RID=1168926724-7995-201314977297.BLASTQ1, Contig22

Alignments
 

>gi|115466664|ref|NP_001056931.1|  Os06g0170500 [Oryza sativa (japonica cultivar-group)]
 gi|55773636|dbj|BAD72175.1|  RRM-containing RNA-binding protein-like [Oryza sativa (japonica 
cultivar-group)]
 gi|113594971|dbj|BAF18845.1|  Os06g0170500 [Oryza sativa (japonica cultivar-group)]
Length=482

 Score =  387 bits (994),  Expect = 2e-107
 Identities = 177/191 (92%), Positives = 183/191 (95%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            DAQADGWERSDFPIICESCLGDNPYVRM RA+YDKECKIC RPFTVFRWRPGRDARYKKT
Sbjct  8    DAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKT  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIP+SDVNREYFAEEHDR+AR
Sbjct  68   EICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHDRKAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AGIDY+SS+GK RPNDTILKLQRT PYYKRNRAHVCSFY RGECTRGAECPYRHEMP TG
Sbjct  128  AGIDYDSSHGKARPNDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|83283985|gb|ABC01900.1|  RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length=487

 Score =  384 bits (987),  Expect = 1e-106
 Identities = 177/191 (92%), Positives = 184/191 (96%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            DA+ADGWERSDFPIICESCLGD+PYVRMT+ADYDKECKICTRPFTVFRWRPGRDARYKK+
Sbjct  8    DAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKKS  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSNDAIPKSDVNREYFAEEHDRRAR
Sbjct  68   EICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AGIDYESSYGKVR NDTILKLQRTTPYYKRNRAHVCSFY RG+CTRG ECPYRHEMP TG
Sbjct  128  AGIDYESSYGKVRANDTILKLQRTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|92888657|gb|ABE89510.1|  U2 auxiliary factor small subunit [Medicago truncatula]
Length=492

 Score =  383 bits (983),  Expect = 3e-106
 Identities = 174/191 (91%), Positives = 185/191 (96%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            D +ADGWERSDFPIICESCLGD+PYVRMT+A+YDKECKICTRPFTVFRWRPGRDARYKK+
Sbjct  8    DHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKS  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+I+SNDAIPKSDVNREYFAEEHDR+AR
Sbjct  68   EICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AGIDYESS+GK RPNDTILKLQRTTPYYKRNRAH+CSFY RGECTRGAECPYRHEMPVTG
Sbjct  128  AGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPVTG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|82400164|gb|ABB72821.1|  RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length=462

 Score =  382 bits (982),  Expect = 4e-106
 Identities = 176/191 (92%), Positives = 183/191 (95%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            DA+ADGWERSDFPIICESCLGD+PYVRMT+ADYDKECKICTRPFTVFRWRPGRDARYKK+
Sbjct  8    DAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKKS  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTC KLKNVCQVCLLDLEYGLPVQ RDTAL+INSNDAIPKSDVNREYFAEEHDRRAR
Sbjct  68   EICQTCSKLKNVCQVCLLDLEYGLPVQFRDTALSINSNDAIPKSDVNREYFAEEHDRRAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AGIDYESSYGKVR NDTILKLQRTTPYYKRNRAHVCSFY RG+CTRG ECPYRHEMP TG
Sbjct  128  AGIDYESSYGKVRANDTILKLQRTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|115471551|ref|NP_001059374.1|  Os07g0281000 [Oryza sativa (japonica cultivar-group)]
 gi|34394813|dbj|BAC84225.1|  RRM-containing RNA-binding protein-like [Oryza sativa (japonica 
cultivar-group)]
 gi|113610910|dbj|BAF21288.1|  Os07g0281000 [Oryza sativa (japonica cultivar-group)]
Length=486

 Score =  380 bits (977),  Expect = 1e-105
 Identities = 175/191 (91%), Positives = 180/191 (94%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            DAQADGWERSDFPIICESCLGDNPYVRM RA+YDKECKIC RPFTVFRWRPGRDARYKKT
Sbjct  8    DAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKT  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL+ NSNDAIP+SDVNREYFAEEHDRRAR
Sbjct  68   EICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAEEHDRRAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AGIDY+SS GK R NDTILKLQRT PYYKRNRAHVCSFY RGECTRGAECPYRHEMP TG
Sbjct  128  AGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|15450878|gb|AAK96710.1|  Unknown protein [Arabidopsis thaliana]
 gi|21387095|gb|AAM47951.1|  unknown protein [Arabidopsis thaliana]
Length=481

