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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168926448-31152-44021540605.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig19
Length=549

Distribution of 43 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|15242467|ref|NP_198790.1|  5S rRNA binding / structural con...   193    2e-76 UniGene infoGene info
gi|21592804|gb|AAM64753.1|  ribosomal protein, putative [Arabidop   193    2e-76 UniGene info
gi|18404552|ref|NP_566767.1|  ATL5 (A. THALIANA RIBOSOMAL PROT...   193    2e-76 UniGene infoGene info
gi|55976189|sp|Q6UNT2|RL5_CUCSA  60S ribosomal protein L5 >gi|...   192    6e-76
gi|56785264|dbj|BAD82173.1|  putative ribosomal protein L5 [Or...   182    2e-73
gi|115441607|ref|NP_001045083.1|  Os01g0896800 [Oryza sativa (...   184    3e-73 Gene info
gi|77999273|gb|ABB16983.1|  unknown [Solanum tuberosum]             179    8e-72
gi|55976534|sp|Q8L4L4|RL52_ORYSA  60S ribosomal protein L5-2 >...   182    4e-70
gi|115441605|ref|NP_001045082.1|  Os01g0896700 [Oryza sativa (...   182    4e-70 Gene info
gi|21952858|dbj|BAC06273.1|  putative 60S ribosomal protein L5...   184    6e-70 Gene info
gi|6094086|sp|O65353|RL5_HELAN  60S ribosomal protein L5 >gi|3...   137    2e-55
gi|6094085|sp|O22608|RL5_DUNSA  60S ribosomal protein L5 >gi|2...   136    4e-55
gi|116055139|emb|CAL57535.1|  60S ribosomal protein L5 (ISS) [Ost   130    1e-49
gi|13359453|dbj|BAB33422.1|  putative senescence-associated prote   191    2e-48
gi|45018114|gb|AAS54983.1|  NADH dehydrogenase subunit F [Carica   33.9    0.38 
gi|77025553|gb|ABA61595.1|  NADH dehydrogenase subunit F [Tiquili  31.6    1.9  
gi|77025561|gb|ABA61599.1|  NADH dehydrogenase subunit F [Tiqu...  30.8    3.2  
gi|77025559|gb|ABA61598.1|  NADH dehydrogenase subunit F [Tiquili  30.8    3.2  
gi|77025555|gb|ABA61596.1|  NADH dehydrogenase subunit F [Tiquili  30.8    3.2  
gi|32483892|gb|AAO85885.1|  NADH-dehydrogenase subunit F [Dorypho  30.0    5.5  
gi|6424842|gb|AAF08177.1|  NADH dehydrogenase subunit F [Alangium  30.0    5.5  
gi|6110322|gb|AAF03769.1|  NADH dehydrogenase subunit [Exacum aff  30.0    5.5  
gi|3808128|emb|CAA09898.1|  NADH dehydrogenase [Exacum affine]     30.0    5.5  
gi|92884402|gb|ABE87345.1|  hypothetical protein MtrDRAFT_AC15...  29.6    7.2  
gi|12656314|gb|AAK00825.1|  NADH dehydrogenase subunit F [Melochi  29.6    7.2  
gi|40949804|gb|AAF22390.2|  NADH dehydrogenase [Hesperochiron pum  29.3    9.4  
gi|30385713|gb|AAP22955.1|  Potyvirus VPg interacting protein [Pi  29.3    9.4  
gi|2228781|gb|AAB61925.1|  starch branching enzyme I [Triticum ae  29.3    9.4   UniGene infoGene info
gi|77025543|gb|ABA61590.1|  NADH dehydrogenase subunit F [Coldeni  29.3    9.4  
gi|11558468|emb|CAC17759.1|  NADH dehydrogenase subunit F [Gonoca  29.3    9.4
Alignments

