + A D ADF+F LD Sbjct 131 PRASYSSGTATSTVPFDWEEKPGKPKPKSELATCAAAATSANVGEVDDADFDFGVLLDKS 190 Query 369 V---AMLPADELFSDGKLVPL 422 V + ADELF GK+ PL Sbjct 191 VQVPELTTADELFDKGKIRPL 211 >gi|115467070|ref|NP_001057134.1| Gene info Os06g0215100 [Oryza sativa (japonica cultivar-group)] gi|113595174|dbj|BAF19048.1| Gene info Os06g0215100 [Oryza sativa (japonica cultivar-group)] Length=428 Score = 33.5 bits (75), Expect = 0.38 Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Frame = +3 Query 231 PRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLA---DFEF-RLDDPVA----MLPA 386 PR S++ V S P E+P K L G A DFEF + D A + A Sbjct 138 PRASYT--VNASSVPFDWEERPGTPKAGLGGGGGGAAWDTDFEFGTVVDKAAPEENLTTA 195 Query 387 DELFSDGKLVPLXXXTARTVAEL 455 DELF GK+ PL +T EL Sbjct 196 DELFEKGKIRPLKAPLPKTADEL 218 >gi|115441905|ref|NP_001045232.1| Gene info Os01g0922100 [Oryza sativa (japonica cultivar-group)] gi|57899441|dbj|BAD88379.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113534763|dbj|BAF07146.1| Gene info Os01g0922100 [Oryza sativa (japonica cultivar-group)] Length=418 Score = 33.5 bits (75), Expect = 0.38 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Frame = +3 Query 198 PPACPSYGWLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAM 377 PP P G + + + SP AS PE E GK+ + F+ A+ Sbjct 15 PPPQPECGAAAAVVGGEPGWSSPSPAAS----PEFE---FWMVGKNPSSFQ-----SPAL 62 Query 378 LPADELFSDGKLVPLXXXTARTVAELPAAAXNG 476 L ADELFSDG ++PL RT+ ++P+ +G Sbjct 63 LTADELFSDGIVLPL-----RTLQQVPSGEGDG 90 >gi|29244670|gb|AAO73263.1| Gene info putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|108709213|gb|ABF97008.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] Length=1652 Score = 33.5 bits (75), Expect = 0.38 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D + GFWW S+ R Sbjct 1212 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKEGFWWASMKR 1255 >gi|115440909|ref|NP_001044734.1| Gene info Os01g0836900 [Oryza sativa (japonica cultivar-group)] gi|56201951|dbj|BAD73401.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113534265|dbj|BAF06648.1| Gene info Os01g0836900 [Oryza sativa (japonica cultivar-group)] Length=364 Score = 33.1 bits (74), Expect = 0.50 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Frame = +3 Query 321 AAGKDLADFEFRLDDPV-----AMLPADELFSDGKLVPLXXXTARTVAE--LPAAAXNG 476 A+ ++ +FEF + PV A PADELF GKL+PL + E L +AA G Sbjct 49 ASPQNSREFEFHMSAPVDKWEPAASPADELFYKGKLLPLHLPPRIQMVEKLLESAAEKG 107 >gi|77549283|gb|ABA92080.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] Length=1529 Score = 32.7 bits (73), Expect = 0.65 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D GFWW S+ R Sbjct 1150 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLNEGFWWASMKR 1193 >gi|115434346|ref|NP_001041931.1| Gene info Os01g0132200 [Oryza sativa (japonica cultivar-group)] gi|113531462|dbj|BAF03845.1| Gene info Os01g0132200 [Oryza sativa (japonica cultivar-group)] Length=262 Score = 32.3 bits (72), Expect = 0.85 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = +3 Query 225 LSPRISFSRE-VADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVA--MLPADEL 395 + PRISFS + V + A+ A + + + ++ + L + EF + A + PAD L Sbjct 30 IGPRISFSHDGVVATAGAATPAARSDTSLVVVMSSWRRLPEPEFDFANAAAADVAPADRL 89 Query 396 FSDGKLVPL 422 F+ GKL+P+ Sbjct 90 FAGGKLLPV 98 >gi|53791270|dbj|BAD52475.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|53792157|dbj|BAD52790.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] Length=241 Score = 32.3 bits (72), Expect = 0.85 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = +3 Query 225 LSPRISFSRE-VADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVA--MLPADEL 395 + PRISFS + V + A+ A + + + ++ + L + EF + A + PAD L Sbjct 9 IGPRISFSHDGVVATAGAATPAARSDTSLVVVMSSWRRLPEPEFDFANAAAADVAPADRL 68 Query 396 FSDGKLVPL 422 F+ GKL+P+ Sbjct 69 FAGGKLLPV 77 >gi|18408679|ref|NP_564888.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|9755454|gb|AAF98215.1|AC007152_11 Gene info Unknown protein [Arabidopsis thaliana] gi|20260172|gb|AAM12984.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|21537236|gb|AAM61577.1| UniGene infoGene info unknown [Arabidopsis thaliana] gi|22136262|gb|AAM91209.