 Score =  380 bits (976),  Expect = 2e-105
 Identities = 172/191 (90%), Positives = 185/191 (96%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            D +ADGWERSDFPIICESCLGDNPYVRMT+A+YDKECKICTRPFTVFRWRPGRDARYKKT
Sbjct  8    DHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGRDARYKKT  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL I+++D+IPKSDVNREYFAEEHDR+AR
Sbjct  68   EICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAEEHDRKAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AG+DYESS+GK+RPNDTILKLQRTTPYYKRNRAHVCSF+ RGECTRGAECPYRHEMP TG
Sbjct  128  AGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|18390760|ref|NP_563788.1|  RNA binding / nucleic acid binding [Arabidopsis thaliana]
 gi|8778549|gb|AAF79557.1|AC022464_15  F22G5.30 [Arabidopsis thaliana]
Length=481

 Score =  380 bits (976),  Expect = 2e-105
 Identities = 172/191 (90%), Positives = 185/191 (96%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            D +ADGWERSDFPIICESCLGDNPYVRMT+A+YDKECKICTRPFTVFRWRPGRDARYKKT
Sbjct  8    DHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGRDARYKKT  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL I+++D+IPKSDVNREYFAEEHDR+AR
Sbjct  68   EICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAEEHDRKAR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AG+DYESS+GK+RPNDTILKLQRTTPYYKRNRAHVCSF+ RGECTRGAECPYRHEMP TG
Sbjct  128  AGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|15227567|ref|NP_180518.1|  RNA binding / nucleic acid binding [Arabidopsis thaliana]
 gi|16226863|gb|AAL16284.1|AF428354_1  At2g29580/F16P2.4 [Arabidopsis thaliana]
 gi|3980378|gb|AAC95181.1|  putative RNA-binding protein [Arabidopsis thaliana]
 gi|27363236|gb|AAO11537.1|  At2g29580/F16P2.4 [Arabidopsis thaliana]
Length=483

 Score =  371 bits (952),  Expect = 1e-102
 Identities = 167/191 (87%), Positives = 181/191 (94%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            D +ADGWERSDFPIICESCLGDNPYVRMT+A+YDKECKICTRPFTVFRWRPGRDARYKKT
Sbjct  8    DHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGRDARYKKT  67

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL I+++D+IPKSDVNRE+FAEEHDR+ R
Sbjct  68   EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAEEHDRKTR  127

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AG+DYESS+GK+RPNDTI  LQRTTPYYKRNRAH+CSF+ RGECTRG ECPYRHEMP TG
Sbjct  128  AGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYRHEMPETG  187

Query  542  ELSQQXXKDRY  574
            ELSQQ  KDRY
Sbjct  188  ELSQQNIKDRY  198


>gi|116831459|gb|ABK28682.1|  unknown [Arabidopsis thaliana]
Length=364

 Score =  318 bits (815),  Expect = 9e-87
 Identities = 142/191 (74%), Positives = 165/191 (86%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            D  ADGWE +DFPI CESC GDNPY+RMTRADYDKECKIC+RPFT FRWRPGR+AR+KKT
Sbjct  5    DHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGRNARFKKT  64

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTC KLKNVCQVCLLDL +GLPVQVRD+AL INS+ ++P S VNREYFA+EHD + R
Sbjct  65   EICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFADEHDPKTR  124

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AG+DYESS+GK++PNDTILKLQR TP Y++NR  +CSFY  G+C RGAEC +RHEMP TG
Sbjct  125  AGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFRHEMPETG  184

Query  542  ELSQQXXKDRY  574
            ELS Q  +DRY
Sbjct  185  ELSHQNIRDRY  195


>gi|15240684|ref|NP_196323.1|  RNA binding / nucleic acid binding [Arabidopsis thaliana]
 gi|9759562|dbj|BAB11164.1|  RNA-binding protein-like [Arabidopsis thaliana]
 gi|91806814|gb|ABE66134.1|  zinc finger family protein [Arabidopsis thaliana]
Length=363

 Score =  318 bits (815),  Expect = 9e-87
 Identities = 142/191 (74%), Positives = 165/191 (86%), Gaps = 0/191 (0%)
 Frame = +2

Query  2    DAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKT  181
            D  ADGWE +DFPI CESC GDNPY+RMTRADYDKECKIC+RPFT FRWRPGR+AR+KKT
Sbjct  5    DHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGRNARFKKT  64