>gi|15242467|ref|NP_198790.1| UniGene infoGene info 5S rRNA binding / structural constituent of ribosome [Arabidopsis 
thaliana]
 gi|19884108|sp|P49227|RL52_ARATH Gene info 60S ribosomal protein L5-2
 gi|10177974|dbj|BAB11380.1| Gene info 60S ribosomal protein L5 [Arabidopsis thaliana]
 gi|19310482|gb|AAL84975.1| UniGene infoGene info AT5g39740/MKM21_30 [Arabidopsis thaliana]
 gi|20260448|gb|AAM13122.1| UniGene infoGene info ribosomal protein L5 - like [Arabidopsis thaliana]
 gi|30984512|gb|AAP42719.1| UniGene infoGene info At5g39740 [Arabidopsis thaliana]
Length=301

 Score =  193 bits (491),  Expect(2) = 2e-76
 Identities = 94/105 (89%), Positives = 100/105 (95%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD+EYEGNVEATGEDF
Sbjct  71   GDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDF  130

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            SVEPT+SRRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  131  SVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  175


 Score =  112 bits (281),  Expect(2) = 2e-76
 Identities = 52/59 (88%), Positives = 56/59 (94%), Gaps = 0/59 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            MV+VK+ K+ AYFKRYQVKF+RRR GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD
Sbjct  1    MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  59


>gi|21592804|gb|AAM64753.1| UniGene info ribosomal protein, putative [Arabidopsis thaliana]
Length=301

 Score =  193 bits (491),  Expect(2) = 2e-76
 Identities = 94/105 (89%), Positives = 100/105 (95%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD+EYEGNVEATGEDF
Sbjct  71   GDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDF  130

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            SVEPT+SRRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  131  SVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  175


 Score =  112 bits (280),  Expect(2) = 2e-76
 Identities = 52/59 (88%), Positives = 56/59 (94%), Gaps = 0/59 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            MV+VK+ K+ AYFKRYQVKF+RRR GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD
Sbjct  1    MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  59


>gi|18404552|ref|NP_566767.1| UniGene infoGene info ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); structural constituent 
of ribosome [Arabidopsis thaliana]
 gi|108860938|sp|Q8LBI1|RL51_ARATH Gene info 60S ribosomal protein L5-1
 gi|15809788|gb|AAL06822.1| UniGene infoGene info AT5g39740/MKM21_30 [Arabidopsis thaliana]
 gi|17473632|gb|AAL38279.1| UniGene infoGene info 60S ribosomal protein L5 [Arabidopsis thaliana]
 gi|20148745|gb|AAM10263.1| UniGene infoGene info 60S ribosomal protein L5 [Arabidopsis thaliana]
 gi|22530962|gb|AAM96985.1| UniGene infoGene info putative ribosomal protein [Arabidopsis thaliana]
 gi|23198406|gb|AAN15730.1| UniGene infoGene info putative ribosomal protein [Arabidopsis thaliana]
 gi|27311643|gb|AAO00787.1| UniGene infoGene info ribosomal protein, putative [Arabidopsis thaliana]
 gi|30103105|gb|AAO73340.1| UniGene infoGene info ribosomal protein L5 [Arabidopsis thaliana]
 gi|30984510|gb|AAP42718.1| UniGene infoGene info At3g25520 [Arabidopsis thaliana]
Length=301

 Score =  193 bits (491),  Expect(2) = 2e-76
 Identities = 94/105 (89%), Positives = 100/105 (95%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD+EYEGNVEATGEDF
Sbjct  71   GDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDF  130

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            SVEPT+SRRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  131  SVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  175


 Score =  112 bits (280),  Expect(2) = 2e-76
 Identities = 52/59 (88%), Positives = 56/59 (94%), Gaps = 0/59 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            MV+VK+ K+ AYFKRYQVKF+RRR GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD
Sbjct  1    MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  59


>gi|55976189|sp|Q6UNT2|RL5_CUCSA  60S ribosomal protein L5
 gi|34484312|gb|AAQ72789.1|  60S ribosomal protein L5 [Cucumis sativus]
Length=302

 Score =  192 bits (488),  Expect(2) = 6e-76
 Identities = 93/105 (88%), Positives = 100/105 (95%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GDLVLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGED+
Sbjct  71   GDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDY  130

