Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926463-32110-42903553666.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig20 Length=499
Score E Sequences producing significant alignments: (Bits) Value gi|42572439|ref|NP_974315.1| unknown protein [Arabidopsis thalia 155 7e-38 gi|22331093|ref|NP_188104.2| unknown protein [Arabidopsis tha... 155 7e-38 gi|11994597|dbj|BAB02652.1| unnamed protein product [Arabidopsis 155 7e-38 gi|115445197|ref|NP_001046378.1| Os02g0234200 [Oryza sativa (... 145 6e-35 gi|30698020|ref|NP_177185.3| unknown protein [Arabidopsis thalia 102 7e-22 gi|115467514|ref|NP_001057356.1| Os06g0269300 [Oryza sativa (... 102 7e-22 gi|115448467|ref|NP_001048013.1| Os02g0730400 [Oryza sativa (... 102 7e-22 gi|22329761|ref|NP_173800.2| unknown protein [Arabidopsis tha... 95.9 7e-20 gi|3176691|gb|AAC18814.1| Contains homology to serine/threoni... 95.1 1e-19 gi|30698018|ref|NP_850974.1| unknown protein [Arabidopsis tha... 94.4 2e-19 gi|9369390|gb|AAF87138.1|AC002423_3 T23E23.5 [Arabidopsis thalia 93.6 3e-19 gi|9755656|emb|CAC01808.1| putative protein [Arabidopsis thalian 92.8 6e-19 gi|30685100|ref|NP_196993.2| unknown protein [Arabidopsis thalia 91.3 2e-18 gi|42571623|ref|NP_973902.1| unknown protein [Arabidopsis thalia 52.0 1e-06 gi|18395326|ref|NP_564209.1| unknown protein [Arabidopsis tha... 52.0 1e-06 gi|9369410|gb|AAF87158.1|AC002423_23 T23E23.6 [Arabidopsis thali 52.0 1e-06 gi|115476416|ref|NP_001061804.1| Os08g0414600 [Oryza sativa (... 47.8 2e-05 gi|92879124|gb|ABE85368.1| NHL repeat [Medicago truncatula] >... 43.5 4e-04 gi|14627128|emb|CAC44040.1| fatty acid hydroperoxide lyase [Sola 32.7 0.68 gi|68532879|dbj|BAE06064.1| xyloglucan endotransglucosylase/hydr 31.6 1.5 gi|115487444|ref|NP_001066209.1| Os12g0159100 [Oryza sativa (... 31.2 2.0 gi|108862225|gb|ABA96519.2| hypothetical protein LOC_Os12g062... 31.2 2.0 gi|4455222|emb|CAB36545.1| hypothetical protein [Arabidopsis ... 31.2 2.0 gi|7677378|gb|AAF67142.1|AF230372_1 fatty acid hydroperoxide lya 31.2 2.0 gi|13506709|gb|AAK27265.1| fatty acid hydroperoxide lyase [Lycop 31.2 2.0 gi|4850214|emb|CAB43022.1| hydroperoxide lyase [Solanum lycopers 31.2 2.0 gi|92874580|gb|ABE82825.1| Ubiquitin-associated [Medicago trunca 30.4 3.4 gi|115482262|ref|NP_001064724.1| Os10g0447900 [Oryza sativa (... 29.6 5.8 gi|92896153|gb|ABE93071.1| arabinogalactan-protein precursor [Me 29.6 5.8 gi|21593155|gb|AAM65104.1| putative phosphotyrosyl phosphatas... 29.6 5.8 gi|19171691|gb|AAL85640.1| trypsin inhibitor [Herrania albifl... 29.6 5.8 gi|18413175|ref|NP_567342.1| phosphatase activator [Arabidops... 29.6 5.8 gi|4325370|gb|AAD17366.1| similar to human phosphotyrosyl pho... 29.6 5.8 gi|15054789|gb|AAK82719.1|AF288569_1 putative Pto-like serine/th 29.3 7.5 gi|15054787|gb|AAK82718.1|AF288568_1 putative Pto-like serine/th 29.3 7.5 gi|16905219|gb|AAL31089.1|AC091749_18 hypothetical protein [O... 29.3 7.5 gi|115450683|ref|NP_001048942.1| Os03g0144000 [Oryza sativa (... 28.9 9.8 gi|115434504|ref|NP_001042010.1| Os01g0146700 [Oryza sativa (... 28.9 9.8 gi|108706141|gb|ABF93936.1| expressed protein [Oryza sativa (jap 28.9 9.8 gi|115437036|ref|NP_001043195.1| Os01g0516700 [Oryza sativa (... 28.9 9.8 gi|55296509|dbj|BAD68723.1| unknown protein [Oryza sativa (japon 28.9 9.8 gi|2437852|emb|CAA04889.1| viviparous-1 [Zea mays] 28.9 9.8 gi|138603|sp|P26307|VIV1_MAIZE Regulatory protein viviparous-... 28.9 9.8 gi|9759069|dbj|BAB09547.1| unnamed protein product [Arabidopsis 28.9 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 384 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 499 Length of database: 101054579 Length adjustment: 105 Effective length of query: 394 Effective length of database: 71302934 Effective search space: 4349478974 Effective search space used: 4349478974 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)