Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168921819-24085-52190779579.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig4 Length=332
Score E Sequences producing significant alignments: (Bits) Value gi|66775524|gb|AAY56337.1| elongation factor-1 alpha [Musa acumi 163 1e-40 gi|48527431|gb|AAT45847.1| elongation factor 1-alpha 1 [Elaeis g 163 1e-40 gi|18419676|gb|AAL69396.1| elongation factor 1-alpha [Elaeis ole 163 1e-40 gi|61741088|gb|AAX54511.1| elongation factor 1 alpha [Actinidia 163 1e-40 gi|5917747|gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 163 1e-40 gi|8778823|gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thalian 163 1e-40 gi|5917745|gb|AAD56019.1|AF181491_1 elongation factor-1 alpha 2 163 1e-40 gi|74486740|gb|ABA12223.1| translation elongation factor 1A-7 [G 163 1e-40 gi|74486728|gb|ABA12217.1| translation elongation factor 1A-1 [G 163 1e-40 gi|74486736|gb|ABA12221.1| translation elongation factor 1A-5 [G 163 1e-40 gi|74486742|gb|ABA12224.1| translation elongation factor 1A-8 [G 163 1e-40 gi|74486734|gb|ABA12220.1| translation elongation factor 1A-4 [G 163 1e-40 gi|74486744|gb|ABA12225.1| translation elongation factor 1A-9 [G 163 1e-40 gi|74486732|gb|ABA12219.1| translation elongation factor 1A-3 [G 163 1e-40 gi|4680249|gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1; 163 1e-40 gi|3869088|dbj|BAA34348.1| elongation factor-1 alpha [Nicotiana 163 1e-40 gi|232029|sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha (EF... 163 1e-40 gi|3122060|sp|O24534|EF1A_VICFA Elongation factor 1-alpha (EF... 163 1e-40 gi|6015058|sp|O49169|EF1A_MANES Elongation factor 1-alpha (EF... 163 1e-40 gi|24371055|dbj|BAC22125.1| eukaryotic elongation factor 1A [Bru 163 2e-40 gi|74486738|gb|ABA12222.1| translation elongation factor 1A-6 [G 162 3e-40 gi|108706480|gb|ABF94275.1| Elongation factor 1-alpha, putati... 162 4e-40 gi|18873725|gb|AAL79774.1|AF331849_1 elongation factor 1 alpha [ 162 4e-40 gi|2996096|gb|AAC15413.1| translation elongation factor-1 alp... 162 4e-40 gi|2282584|gb|AAB64207.1| elongation factor 1-alpha [Zea mays] 162 4e-40 gi|74486730|gb|ABA12218.1| translation elongation factor 1A-2 [G 162 4e-40 gi|115451089|ref|NP_001049145.1| Os03g0177400 [Oryza sativa (... 162 4e-40 gi|3122071|sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha (EF... 162 4e-40 gi|399414|sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha (EF-... 162 4e-40 gi|2662343|dbj|BAA23658.1| EF-1 alpha [Oryza sativa] 162 4e-40 gi|89276321|gb|ABD66517.1| EF-1 alpha [Gymnadenia conopsea] 161 6e-40 gi|4138179|emb|CAA11705.1| elongation factor 1 alpha subunit [Ma 161 6e-40 gi|23397097|gb|AAN31833.1| putative translation elongation fa... 161 6e-40 gi|13430510|gb|AAK25877.1|AF360167_1 putative translation elo... 161 6e-40 gi|18086389|gb|AAL57653.1| At1g07930/T6D22_3 [Arabidopsis thalia 161 6e-40 gi|17064954|gb|AAL32631.1| putative elongation factor 1-a [Ar... 161 6e-40 gi|79331520|ref|NP_001032107.1| calmodulin binding / translat... 161 6e-40 gi|1352345|sp|P25698|EF1A_SOYBN Elongation factor 1-alpha (EF... 161 6e-40 gi|1864017|dbj|BAA09709.1| elongation factor-1 alpha [Nicotiana 161 6e-40 gi|1169476|sp|P43643|EF1A_TOBAC Elongation factor 1-alpha (EF... 161 6e-40 gi|15239308|ref|NP_200847.1| calmodulin binding / translation... 161 6e-40 gi|40217939|gb|AAR82894.1| elongation factor 1-alpha [Cichorium 161 7e-40 gi|9802384|gb|AAF99703.1| elongation factor [Saccharum officinar 161 7e-40 gi|7230391|gb|AAF42979.1| elongation factor 1 alpha [Zea mays] 161 7e-40 gi|26324158|gb|AAN77897.1| elongation factor 1 alpha [Stevia reb 161 7e-40 gi|7230395|gb|AAF42981.1| elongation factor 1 alpha [Zea mays] 161 7e-40 gi|7230387|gb|AAF42977.1| elongation factor 1 alpha [Zea mays] 161 7e-40 gi|7230385|gb|AAF42976.1| elongation factor 1 alpha [Zea mays] 161 7e-40 gi|83283977|gb|ABC01896.1| elongation factor 1-alpha-like protei 161 7e-40 gi|82621190|gb|ABB86283.1| elongation factor-1 alpha-like [Solan 161 7e-40 gi|82400148|gb|ABB72813.1| elongation factor 1-alpha-like protei 161 7e-40 gi|81076159|gb|ABB55388.1| elongation factor 1-alpha-like [Solan 161 7e-40 gi|77999261|gb|ABB16977.1| elongation factor 1-alpha-like protei 161 7e-40 gi|461988|sp|P34824|EF1A1_HORVU Elongation factor 1-alpha (EF-1- 161 7e-40 gi|119150|sp|P17786|EF1A_LYCES Elongation factor 1-alpha (EF-... 