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            SVEP ++RRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  131  SVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  175


 Score =  112 bits (279),  Expect(2) = 6e-76
 Identities = 52/59 (88%), Positives = 55/59 (93%), Gaps = 0/59 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            M + K QKTKAYFKRYQVKFKRRR+GKTDYRARIRLINQDKNKYNTPKYRFVVR +NKD
Sbjct  1    MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKD  59


>gi|56785264|dbj|BAD82173.1|  putative ribosomal protein L5 [Oryza sativa (japonica cultivar-group)]
Length=304

 Score =  182 bits (462),  Expect(2) = 2e-73
 Identities = 87/105 (82%), Positives = 96/105 (91%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D+EYEGNVEATGED+
Sbjct  72   GDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDY  131

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
             VEP + RRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  132  YVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  176


 Score =  113 bits (283),  Expect(2) = 2e-73
 Identities = 53/57 (92%), Positives = 55/57 (96%), Gaps = 0/57 (0%)
 Frame = +3

Query  30   YVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            +VKTQKT AYFKR+QVKFKRRRQGKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKD
Sbjct  4    FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKD  60


>gi|115441607|ref|NP_001045083.1| Gene info Os01g0896800 [Oryza sativa (japonica cultivar-group)]
 gi|71153169|sp|P49625|RL51_ORYSA  60S ribosomal protein L5-1
 gi|56785265|dbj|BAD82174.1| Gene info putative ribosomal protein L5 [Oryza sativa (japonica cultivar-group)]
 gi|113534614|dbj|BAF06997.1| Gene info Os01g0896800 [Oryza sativa (japonica cultivar-group)]
Length=304

 Score =  184 bits (467),  Expect(2) = 3e-73
 Identities = 87/105 (82%), Positives = 97/105 (92%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D+EYEGN+EATGED+
Sbjct  72   GDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDY  131

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
             VEP + RRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  132  YVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  176


 Score =  111 bits (277),  Expect(2) = 3e-73
 Identities = 52/57 (91%), Positives = 54/57 (94%), Gaps = 0/57 (0%)
 Frame = +3

Query  30   YVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            +VKTQKT AY KR+QVKFKRRRQGKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKD
Sbjct  4    FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKD  60


>gi|77999273|gb|ABB16983.1|  unknown [Solanum tuberosum]
Length=302

 Score =  179 bits (454),  Expect(2) = 8e-72
 Identities = 85/105 (80%), Positives = 96/105 (91%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD++LA+AYA ELP +GL+VGLTNYAAAYCTGLLLARRVLK LEMDEEY+GN++  GED+
Sbjct  71   GDMILASAYASELPHFGLKVGLTNYAAAYCTGLLLARRVLKKLEMDEEYQGNLDVNGEDY  130

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            SVEP ESRRPFRALLDVGL+RTTTGNRV   LKGALDGG+DIPHS
Sbjct  131  SVEPAESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGIDIPHS  175


 Score =  111 bits (277),  Expect(2) = 8e-72
 Identities = 50/59 (84%), Positives = 56/59 (94%), Gaps = 0/59 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            M ++K QKT+AYFKR+QVKFKRRR+GKTDYRAR RLINQDKNKYNTPKYRFVVRFTN+D
Sbjct  1    MAFIKVQKTRAYFKRFQVKFKRRREGKTDYRARNRLINQDKNKYNTPKYRFVVRFTNRD  59


>gi|55976534|sp|Q8L4L4|RL52_ORYSA  60S ribosomal protein L5-2
 gi|21952857|dbj|BAC06272.1| Gene info putative 60S ribosomal protein L5 [Oryza sativa (japonica cultivar-group)]
Length=304

 Score =  182 bits (462),  Expect(2) = 4e-70
 Identities = 87/105 (82%), Positives = 96/105 (91%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D+EYEGNVEATGED+
Sbjct  72   GDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDY  131

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
             VEP + RRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  132  YVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  176