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=264 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Frame = +3 Query 225 LSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPV--------AML 380 +SPRISFSR+ S ++P ++ DF+F + V Sbjct 12 MSPRISFSRDFCQ-SDAIPIEKRPLRSSNSKPSSLNSSIDFDFCIPGGVNSGESFDQGSW 70 Query 381 PADELFSDGKLVP 419 ADELFS+GK++P Sbjct 71 SADELFSNGKILP 83 >gi|115444061|ref|NP_001045810.1| Gene info Os02g0134200 [Oryza sativa (japonica cultivar-group)] gi|41052613|dbj|BAD08005.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|42408827|dbj|BAD10087.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|113535341|dbj|BAF07724.1| Gene info Os02g0134200 [Oryza sativa (japonica cultivar-group)] Length=255 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Frame = +3 Query 261 DDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAML-PADELFSDGKLVPLXXXTA 437 D++ PAS + D + AG DL DF F A L PAD++F+ G++VP Sbjct 34 DEATPASV------DVGDAEGAGLDL-DFAFAPPVSAAELAPADDIFAHGRIVPAYPVFD 86 Query 438 RTVAEL 455 R++ +L Sbjct 87 RSLLDL 92 >gi|38346421|emb|CAD40208.2| Gene info OSJNBa0019J05.6 [Oryza sativa (japonica cultivar-group)] Length=1616 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D R FWW S+ R Sbjct 1176 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLRERFWWASMKR 1219 >gi|115440831|ref|NP_001044695.1| Gene info Os01g0830200 [Oryza sativa (japonica cultivar-group)] gi|113534226|dbj|BAF06609.1| Gene info Os01g0830200 [Oryza sativa (japonica cultivar-group)] Length=300 Score = 31.6 bits (70), Expect = 1.4 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Frame = +3 Query 135 PMMASACVNDVGTTPEAFLDCPPACPSYGWLSPRISFSREVAD-DSPPASTAEKPEAEKP 311 P ++A V+ PE L PP PS+ LSP + + + D PPAS P P Sbjct 46 PSSSAASVDAPPPPPE--LSHPPYSPSHADLSPPLQEVYSLYNPDDPPASETHLPPYAPP 103 Query 312 DLDAAGKDLADFEFRLDDP 368 + D EF L P Sbjct 104 PAPVVSELPDDLEFGLHPP 122 >gi|77555076|gb|ABA97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] Length=923 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP S DAI+ + D PG + D + FWW S+ R Sbjct 679 VPESKELKDAILKEAHDTLYSIHPGSTKMYQDLKEKFWWASMKR 722 >gi|115453701|ref|NP_001050451.1| Gene info Os03g0439000 [Oryza sativa (japonica cultivar-group)] gi|113548922|dbj|BAF12365.1| Gene info Os03g0439000 [Oryza sativa (japonica cultivar-group)] Length=315 Score = 31.2 bits (69), Expect = 1.9 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +3 Query 258 ADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFSDGKLVPLXXXTA 437 A DS + + E E L + G LA D M ADE+FSDGKL+PL +A Sbjct 12 ATDSSTSVSVAPEEFEFFVLPSGGLALAGA-----DEDGMCVADEVFSDGKLLPLRLSSA 66 Query 438 RTV 446 V Sbjct 67 NPV 69 >gi|40737007|gb|AAR89020.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|108709035|gb|ABF96830.1| expressed protein [Oryza sativa (japonica cultivar-group)] Length=320 Score = 31.2 bits (69), Expect = 1.9 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = +3 Query 258 ADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFSDGKLVPLXXXTA 437 A DS + + E E L + G LA D M ADE+FSDGKL+PL +A Sbjct 17 ATDSSTSVSVAPEEFEFFVLPSGGLALAGA-----DEDGMCVADEVFSDGKLLPLRLSSA 71 Query 438 RTV 446 V Sbjct 72 NPV 74 >gi|4455187|emb|CAB36719.1| hypothetical protein [Arabidopsis thaliana] gi|7270392|emb|CAB80159.1| hypothetical protein [Arabidopsis thaliana] Length=403 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 11/67 (16%) Frame = +3 Query 222 WLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFS 401 + PRISFS A A K E K D DFEF +++ +M ADE+F Sbjct 10 YAEPRISFSSGFA--------ATKHEMIKYKEAPVSSD--DFEFGVEN-FSMTTADEIFF 58 Query 402 DGKLVPL 422 DG ++PL Sbjct 59 DGMILPL 65 >gi|31431236|gb|AAP53044.1| Gene info retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] Length=1094 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D + FWW S+ R Sbjct 1033 VPENKDLKDAILNEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1076 >gi|22329158|ref|NP_195168.2| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=491 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 11/67 (16%) Frame = +3 Query 222 WLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFS 401 + PRISFS A A K E K D DFEF +++ +M ADE+F Sbjct 15 YAEPRISFSSGFA--------ATKHEMIKYKEAPVSSD--DFEFGVEN-FSMTTADEIFF 