Query  182  EVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRAR  361
            E+CQTC KLKNVCQVCLLDL +GLPVQVRD+AL INS+ ++P S VNREYFA+EHD + R
Sbjct  65   EICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFADEHDPKTR  124

Query  362  AGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEMPVTG  541
            AG+DYESS+GK++PNDTILKLQR TP Y++NR  +CSFY  G+C RGAEC +RHEMP TG
Sbjct  125  AGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFRHEMPETG  184

Query  542  ELSQQXXKDRY  574
            ELS Q  +DRY
Sbjct  185  ELSHQNIRDRY  195


>gi|116058260|emb|CAL53449.1|  FOG: RRM domain (ISS) [Ostreococcus tauri]
Length=380

 Score =  184 bits (466),  Expect = 3e-46
 Identities = 89/189 (47%), Positives = 115/189 (60%), Gaps = 9/189 (4%)
 Frame = +2

Query  32   DFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKTEVCQTCCKLK  211
            DFP++CE CLG NPYVRM +     EC I  RPF V+RWRPG DARYKKT VC+     K
Sbjct  11   DFPVVCEDCLGPNPYVRMMKIPRGSECAISGRPFDVYRWRPGSDARYKKTVVCKEIALAK  70

Query  212  NVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYG  391
            NVCQVCLLDL+YG+PV  RD AL     +A+P S VNR++      ++   G D      
Sbjct  71   NVCQVCLLDLDYGIPVAARDAALGRAGGNALPSSSVNRDFAVNAIAKKLDEGEDAYEHGE  130

Query  392  KVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYR--------HEMPVTGEL  547
            K R N+ +++L R  PYY +N++ +C+F+ R  CTR  +CPYR         E+    EL
Sbjct  131  KERNNELLMRLARKKPYYNKNKSPICTFWLRNACTRN-DCPYRPCNGDTNMPELSAAPEL  189

Query  548  SQQXXKDRY  574
             +Q  KDRY
Sbjct  190  RKQNIKDRY  198


>gi|115437784|ref|NP_001043380.1|  Os01g0572100 [Oryza sativa (japonica cultivar-group)]
 gi|113532911|dbj|BAF05294.1|  Os01g0572100 [Oryza sativa (japonica cultivar-group)]
Length=784

 Score = 38.5 bits (88),  Expect = 0.017
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query  386  YGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEM  529
            +GK +  +       TTP  K   +  C+ YARG C +G +CPY HE+
Sbjct  440  HGKCQQGNLCKFSHDTTPLTK---SKPCTHYARGSCLKGDDCPYDHEL  484


 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +2

Query  416  LKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHE  526
            LKLQ   P  K     VC FY  G+C +G  C + H+
Sbjct  421  LKLQ---PVIKPKVVKVCHFYLHGKCQQGNLCKFSHD  454


>gi|52076312|dbj|BAD45097.1|  zinc finger (CCCH-type) protein-like [Oryza sativa (japonica 
cultivar-group)]
Length=698

 Score = 38.5 bits (88),  Expect = 0.017
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query  386  YGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHEM  529
            +GK +  +       TTP  K   +  C+ YARG C +G +CPY HE+
Sbjct  440  HGKCQQGNLCKFSHDTTPLTK---SKPCTHYARGSCLKGDDCPYDHEL  484


 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +2

Query  416  LKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHE  526
            LKLQ   P  K     VC FY  G+C +G  C + H+
Sbjct  421  LKLQ---PVIKPKVVKVCHFYLHGKCQQGNLCKFSHD  454


>gi|115474695|ref|NP_001060944.1|  Os08g0135800 [Oryza sativa (japonica cultivar-group)]
 gi|38636820|dbj|BAD03060.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|46390802|dbj|BAD16308.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113622913|dbj|BAF22858.1|  Os08g0135800 [Oryza sativa (japonica cultivar-group)]
Length=958

 Score = 37.4 bits (85),  Expect = 0.038
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 0/28 (0%)
 Frame = +2

Query  443  YKRNRAHVCSFYARGECTRGAECPYRHE  526
            ++R   + C F+A G C RG  CPY HE
Sbjct  371  HRRTNKNPCKFFANGGCRRGQNCPYLHE  398


 Score = 30.0 bits (66),  Expect = 6.1
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 0/34 (0%)
 Frame = +2

Query  425  QRTTPYYKRNRAHVCSFYARGECTRGAECPYRHE  526
            +R+ P  +      C  + +G C+RGA C Y H+
Sbjct  306  ERSEPRREYRSTMPCHDFVKGRCSRGANCRYVHD  339