 Score =  102 bits (254),  Expect(2) = 4e-70
 Identities = 50/57 (87%), Positives = 52/57 (91%), Gaps = 3/57 (5%)
 Frame = +3

Query  30   YVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            +VKTQKT AYFKR+QVKFKRRRQGKTDYRARIRL NQDKNKYNTPKYRFV   TNKD
Sbjct  7    FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKD  60


>gi|115441605|ref|NP_001045082.1| Gene info Os01g0896700 [Oryza sativa (japonica cultivar-group)]
 gi|113534613|dbj|BAF06996.1| Gene info Os01g0896700 [Oryza sativa (japonica cultivar-group)]
Length=301

 Score =  182 bits (462),  Expect(2) = 4e-70
 Identities = 87/105 (82%), Positives = 96/105 (91%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D+EYEGNVEATGED+
Sbjct  69   GDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDY  128

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
             VEP + RRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  129  YVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  173


 Score =  102 bits (254),  Expect(2) = 4e-70
 Identities = 50/57 (87%), Positives = 52/57 (91%), Gaps = 3/57 (5%)
 Frame = +3

Query  30   YVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            +VKTQKT AYFKR+QVKFKRRRQGKTDYRARIRL NQDKNKYNTPKYRFV   TNKD
Sbjct  4    FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKD  57


>gi|21952858|dbj|BAC06273.1| Gene info putative 60S ribosomal protein L5 [Oryza sativa (japonica cultivar-group)]
Length=301

 Score =  184 bits (467),  Expect(2) = 6e-70
 Identities = 87/105 (82%), Positives = 97/105 (92%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D+EYEGN+EATGED+
Sbjct  69   GDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDY  128

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
             VEP + RRPFRALLDVGL+RTTTGNRV   LKGALDGGLDIPHS
Sbjct  129  YVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHS  173


 Score =  100 bits (248),  Expect(2) = 6e-70
 Identities = 49/57 (85%), Positives = 51/57 (89%), Gaps = 3/57 (5%)
 Frame = +3

Query  30   YVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKD  200
            +VKTQKT AY KR+QVKFKRRRQGKTDYRARIRL NQDKNKYNTPKYRFV   TNKD
Sbjct  4    FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKD  57


>gi|6094086|sp|O65353|RL5_HELAN  60S ribosomal protein L5
 gi|3153904|gb|AAC17448.1| UniGene info RPL5A-related protein [Helianthus annuus]
Length=297

 Score =  137 bits (344),  Expect(2) = 2e-55
 Identities = 68/106 (64%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD +L AAYAHELP+YG++VGLTNYAAAYCTGLLLAR++L  L +D+ Y G+ E TGE+F
Sbjct  71   GDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEF  130

Query  415  SVEPTE-SRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            +V+P E     FR  LDVGL+RTTTG RV   +KGA+DGGL+I HS
Sbjct  131  NVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHS  176


 Score = 99.0 bits (245),  Expect(2) = 2e-55
 Identities = 47/62 (75%), Positives = 51/62 (82%), Gaps = 0/62 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDX  203
            M +VK  K K YFKRYQVKFKRRR+GKTDY AR RLI QDKNKYNTPKYR VVRF+N+D 
Sbjct  1    MGFVKVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDI  60

Query  204  YC  209
             C
Sbjct  61   TC  62


>gi|6094085|sp|O22608|RL5_DUNSA  60S ribosomal protein L5
 gi|2599104|gb|AAB84056.1|  60S ribosomal protein [Dunaliella salina]
Length=271

 Score =  136 bits (342),  Expect(2) = 4e-55
 Identities = 65/106 (61%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+V+AAAY+ ELP YGL+VGLTNY+AAYC GLL+ARR+L  L + + Y+G  E  GED+
Sbjct  71   GDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYKGQEEPDGEDY  130

Query  415  SVEPTE-SRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            +VEP E   +PF  LLD GL RT+TG++V   +KGALDGGLDIPH+
Sbjct  131  NVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHN  176