63 Query 402 DGKLVPL 422 DG ++PL Sbjct 64 DGMILPL 70 >gi|18657010|gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|31430586|gb|AAP52480.1| Gene info retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] Length=1473 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D ++ FWW S+ R Sbjct 1033 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKKRFWWASMKR 1076 >gi|51970964|dbj|BAD44174.1| UniGene info hypothetical protein [Arabidopsis thaliana] Length=129 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 11/67 (16%) Frame = +3 Query 222 WLSPRISFSREVADDSPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVAMLPADELFS 401 + PRISFS A A K E K D DFEF +++ +M ADE+F Sbjct 15 YAEPRISFSSGFA--------ATKHEMIKYKEAPVSSD--DFEFGVEN-FSMTTADEIFF 63 Query 402 DGKLVPL 422 DG ++PL Sbjct 64 DGMILPL 70 >gi|90399333|emb|CAH68342.1| H0313F03.17 [Oryza sativa (indica cultivar-group)] Length=340 Score = 30.8 bits (68), Expect = 2.5 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +3 Query 267 SPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVA---MLPADELFSDGKLVPL 422 SP A +P +P L D D EF P A + ADELFS G+LVP+ Sbjct 8 SPEPPFAFRPA--RPPLPPLLDDEEDGEFEFSVPAAAAVLSAADELFSGGRLVPM 60 >gi|38344326|emb|CAD41742.2| Gene info OSJNBa0058K23.8 [Oryza sativa (japonica cultivar-group)] Length=339 Score = 30.8 bits (68), Expect = 2.5 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +3 Query 267 SPPASTAEKPEAEKPDLDAAGKDLADFEFRLDDPVA---MLPADELFSDGKLVPL 422 SP A +P +P L D D EF P A + ADELFS G+LVP+ Sbjct 8 SPEPPFAFRPA--RPPLPPLLDDEEDGEFEFSVPAAAAVLSAADELFSGGRLVPM 60 >gi|38347263|emb|CAE05310.2| Gene info OSJNBa0056L23.8 [Oryza sativa (japonica cultivar-group)] Length=1472 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + +D PG + D + FWW S+ R Sbjct 1032 VPDNKDLKDAILKEARDTLYSIHPGSTKMYQDLKERFWWASMKR 1075 >gi|38346258|emb|CAE02080.2| Gene info OSJNBa0074B10.8 [Oryza sativa (japonica cultivar-group)] Length=400 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D ++ FWW S+ R Sbjct 186 VPDNKDLNDAILKEAHDTLYSIHPGSTKMYQDLKKRFWWASMKR 229 >gi|78708045|gb|ABB47020.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa (japonica cultivar-group)] Length=989 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D + FWW S+ R Sbjct 763 VPDNKNLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 806 >gi|115484193|ref|NP_001065758.1| Gene info Os11g0150200 [Oryza sativa (japonica cultivar-group)] gi|62701685|gb|AAX92758.1| Gene info hypothetical protein LOC_Os11g05280 [Oryza sativa (japonica cultivar-group)] gi|77548705|gb|ABA91502.1| Gene info hypothetical protein LOC_Os11g05280 [Oryza sativa (japonica cultivar-group)] gi|113644462|dbj|BAF27603.1| Gene info Os11g0150200 [Oryza sativa (japonica cultivar-group)] Length=338 Score = 30.8 bits (68), Expect = 2.5 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 0/39 (0%) Frame = -3 Query 144 PSSVIIKMRRWDGVRGEPADFSIGDEDFGGNPY*GSTRP 28 P++ I++RR G R P+ S GDE+ GG G+T P Sbjct 98 PTARAIQLRRRRGSRSLPSGSSSGDENGGGGDESGTTTP 136 >gi|116317769|emb|CAH65748.1| OSIGBa0102B11.2 [Oryza sativa (indica cultivar-group)] Length=684 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D + FWW S+ R Sbjct 244 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 287 >gi|116317768|emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa (indica cultivar-group)] Length=1601 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D + FWW S+ R Sbjct 1161 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1204 >gi|116317830|emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa (indica cultivar-group)] Length=1670 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Frame = -2 Query 172 VPTSLTQADAIIGDHQDEEMGRSPGGAGRFLDRRRGFWWESLLR 41 VP + DAI+ + D PG + D + FWW S+ R Sbjct 1230 VPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKR 1273
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 292
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 488
Length of database: 101054579
Length adjustment: 104
Effective length of query: 384
Effective length of database: 71586283
Effective search space: 4152004414
Effective search space used: 4152004414
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)