>gi|115464687|ref|NP_001055943.1|  Os05g0497500 [Oryza sativa (japonica cultivar-group)]
 gi|113579494|dbj|BAF17857.1|  Os05g0497500 [Oryza sativa (japonica cultivar-group)]
Length=646

 Score = 37.0 bits (84),  Expect = 0.050
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
 Frame = +2

Query  449  RNRAHVCSFYARGECTRGAECPYRHEMPVTGELSQ  553
            + R   C+FYA+G C  G  C + HE  V+G  +Q
Sbjct  119  KTRKRTCTFYAQGRCKNGKSCTFLHEGEVSGSDNQ  153


>gi|46981267|gb|AAT07585.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|48475209|gb|AAT44278.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=703

 Score = 37.0 bits (84),  Expect = 0.050
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
 Frame = +2

Query  449  RNRAHVCSFYARGECTRGAECPYRHEMPVTGELSQ  553
            + R   C+FYA+G C  G  C + HE  V+G  +Q
Sbjct  176  KTRKRTCTFYAQGRCKNGKSCTFLHEGEVSGSDNQ  210


>gi|4432832|gb|AAD20681.1|  putative RNA methyltransferase [Arabidopsis thaliana]
Length=850

 Score = 37.0 bits (84),  Expect = 0.050
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
 Frame = +2

Query  254  PVQVRDTALAINSNDAIPKSDVNREYFAEE-HDRRARAGIDYESSYGKVRPNDTILKLQR  430
            P  V    +  +S D +P SD N     E   ++R RA  D +++   +  +DT  K+  
Sbjct  21   PASVEPIPMETSSIDELPSSDSNATDNIEAVGEKRKRADEDEKTN---LESSDT--KITT  75

Query  431  TTPYYKRNRAHVCSFYAR-GECTRGAECPYRH  523
             +P++K +   +CS++ R   C+ G EC Y H
Sbjct  76   PSPWWKTS---LCSYFRREASCSHGNECKYAH  104


>gi|30683900|ref|NP_180412.2|  nucleic acid binding [Arabidopsis thaliana]
 gi|22135822|gb|AAM91097.1|  At2g28450/T1B3.3 [Arabidopsis thaliana]
 gi|25090447|gb|AAN72304.1|  At2g28450/T1B3.3 [Arabidopsis thaliana]
Length=809

 Score = 37.0 bits (84),  Expect = 0.050
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
 Frame = +2

Query  254  PVQVRDTALAINSNDAIPKSDVNREYFAEE-HDRRARAGIDYESSYGKVRPNDTILKLQR  430
            P  V    +  +S D +P SD N     E   ++R RA  D +++   +  +DT  K+  
Sbjct  21   PASVEPIPMETSSIDELPSSDSNATDNIEAVGEKRKRADEDEKTN---LESSDT--KITT  75

Query  431  TTPYYKRNRAHVCSFYAR-GECTRGAECPYRH  523
             +P++K +   +CS++ R   C+ G EC Y H
Sbjct  76   PSPWWKTS---LCSYFRREASCSHGNECKYAH  104


>gi|115456325|ref|NP_001051763.1|  Os03g0826400 [Oryza sativa (japonica cultivar-group)]
 gi|15042832|gb|AAK82455.1|AC091247_22  putative RNA binding protein [Oryza sativa]
 gi|18855068|gb|AAL79760.1|AC096687_24  putative small nuclear ribonucleoprotein [Oryza sativa]
 gi|108711850|gb|ABF99645.1|  RNA recognition motif family protein, expressed [Oryza sativa 
(japonica cultivar-group)]
 gi|113550234|dbj|BAF13677.1|  Os03g0826400 [Oryza sativa (japonica cultivar-group)]
Length=312

 Score = 36.6 bits (83),  Expect = 0.065
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = +2

Query  368  IDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHE  526
            +D+ S Y K    D   +LQ+     KR    VC  + +GEC RGA C Y H+
Sbjct  109  VDHVSKYKKKEEEDEE-ELQK-----KREARGVCYAFQKGECNRGASCRYSHD  155


>gi|21665845|emb|CAD36023.1|  transcription factor R18 [Craterostigma plantagineum]
Length=434

 Score = 36.6 bits (83),  Expect = 0.065
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +2

Query  443  YKRNRAHVCSFYARGECTRGAECPYRHEMPV  535
            Y RN+  +C +YA+G C  G  C Y HE+PV
Sbjct  403  YVRNQ--ICRYYAQGRCHFGDRCKYLHELPV  431