 Score = 98.6 bits (244),  Expect(2) = 4e-55
 Identities = 45/62 (72%), Positives = 51/62 (82%), Gaps = 0/62 (0%)
 Frame = +3

Query  24   MVYVKTQKTKAYFKRYQVKFKRRRQGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDX  203
            M YVK  KT  YF RYQVK++RRRQGKTDYRAR+RL+ QDKNKYNT KYR VVRF+NK+ 
Sbjct  1    MGYVKVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNV  60

Query  204  YC  209
             C
Sbjct  61   TC  62


>gi|116055139|emb|CAL57535.1|  60S ribosomal protein L5 (ISS) [Ostreococcus tauri]
Length=331

 Score =  130 bits (326),  Expect(2) = 1e-49
 Identities = 63/106 (59%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+ + AAY+HELP+YG++ GLTNYAA Y TGLL ARR+L    + + YEG  E  GED+
Sbjct  80   GDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDY  139

Query  415  SVEP-TESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
             VE   E  RPF+  LD GLVRT+TG RV   LKGA+DGGLDIPH+
Sbjct  140  HVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHN  185


 Score = 86.7 bits (213),  Expect(2) = 1e-49
 Identities = 43/57 (75%), Positives = 46/57 (80%), Gaps = 2/57 (3%)
 Frame = +3

Query  45   KTKAYFKRYQVKFKRRRQG--KTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDXYC  209
            KT AY  RYQVKF RRR G  KTDY+AR RLI QDKNKYN+PKYRFVVRFTN+D  C
Sbjct  15   KTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVC  71


>gi|13359453|dbj|BAB33422.1|  putative senescence-associated protein [Pisum sativum]
Length=279

 Score =  191 bits (484),  Expect = 2e-48
 Identities = 93/105 (88%), Positives = 98/105 (93%), Gaps = 0/105 (0%)
 Frame = +1

Query  235  GDLVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDF  414
            GD+VL AAYAHELP YGLEVGLTNYAAAYCTGLLLARRVLK LEMDEEYEGNVEA+GED+
Sbjct  51   GDIVLCAAYAHELPHYGLEVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEGNVEASGEDY  110

Query  415  SVEPTESRRPFRALLDVGLVRTTTGNRVXXCLKGALDGGLDIPHS  549
            SVEP +SRRPFRALLDVGLV+TTTGNRV   LKGALDGGLDIPHS
Sbjct  111  SVEPADSRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDIPHS  155


>gi|45018114|gb|AAS54983.1|  NADH dehydrogenase subunit F [Carica papaya]
Length=333

 Score = 33.9 bits (76),  Expect = 0.38
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G  A   F   + T   H+++       H QN + K+  S  S SI GK   
Sbjct  70   AVIACSTAGLTAFYMFRIYLLTFEGHLNI-------HFQNYSGKKSSSFYSISIWGKEEA  122

Query  288  KPISRKFMGIS  256
            KPI+R +  +S
Sbjct  123  KPINRNYCLVS  133


>gi|77025553|gb|ABA61595.1|  NADH dehydrogenase subunit F [Tiquilia sp. 'Durango']
Length=686

 Score = 31.6 bits (70),  Expect = 1.9
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I   T G  A   F   + T   H+++       H QN + K+  +  S S+ GK   
Sbjct  424  AIIASGTAGLTAFYMFRMYLLTFEGHLNV-------HFQNYSGKQNTAFYSLSLWGKRGS  476

Query  288  KPISRKFMGISCCKDQITS  232
            K I++KF  ++   +Q TS
Sbjct  477  KGINKKFRLLTINNNQNTS  495


>gi|77025561|gb|ABA61599.1|  NADH dehydrogenase subunit F [Tiquilia tuberculata]
 gi|77025563|gb|ABA61600.1|  NADH dehydrogenase subunit F [Tiquilia tuberculata]
 gi|77025565|gb|ABA61601.1|  NADH dehydrogenase subunit F [Tiquilia mexicana]
 gi|77025567|gb|ABA61602.1|  NADH dehydrogenase subunit F [Tiquilia gossypina]
Length=686

