Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168921325-30245-179506575566.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig83 Length=435
Score E Sequences producing significant alignments: (Bits) Value gi|102139977|gb|ABF70112.1| chlorophyll A-B binding protein (... 231 7e-61 gi|94404555|gb|ABF17940.1| putative chloroplast chlorophyll a... 228 8e-60 gi|87621681|gb|ABD38707.1| chloroplast chlorophyll a/b bindin... 226 2e-59 gi|2196772|gb|AAB61237.1| chlorophyll a/b-binding protein [Mesem 224 7e-59 gi|115780|sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protei... 224 9e-59 gi|2196770|gb|AAB61236.1| chlorophyll a/b-binding protein [Mesem 221 7e-58 gi|2196774|gb|AAB61238.1| chlorophyll a/b-binding protein [Mesem 221 7e-58 gi|168296|gb|AAA33396.1| light-harvesting chlorophyll a/b protei 219 3e-57 gi|693918|gb|AAA80592.1| chlorophyll a/b binding protein 218 5e-57 gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (... 218 6e-57 gi|693914|gb|AAA80589.1| chlorophyll a/b binding protein 218 6e-57 gi|224927|prf||1204205B protein 1B,chlorophyll binding 218 6e-57 gi|115819|sp|P07370|CB2B_LYCES Chlorophyll a-b binding protei... 218 6e-57 gi|115810|sp|P27496|CB25_TOBAC Chlorophyll a-b binding protei... 218 8e-57 gi|3036951|dbj|BAA25394.1| light harvesting chlorophyll a/b-b... 218 8e-57 gi|693924|gb|AAA80595.1| chlorophyll a/b binding protein 217 1e-56 gi|3036944|dbj|BAA25389.1| light harvesting chlorophyll a/b-b... 217 1e-56 gi|81074613|gb|ABB55370.1| chlorophyll a-b binding protein 3C-li 217 1e-56 gi|693922|gb|AAA80594.1| chlorophyll a/b binding protein 217 1e-56 gi|693916|gb|AAA80591.1| chlorophyll a/b binding protein 217 1e-56 gi|115805|sp|P27495|CB24_TOBAC Chlorophyll a-b binding protei... 217 1e-56 gi|3036948|dbj|BAA25392.1| light harvesting chlorophyll a/b-b... 217 1e-56 gi|47026851|gb|AAT08651.1| chloroplast chlorophyll A-B bindin... 216 2e-56 gi|3036946|dbj|BAA25391.1| light harvesting chlorophyll a/b-b... 216 2e-56 gi|693920|gb|AAA80593.1| chlorophyll a/b binding protein 216 3e-56 gi|115808|sp|P04783|CB25_PETSP Chlorophyll a-b binding protei... 216 3e-56 gi|115795|sp|P12469|CB23_NICPL Chlorophyll a-b binding protei... 215 4e-56 gi|115792|sp|P27493|CB22_TOBAC Chlorophyll a-b binding protei... 215 4e-56 gi|3036953|dbj|BAA25395.1| light harvesting chlorophyll a/b-b... 215 5e-56 gi|115812|sp|P27491|CB27_TOBAC Chlorophyll a-b binding protei... 215 5e-56 gi|3036955|dbj|BAA25396.1| light harvesting chlorophyll a/b-b... 214 7e-56 gi|3036945|dbj|BAA25390.1| light harvesting chlorophyll a/b-b... 214 9e-56 gi|170404|gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C 213 2e-55 gi|115825|sp|P07369|CB2G_LYCES Chlorophyll a-b binding protei... 213 2e-55 gi|3036942|dbj|BAA25388.1| light harvesting chlorophyll a/b-b... 213 3e-55 gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-bindin 212 3e-55 gi|115789|sp|P04780|CB22_PETSP Chlorophyll a-b binding protei... 211 6e-55 gi|115807|sp|P12470|CB25_NICPL Chlorophyll a-b binding protei... 211 8e-55 gi|115781|sp|P27492|CB21_TOBAC Chlorophyll a-b binding protei... 211 8e-55 gi|47026947|gb|AAT08694.1| chloroplast chlorophyll A-B bindin... 210 1e-54 gi|14423661|sp|P92919|CB23_APIGR Chlorophyll a-b binding prot... 210 1e-54 gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding pro 210 2e-54 gi|115778|sp|P13851|CB21_SINAL Chlorophyll a-b binding protei... 210 2e-54 gi|115798|sp|P04781|CB23_PETSP Chlorophyll a-b binding protei... 209 3e-54 gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding 208 6e-54 gi|3036949|dbj|BAA25393.1| light harvesting chlorophyll a/b-b... 207 8e-54 gi|115804|sp|P04782|CB24_PETSP Chlorophyll a-b binding protei... 206 2e-53 gi|21419|emb|CAA78379.1| chlorophyll a/b-binding protein PS I... 206 3e-53 gi|2804572|dbj|BAA24493.1| chlorophyll a/b-binding protein [Fagu 205 4e-53 gi|21592428|gb|AAM64379.1| putative photosystem II type I chl... 204 7e-53 gi|13265505|gb|AAG40044.2|AF324693_1 At2g34430 [Arabidopsis thal 204 7e-53 gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of ... 