>gi|116061687|emb|CAL52405.1|  Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) 
(ISS) [Ostreococcus tauri]
Length=401

 Score = 35.0 bits (79),  Expect = 0.19
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
 Frame = +2

Query  467  CSFYARGECTRGAECPYRHEM  529
            C F+ARG C  G  CP+RH++
Sbjct  256  CRFFARGRCKAGKRCPFRHDI  276


>gi|30680549|ref|NP_850540.1|  nucleic acid binding / ubiquitin-protein ligase/ zinc ion binding 
[Arabidopsis thaliana]
 gi|42572319|ref|NP_974255.1|  nucleic acid binding / ubiquitin-protein ligase/ zinc ion binding 
[Arabidopsis thaliana]
 gi|17979277|gb|AAL49864.1|  unknown protein [Arabidopsis thaliana]
 gi|24030475|gb|AAN41388.1|  unknown protein [Arabidopsis thaliana]
Length=323

 Score = 33.5 bits (75),  Expect = 0.55
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
 Frame = +2

Query  464  VCSFYARGECTRGAECPYRH  523
            +CSF A G+C RG +CP+ H
Sbjct  106  ICSFAAAGDCPRGNQCPHMH  125


>gi|31580864|dbj|BAC77536.1|  makorin ring-zinc-finger protein [Pisum sativum]
Length=82

 Score = 33.5 bits (75),  Expect = 0.55
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
 Frame = +2

Query  458  AHVCSFYARGECTRGAECPYRHE  526
            + VC FYARG C +G +C + H+
Sbjct  3    SRVCKFYARGICLKGDQCDFSHQ  25


>gi|31580860|dbj|BAC77534.1|  makorin ring-zinc-finger protein [Pisum sativum]
 gi|31580862|dbj|BAC77535.1|  makorin ring-zinc-finger protein [Pisum sativum]
 gi|31580866|dbj|BAC77537.1|  makorin ring-zinc-finger protein [Pisum sativum]
 gi|31580868|dbj|BAC77538.1|  makorin ring-zinc-finger protein [Pisum sativum]
Length=82

 Score = 33.5 bits (75),  Expect = 0.55
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
 Frame = +2

Query  458  AHVCSFYARGECTRGAECPYRHE  526
            + VC FYARG C +G +C + H+
Sbjct  3    SRVCKFYARGICLKGDQCDFSHQ  25


>gi|31559542|dbj|BAC77412.1|  makorin ring-zinc-finger protein [Pisum sativum]
 gi|33468810|dbj|BAC81564.1|  makorin RING finger protein [Pisum sativum]
Length=461

 Score = 33.5 bits (75),  Expect = 0.55
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
 Frame = +2

Query  458  AHVCSFYARGECTRGAECPYRHE  526
            + VC FYARG C +G +C + H+
Sbjct  3    SRVCKFYARGICLKGDQCDFSHQ  25


>gi|15232729|ref|NP_190296.1|  RNA binding / nucleic acid binding [Arabidopsis thaliana]
 gi|6522593|emb|CAB61958.1|  putative RNA binding protein [Arabidopsis thaliana]
 gi|27311733|gb|AAO00832.1|  putative RNA-binding protein [Arabidopsis thaliana]
 gi|34098859|gb|AAQ56812.1|  At3g47120 [Arabidopsis thaliana]
Length=352

 Score = 33.5 bits (75),  Expect = 0.55
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
 Frame = +2

Query  368  IDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRHE  526
            +D+  +Y K    D   + Q       R    VC  + RGECTRG  C + H+
Sbjct  109  VDHCGAYKKHEEEDEETRRQN------REARGVCRAFQRGECTRGDSCKFSHD  155


 Score = 32.3 bits (72),  Expect = 1.2
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
 Frame = +2

Query  332  FAEEHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAEC  511
            F+ +  R A  G  +E        +D             R    VC  + RGECTRG  C
Sbjct  152  FSHDEKRAANTGWGHEEDRSSKWDHDK-----------NREGRGVCRAFQRGECTRGDSC  200

Query  512  PYRHE  526
             + H+
Sbjct  201  KFSHD  205


>gi|116000425|emb|CAL50105.1|  FOG: RRM domain (ISS) [Ostreococcus tauri]
Length=462

 Score = 33.1 bits (74),  Expect = 0.72
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = +2