161 7e-40 gi|461987|sp|P34823|EF1A2_DAUCA Elongation factor 1-alpha (EF... 161 7e-40 gi|24745945|dbj|BAC23049.1| Elongation factor 1-alpha [Solanum t 161 7e-40 gi|295789|emb|CAA34456.1| elongation factor 1-alpha [Arabidopsis 160 1e-39 gi|13605682|gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabi... 160 1e-39 gi|24371057|dbj|BAC22126.1| eukaryotic elongation factor 1A [Sua 160 1e-39 gi|29243204|dbj|BAC66180.1| elongation factor 1A [Avicennia mari 160 1e-39 gi|24371059|dbj|BAC22127.1| eukaryotic elongation factor 1A [Sal 160 1e-39 gi|7230397|gb|AAF42982.1| elongation factor 1 alpha [Zea mays] 160 2e-39 gi|7230393|gb|AAF42980.1| elongation factor 1 alpha [Zea mays] 159 2e-39 gi|110741201|dbj|BAF02151.1| elongation factor 1-alpha [Arabidop 159 4e-39 gi|6015054|sp|Q40034|EF1A2_HORVU Elongation factor 1-alpha (E... 159 4e-39 gi|15081765|gb|AAK82537.1| At1g07930/T6D22_3 [Arabidopsis thalia 158 6e-39 gi|108706481|gb|ABF94276.1| Elongation factor 1-alpha, putati... 157 1e-38 gi|77999299|gb|ABB16996.1| elongation factor 1-alpha-like protei 154 7e-38 gi|4731316|gb|AAD28440.1| elongation factor 1-alpha [Nicotiana t 154 1e-37 gi|12580861|emb|CAC27139.1| translation elongation factor-1 alph 153 2e-37 gi|18873727|gb|AAL79775.1| elongation factor 1 alpha [Saccharum 152 4e-37 gi|7230389|gb|AAF42978.1| elongation factor 1 alpha [Zea mays] 150 1e-36 gi|3122053|sp|Q41011|EF1A_PEA Elongation factor 1-alpha (EF-1... 150 1e-36 gi|7542600|gb|AAF63516.1|AF242732_1 translation elongation facto 145 4e-35 gi|40748293|gb|AAR89627.1| elongation factor 1 alpha [Citrus sin 145 5e-35 gi|33347395|gb|AAQ15280.1| elongation factor 1 alpha [Pyrus pyri 145 5e-35 gi|33347397|gb|AAQ15281.1| elongation factor 1 alpha [Pyrus pyri 145 5e-35 gi|1673426|emb|CAA68246.1| factor 1-alpha [Forsythia x intermedi 145 5e-35 gi|56112439|gb|AAV71174.1| elongation factor 1-alpha [Lotus corn 145 5e-35 gi|85717894|gb|ABC74971.1| elongation factor 1 alpha [Malus x do 145 5e-35 gi|1669668|emb|CAA65798.1| EF1-alpha [Forsythia x intermedia] 145 5e-35 gi|90823336|gb|ABE01138.1| elongation factor 1-alpha [Daucus car 136 2e-32 gi|29892963|emb|CAD60652.1| elongation factor [Solanum tuberosum 135 4e-32 gi|62362578|gb|AAX81595.1| elongation factor elF1-alpha [Populus 132 5e-31 gi|27414140|gb|AAO12048.1| elongation factor 1-alpha [Poncirus t 129 2e-30 gi|4586588|dbj|BAA76426.1| translation elongation factor [Cicer 128 7e-30 gi|92873453|gb|ABE81895.1| Protein synthesis factor, GTP-binding 119 2e-27 gi|119721291|gb|ABL98118.1| elongation factor 1-alpha [Euphorbia 103 2e-22 gi|54399516|gb|AAV34148.1| EF-1 alpha-like protein [Helicospo... 92.8 3e-19 gi|116061178|emb|CAL56566.1| Mitochondrial translation elonga... 89.0 5e-18 gi|116061031|emb|CAL56419.1| Mitochondrial translation elonga... 89.0 5e-18 gi|74272649|gb|ABA01120.1| elongation factor alpha-like protein 88.6 6e-18 gi|29539324|dbj|BAC67663.1| elongation factor-1alpha [Pleodorina 88.6 6e-18 gi|119672861|dbj|BAF42664.1| elongation factor-1 like protein [P 82.0 6e-16 gi|116057527|emb|CAL51954.1| Mitochondrial translation elonga... 82.0 6e-16 gi|92895648|gb|ABE92795.1| Zinc finger, RanBP2-type; AAA ATPa... 81.6 7e-16 gi|115461336|ref|NP_001054268.1| Os04g0677800 [Oryza sativa (... 80.9 1e-15 gi|38344203|emb|CAE05768.2| OSJNBa0064G10.19 [Oryza sativa (japo 80.9 1e-15 gi|115434174|ref|NP_001041845.1| Os01g0116600 [Oryza sativa (... 80.1 2e-15
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 236 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 332 Length of database: 101054579 Length adjustment: 78 Effective length of query: 254 Effective length of database: 78953357 Effective search space: 2526507424 Effective search space used: 2526507424 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)