204 7e-53 gi|4512125|gb|AAD21625.1| putative chlorophyll a/b-binding pr... 204 7e-53 gi|18403549|ref|NP_565787.1| LHB1B1; chlorophyll binding [Ara... 204 7e-53 gi|289920|gb|AAA18529.1| chlorophyll A/B binding protein 204 1e-52 gi|73665920|gb|AAZ79657.1| putative chlorophyll a/b-binding prot 204 1e-52 gi|15220615|ref|NP_174286.1| CAB1 (CHLOROPHYLL A/B BINDING PR... 204 1e-52 gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Bras 203 2e-52 gi|217944|dbj|BAA03104.1| light-harvesting chlorophyll a/b-bi... 202 4e-52 gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [A... 202 5e-52 gi|18397286|ref|NP_564339.1| CAB3 (CHLOROPHYLL A/B BINDING PR... 202 5e-52 gi|115800|sp|P09756|CB23_SOYBN Chlorophyll a-b binding protei... 201 6e-52 gi|115774|sp|P04779|CB21_PETSP Chlorophyll a-b binding protei... 201 1e-51 gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding prot 200 1e-51 gi|30686051|ref|NP_850231.1| LHB1B2 [Arabidopsis thaliana] 200 1e-51 gi|18403546|ref|NP_565786.1| LHB1B2; chlorophyll binding [Ara... 200 1e-51 gi|506629|gb|AAA50172.1| photosystem II type I chlorophyll a/b-b 199 2e-51 gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cice 199 2e-51 gi|9587205|gb|AAF89206.1|AF279249_1 LHCII type I chlorophyll a/b 199 3e-51 gi|3293555|gb|AAC25775.1| chlorophyll a/b binding protein [Medic 199 3e-51 gi|28630973|gb|AAO45885.1| chlorophyll a/b-binding protein precu 199 4e-51 gi|115438250|ref|NP_001043493.1| Os01g0600900 [Oryza sativa (... 198 5e-51 gi|1657859|gb|AAB18209.1| chlorophyll a/b-binding protein WCA... 197 1e-50 gi|9587207|gb|AAF89207.1|AF279250_1 LHCII type I chlorophyll a/b 197 1e-50 gi|115782|sp|P04784|CB21_WHEAT Chlorophyll a-b binding protei... 196 2e-50 gi|1053216|gb|AAA80688.1| chlorophyll a/b-binding protein 196 3e-50 gi|115771|sp|P12329|CB21_MAIZE Chlorophyll a-b binding protei... 195 4e-50 gi|38096045|gb|AAR10886.1| chlorophyll a/b binding protein [Trif 195 6e-50 gi|47026888|gb|AAT08668.1| chloroplast chlorophyll A-B bindin... 194 1e-49 gi|115786|sp|P06671|CB22_MAIZE Chlorophyll a-b binding protei... 193 2e-49 gi|92890755|gb|ABE90474.1| Chlorophyll A-B binding protein [Medi 192 4e-49 gi|56809379|gb|AAW31511.1| light-harvesting chlorophyll-a/b b... 192 4e-49 gi|8954293|gb|AAD27879.2|AF139467_1 LHCII type I chlorophyll a/b 192 4e-49 gi|115439621|ref|NP_001044090.1| Os01g0720500 [Oryza sativa (... 192 5e-49 gi|115788|sp|P07371|CB22_PEA Chlorophyll a-b binding protein ... 192 5e-49 gi|115768|sp|P08221|CB21_CUCSA Chlorophyll a-b binding protei... 191 6e-49 gi|115785|sp|P08963|CB22_HORVU Chlorophyll a-b binding protei... 190 2e-48 gi|115815|sp|P27497|CB29_MAIZE Chlorophyll a-b binding protei... 189 2e-48 gi|1661160|gb|AAB18404.1| chlorophyll a/b binding protein [Oryza 189 4e-48 gi|974850|emb|CAA61432.1| LHCII type I protein [Hordeum vulgare 189 4e-48 gi|20182|emb|CAA32109.1| chlorophyll a/b-binding preprotein (... 188 7e-48 gi|62176932|emb|CAG25596.1| putative chlorophyll a/b binding ... 187 9e-48 gi|22230|emb|CAA37474.1| light harvesting chlorophyll a /b bindi 186 3e-47 gi|115814|sp|P27490|CB28_PEA Chlorophyll a-b binding protein ... 185 4e-47 gi|115478691|ref|NP_001062939.1| Os09g0346500 [Oryza sativa (... 185 6e-47 gi|218172|dbj|BAA00536.1| type I light-harvesting chlorophyll... 184 1e-46 gi|543938|sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protei... 181 6e-46 gi|20178|emb|CAA32108.1| chlorophyll a/b-binding preprotein (... 180 1e-45 gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding ... 180 2e-45 gi|349443|gb|AAA60965.1| light-harvesting chlorophyll a/b bin... 177 2e-44
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 317 Number of extensions: 10 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 435 Length of database: 101054579 Length adjustment: 102 Effective length of query: 333 Effective length of database: 72152981 Effective search space: 3102578183 Effective search space used: 3102578183 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)