Query  464  VCSFYARGECTRGAECPYRHEMP  532
            VC  +ARG CT GA C Y H +P
Sbjct  240  VCVHFARGCCTVGAACEYLHRLP  262


>gi|79330593|ref|NP_001032059.1|  nucleic acid binding [Arabidopsis thaliana]
 gi|12057166|emb|CAC19848.1|  zfwd2 protein [Arabidopsis thaliana]
Length=443

 Score = 32.7 bits (73),  Expect = 0.94
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
 Frame = +2

Query  380  SSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            SS+G+   N T+ K ++           VC+F+  G CT G +C Y H
Sbjct  97   SSWGRFGGNRTVTKTEK-----------VCNFWVDGNCTYGDKCRYLH  133


>gi|15242242|ref|NP_200011.1|  nucleic acid binding [Arabidopsis thaliana]
 gi|10177733|dbj|BAB11046.1|  unnamed protein product [Arabidopsis thaliana]
Length=437

 Score = 32.7 bits (73),  Expect = 0.94
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
 Frame = +2

Query  380  SSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            SS+G+   N T+ K ++           VC+F+  G CT G +C Y H
Sbjct  97   SSWGRFGGNRTVTKTEK-----------VCNFWVDGNCTYGDKCRYLH  133


>gi|92891630|gb|ABE90894.1|  Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative [Medicago 
truncatula]
Length=357

 Score = 32.3 bits (72),  Expect = 1.2
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 0/20 (0%)
 Frame = +2

Query  464  VCSFYARGECTRGAECPYRH  523
            +CSF A G C RG +CP+ H
Sbjct  140  ICSFAAAGNCPRGEQCPHVH  159


 Score = 30.0 bits (66),  Expect = 6.1
 Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 0/21 (0%)
 Frame = +2

Query  461  HVCSFYARGECTRGAECPYRH  523
            ++C+FY +G C  G+ C Y H
Sbjct  33   NICTFYQKGVCAYGSRCRYDH  53


>gi|115462379|ref|NP_001054789.1|  Os05g0176400 [Oryza sativa (japonica cultivar-group)]
 gi|50511420|gb|AAT77343.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113578340|dbj|BAF16703.1|  Os05g0176400 [Oryza sativa (japonica cultivar-group)]
Length=493

 Score = 32.3 bits (72),  Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query  458  AHVCSFYARGECTRGAECPYRHEMPVT  538
            A+ C FY    C++G  CPY HE P+T
Sbjct  94   ANPCYFYYNSHCSKGDNCPYLHE-PLT  119


>gi|115488132|ref|NP_001066553.1|  Os12g0272100 [Oryza sativa (japonica cultivar-group)]
 gi|77554608|gb|ABA97404.1|  hypothetical protein LOC_Os12g17370 [Oryza sativa (japonica cultivar-group)]
 gi|113649060|dbj|BAF29572.1|  Os12g0272100 [Oryza sativa (japonica cultivar-group)]
Length=204

 Score = 32.3 bits (72),  Expect = 1.2
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 0/48 (0%)
 Frame = -2

Query  449  FCNKVSSFEALKWCHLDAPFHTKTHNLCQL*PCGHALLQSTPYSHRSS  306
            +C K+   ++L++CH+       T++       GH  L S  Y HRS+
Sbjct  79   YCKKLGKLKSLEYCHVAGIVTGLTNSPLMSLSSGHITLSSAKYEHRSN  126


>gi|115469816|ref|NP_001058507.1|  Os06g0704300 [Oryza sativa (japonica cultivar-group)]
 gi|53791927|dbj|BAD54049.1|  zinc finger protein-like [Oryza sativa (japonica cultivar-group)]
 gi|113596547|dbj|BAF20421.1|  Os06g0704300 [Oryza sativa (japonica cultivar-group)]
Length=390

 Score = 32.3 bits (72),  Expect = 1.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 0/34 (0%)
 Frame = +2

Query  455  RAHVCSFYARGECTRGAECPYRHEMPVTGELSQQ  556
            R  +C  + RG C  GA+C Y H  P   +  QQ
Sbjct  4    RQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQ  37


>gi|116056815|emb|CAL53104.1|  Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
Length=414

 Score = 32.0 bits (71),  Expect = 1.6
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query  401  PNDTILKLQRTTPYYKRNRAHVCSFYARGE--CTRGAECPYRHEMPVTGELSQ  553
            P +   K + T  Y  R +   C F+  G+  C  G  C Y H    TGEL +
Sbjct  330  PRNADEKKEMTEAYLARMKKIPCRFFDGGDGTCPFGTSCFYEHRYRATGELEE  382