 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I   T G  A   F   + T   H+++       H QN + K+     S S+ GK   
Sbjct  424  AIIASGTAGLTAFYMFRMYLLTFEGHLNV-------HFQNYSGKQNTPFYSLSLWGKRGS  476

Query  288  KPISRKFMGISCCKDQITS  232
            K I++KF  ++   +Q TS
Sbjct  477  KGINKKFRLLTINNNQNTS  495


>gi|77025559|gb|ABA61598.1|  NADH dehydrogenase subunit F [Tiquilia gossypina]
Length=684

 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I   T G  A   F   + T   H+++       H QN + K+     S S+ GK   
Sbjct  422  AIIASGTAGLTAFYMFRMYLLTFEGHLNV-------HFQNYSGKQNTPFYSLSLWGKRGS  474

Query  288  KPISRKFMGISCCKDQITS  232
            K I++KF  ++   +Q TS
Sbjct  475  KGINKKFRLLTINNNQNTS  493


>gi|77025555|gb|ABA61596.1|  NADH dehydrogenase subunit F [Tiquilia mexicana]
Length=686

 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I   T G  A   F   + T   H+++       H QN + K+     S S+ GK   
Sbjct  424  AIIASGTAGLTAFYMFRMYLLTFEGHLNV-------HFQNYSGKQNTPFYSLSLWGKRGS  476

Query  288  KPISRKFMGISCCKDQITS  232
            K I++KF  ++   +Q TS
Sbjct  477  KGINKKFRLLTINNNQNTS  495


>gi|32483892|gb|AAO85885.1|  NADH-dehydrogenase subunit F [Doryphora sassafras]
Length=643

 Score = 30.0 bits (66),  Expect = 5.5
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G  A   F   + T   H+ +       H QN +  +  S+ S SI GK   
Sbjct  401  AIIACSTAGLTAFYMFRMYLLTFDGHLHV-------HFQNYSGTQNSSSYSISIWGKEGT  453

Query  288  KPISR  274
            KPI+R
Sbjct  454  KPINR  458


>gi|6424842|gb|AAF08177.1|  NADH dehydrogenase subunit F [Alangium platanifolium]
Length=744

 Score = 30.0 bits (66),  Expect = 5.5
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G  A   F   + T   H+++       H QN + K+  S  S S+ GK   
Sbjct  432  AIIACSTAGLNAFYMFRIYLLTFEGHLNV-------HFQNYSGKKNKSFYSISLWGKGGL  484

Query  288  KPISRKF  268
            K I++KF
Sbjct  485  KSINKKF  491


>gi|6110322|gb|AAF03769.1|  NADH dehydrogenase subunit [Exacum affine]
Length=521

 Score = 30.0 bits (66),  Expect = 5.5
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G      F     T   H+S+       H QN + K+K    S S+ GK   
Sbjct  424  AIIAWSTAGLXXFYMFRIYFLTFEGHLSV-------HFQNYSGKQKIPFYSISLWGKGVS  476

Query  288  KPISRKFMGISCCKDQITSNTCRYY  214
            K IS+KF     C   I S++ R Y
Sbjct  477  KRISKKF-----CLGTIESSSKRTY  496


>gi|3808128|emb|CAA09898.1|  NADH dehydrogenase [Exacum affine]
Length=730

 Score = 30.0 bits (66),  Expect = 5.5
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G  A   F     T   H+S+       H QN + K+K    S S+ GK   
Sbjct  432  AIIAWSTAGLTAFYMFRIYFLTFEGHLSV-------HFQNYSGKQKIPFYSISLWGKGVS  484

Query  288  KPISRKF  268
            K IS+KF
Sbjct  485  KRISKKF  491


>gi|92884402|gb|ABE87345.1|  hypothetical protein MtrDRAFT_AC152067g4v1 [Medicago truncatula]
Length=281

 Score = 29.6 bits (65),  Expect = 7.2
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 14/53 (26%)
 Frame = -1