>gi|115467812|ref|NP_001057505.1|  Os06g0318700 [Oryza sativa (japonica cultivar-group)]
 gi|54290513|dbj|BAD61579.1|  putative makorin RING finger protein [Oryza sativa (japonica 
cultivar-group)]
 gi|54290921|dbj|BAD61603.1|  putative makorin RING finger protein [Oryza sativa (japonica 
cultivar-group)]
 gi|113595545|dbj|BAF19419.1|  Os06g0318700 [Oryza sativa (japonica cultivar-group)]
Length=368

 Score = 31.6 bits (70),  Expect = 2.1
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
 Frame = +2

Query  461  HVCSFYARGECTRGAECPYRH  523
            +VC+FY +G C+ G+ C Y H
Sbjct  34   NVCTFYQKGSCSYGSRCRYDH  54


 Score = 30.0 bits (66),  Expect = 6.1
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
 Frame = +2

Query  464  VCSFYARGECTRGAECPYRH  523
            +CSF A G C  G ECP  H
Sbjct  152  ICSFAAGGNCPYGEECPQMH  171


>gi|15241045|ref|NP_200391.1|  unknown protein [Arabidopsis thaliana]
 gi|9758614|dbj|BAB09247.1|  unnamed protein product [Arabidopsis thaliana]
Length=578

 Score = 31.6 bits (70),  Expect = 2.1
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
 Frame = +2

Query  14   DGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKTEVCQ  193
            DG E SD P  CE C G    V+      DK+ K         R    RD + +K   C 
Sbjct  505  DGKEASDKPYWCEICEGKIEVVKEKANSGDKKKK---------RLPTNRDKKERKIYKCN  555

Query  194  TCC  202
             CC
Sbjct  556  DCC  558


>gi|115450259|ref|NP_001048730.1|  Os03g0112700 [Oryza sativa (japonica cultivar-group)]
 gi|113547201|dbj|BAF10644.1|  Os03g0112700 [Oryza sativa (japonica cultivar-group)]
Length=707

 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query  428  RTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            R+TP  +  R  +C F+  G C +GA C Y H
Sbjct  676  RSTPRGQTQRG-ICKFHENGYCRKGASCNYLH  706


>gi|108705818|gb|ABF93613.1|  Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=815

 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query  428  RTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            R+TP  +  R  +C F+  G C +GA C Y H
Sbjct  784  RSTPRGQTQRG-ICKFHENGYCRKGASCNYLH  814


>gi|108705817|gb|ABF93612.1|  Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=831

 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query  428  RTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            R+TP  +  R  +C F+  G C +GA C Y H
Sbjct  800  RSTPRGQTQRG-ICKFHENGYCRKGASCNYLH  830


>gi|92887662|gb|ABE88990.1|  Zinc finger, CCCH-type [Medicago truncatula]
Length=317

 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 0/35 (0%)
 Frame = +2

Query  419  KLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            K +R  P   +    VC  Y RG C RG  C + H
Sbjct  90   KARRRDPLRYQYSGEVCPDYRRGNCDRGEACEFSH  124


>gi|92886935|gb|ABE88541.1|  Tropomyosin; Zinc finger, CCCH-type [Medicago truncatula]
Length=892

 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 0/22 (0%)
 Frame = +2

Query  458  AHVCSFYARGECTRGAECPYRH  523
            A +C+F+A+G C RG+ C + H
Sbjct  451  AIICAFFAKGWCIRGSSCSFLH  472


>gi|6424830|gb|AAF08165.1|  NADH dehydrogenase subunit F [Rhododendron mucronulatum]
Length=702

 Score = 31.2 bits (69),  Expect = 2.7
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 0/41 (0%)
 Frame = -3

Query  409  VIWTHLSIRRLIIYASSSPAVMLFCKVLPIHIALRDSVIGI  287
            + + H S +++ +Y   S  ++LFC +L I  AL   VIGI
Sbjct  519  ITFNHFSNKKIFLYPYESDNIILFCLLLLILFALFVGVIGI  559


>gi|92886427|gb|ABE88317.1|  TIR; Disease resistance protein; AAA ATPase [Medicago truncatula]
 gi|92894292|gb|ABE92146.1|  TIR; Disease resistance protein; AAA ATPase [Medicago truncatula]
Length=811

 Score = 30.8 bits (68),  Expect = 3.6
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
 Frame = -3