Query  288  KPISRKFMGISCCKDQITSNTCRYYLCNNXPCW*IEQQIDTWVCCIYSCPDLS  130
            KP   + M +SC K  + +  CR   C+          IDTW+C +   PDL+
Sbjct  127  KPYKSRKMRLSCTKSPVDNKYCR---CS----------IDTWICSVIG-PDLN  165


>gi|12656314|gb|AAK00825.1|  NADH dehydrogenase subunit F [Melochia corymbosa]
Length=709

 Score = 29.6 bits (65),  Expect = 7.2
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G  A   F   + T   H+++       H QN + K+  S  S  + GK   
Sbjct  432  AIIAWSTAGLTAFYMFRIYLLTFEGHLTI-------HFQNYSGKKNSSFYSIKLWGKEEQ  484

Query  288  KPISRKF  268
            K I+RKF
Sbjct  485  KIINRKF  491


>gi|40949804|gb|AAF22390.2|  NADH dehydrogenase [Hesperochiron pumilis]
Length=690

 Score = 29.3 bits (64),  Expect = 9.4
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  ST G  A   F   + T   H+++       H QN + K+  S  S S+ GK   
Sbjct  418  AIIAWSTAGLTAFYMFRIYLLTFEGHLNV-------HFQNYSGKQNISFYSLSLWGKRGS  470

Query  288  KPISRKF  268
            K I +KF
Sbjct  471  KTIKKKF  477


>gi|30385713|gb|AAP22955.1|  Potyvirus VPg interacting protein [Pisum sativum]
Length=513

 Score = 29.3 bits (64),  Expect = 9.4
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 0/66 (0%)
 Frame = -1

Query  387  SLIFLIHFKHLQNTASKEKPSTISCSIIGKTHFKPISRKFMGISCCKDQITSNTCRYYLC  208
            SLI +  +K  +N A + +     CS    T+        M + C K     NTCR+  C
Sbjct  133  SLIEIFLYKRCRNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGC  192

Query  207  NNXPCW  190
            + X  W
Sbjct  193  DLXSHW  198


>gi|2228781|gb|AAB61925.1| UniGene infoGene info starch branching enzyme I [Triticum aestivum]
Length=686

 Score = 29.3 bits (64),  Expect = 9.4
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
 Frame = -1

Query  330  PSTISCSIIGKTHFKPISRKFMGISCC  250
            PST SC+ +G ++  P S+ F+G   C
Sbjct  650  PSTSSCAFLGPSNQSPFSKPFIGFPGC  676


>gi|77025543|gb|ABA61590.1|  NADH dehydrogenase subunit F [Coldenia procumbens]
Length=686

 Score = 29.3 bits (64),  Expect = 9.4
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = -1

Query  468  ANIKKSTEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHF  289
            A I  +T G  A   F   + T   H+++       H QN + K+  S  S S+ GK   
Sbjct  424  AIIAWATAGLTAFYMFRIYLLTFEGHLNV-------HFQNYSGKQNTSLYSLSLWGKGGS  476

Query  288  KPISRKF  268
            K I++KF
Sbjct  477  KEINKKF  483


>gi|11558468|emb|CAC17759.1|  NADH dehydrogenase subunit F [Gonocaryum litorale]
Length=710

 Score = 29.3 bits (64),  Expect = 9.4
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = -1

Query  453  STEGPPALSRFNRKIFTSSLHISLIFLIHFKHLQNTASKEKPSTISCSIIGKTHFKPISR  274
            ST G  A   F   + T   H+++       H QN + K+     S S+ GKT  K I++
Sbjct  435  STAGLTAFYMFRIYLLTFEGHLNV-------HFQNYSGKKNTPFYSISLWGKTGSKWINK  487

Query  273  KFMGISCCKDQITSN  229
             F  ++  K ++ +N
Sbjct  488  NFCLLTLLKLKMNNN  502







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 393
Number of extensions: 3
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 549
Length of database: 101054579
Length adjustment: 106
Effective length of query: 443
Effective length of database: 71019585
Effective search space: 5468508045
Effective search space used: 5468508045
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)