Query  388  IRRLIIYASSSPAVMLFCKVLPIHIALRDSVIGIDSQGSVPNLNRQPILKIQEADLAHIF  209
            + R + YAS  P  ++      +  +++DS+  +D    +PN   Q ILK+    L    
Sbjct  373  LNRALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVSYDSLEKEE  432

Query  208  QFTACLADLCLFVSCITAWPPSENCKWP  125
            Q +  L   C F          + CKWP
Sbjct  433  Q-SVFLDIACCF----------KGCKWP  449


>gi|18403134|ref|NP_565758.1|  ZFN2 (ZINC FINGER PROTEIN 2); nucleic acid binding [Arabidopsis 
thaliana]
 gi|62901127|sp|O48772|ZFN2_ARATH  Zinc finger CCCH domain-containing protein ZFN2
 gi|4928919|gb|AAD33770.1|AF138744_1  zinc finger protein 2 [Arabidopsis thaliana]
 gi|2702272|gb|AAB91975.1|  expressed protein [Arabidopsis thaliana]
Length=453

 Score = 30.8 bits (68),  Expect = 3.6
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query  377  ESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYAR-GECTRGAECPYRHEM  529
            E ++ +++ N+    +++++PY  R     C F+ R G+C  G  C Y H +
Sbjct  22   EDTFRRMKVNED--NMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPL  71


>gi|6562264|emb|CAB62634.1|  putative protein [Arabidopsis thaliana]
Length=1247

 Score = 30.0 bits (66),  Expect = 6.1
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
 Frame = +2

Query  464   VCSFYARGECTRGAECPYRH  523
             +C FY  G C RGA C + H
Sbjct  1227  ICKFYESGYCKRGASCSFWH  1246


>gi|30693413|ref|NP_190681.2|  nucleic acid binding / protein binding / zinc ion binding [Arabidopsis 
thaliana]
Length=1230

 Score = 30.0 bits (66),  Expect = 6.1
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
 Frame = +2

Query  464   VCSFYARGECTRGAECPYRH  523
             +C FY  G C RGA C + H
Sbjct  1210  ICKFYESGYCKRGASCSFWH  1229


>gi|115440885|ref|NP_001044722.1|  Os01g0834700 [Oryza sativa (japonica cultivar-group)]
 gi|113534253|dbj|BAF06636.1|  Os01g0834700 [Oryza sativa (japonica cultivar-group)]
Length=428

 Score = 29.6 bits (65),  Expect = 8.0
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
 Frame = +2

Query  464  VCSFYARGECTRGAECPYRHEMPV  535
            VC F+  G+C +G +C + H++ V
Sbjct  157  VCEFFKVGQCQKGFKCKFSHDLNV  180


>gi|37718753|gb|AAR01625.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=397

 Score = 29.6 bits (65),  Expect = 8.0
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
 Frame = -2

Query  446  CNKVSSFEALKWCHLDAPF--------HTKTHNLCQL*P  354
            C  VS++   +W H  +P         H K HNLCQL P
Sbjct  323  CKFVSAWHLPRWRHAGSPSLMGSDIFKHIKKHNLCQLIP  361


>gi|22327900|ref|NP_200500.2|  nucleic acid binding [Arabidopsis thaliana]
Length=404

 Score = 29.6 bits (65),  Expect = 8.0
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = +2

Query  311  SDVNREYFAEEHDRRARAGIDYESSYGKVR-----PNDTILKLQRTTPYYKRNRAHVC-S  472
            SD + +Y+  +  +R ++G   E    K       P       Q      ++ R  VC  
Sbjct  92   SDSDSQYWRYDVPKRQKSGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLD  151

Query  473  FYARGECTRGAECPYRHE  526
               +G+C +G EC Y+HE
Sbjct  152  LIIKGKCEKGPECSYKHE  169


>gi|6634767|gb|AAF19747.1|AC009917_6  Contains similarity to gb|U96448 cleavage and polyadenylation 
specificity factor 30 kDa from Bos taurus. [Arabidopsis thaliana]
 gi|24415582|gb|AAN41459.1|  putative cleavage and polyadenylation specificity factor 30 kDa 
subunit [Arabidopsis thaliana]
Length=250

 Score = 29.6 bits (65),  Expect = 8.0
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
 Frame = +2

Query  386  YGKVRPNDTILKLQRTTPYYKRNRAHVCSFYARGECTRGAECPYRH  523
            YG+ R  D + K       +       C+ Y  G C  G +C YRH
Sbjct  100  YGECREQDCVYK-------HTNEDIKECNMYKLGFCPNGPDCRYRH  138
Distribution of 60 Blast Hits on the Query Sequence
