Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937535-2375-4995139547.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig103 Length=499
Score E Sequences producing significant alignments: (Bits) Value gi|42572143|ref|NP_974162.1| unknown protein [Arabidopsis tha... 40.0 0.004 gi|30699270|ref|NP_177881.2| unknown protein [Arabidopsis tha... 40.0 0.004 gi|115489834|ref|NP_001067404.1| Os12g0641500 [Oryza sativa (... 37.7 0.021 gi|27227801|emb|CAD59409.1| SMC1 protein [Oryza sativa] 37.7 0.021 gi|30688103|ref|NP_683323.2| unknown protein [Arabidopsis thalia 35.0 0.14 gi|26452063|dbj|BAC43121.1| unknown protein [Arabidopsis thal... 35.0 0.14 gi|115434732|ref|NP_001042124.1| Os01g0167900 [Oryza sativa (... 34.7 0.18 gi|92897947|gb|ABE93965.1| IMP dehydrogenase/GMP reductase [Medi 33.9 0.30 gi|92886054|gb|ABE88074.1| Zinc knuckle, putative [Medicago trun 33.9 0.30 gi|13518400|ref|NP_084759.1| Ycf1 protein [Oenothera elata su... 33.9 0.30 gi|5263333|gb|AAD41435.1|AC007727_24 F8K7.24 [Arabidopsis thalia 33.5 0.40 gi|6552748|gb|AAF16547.1|AC013482_21 T26F17.2 [Arabidopsis thali 33.5 0.40 gi|15219095|ref|NP_173599.1| unknown protein [Arabidopsis thalia 33.5 0.40 gi|115466588|ref|NP_001056893.1| Os06g0163000 [Oryza sativa (... 32.7 0.68 gi|15241014|ref|NP_195777.1| unknown protein [Arabidopsis tha... 32.3 0.89 gi|11467779|ref|NP_050830.1| ATP synthase CF0 B chain [Nephro... 32.3 0.89 gi|116060285|emb|CAL55621.1| Myosin class II heavy chain (ISS) [ 32.0 1.2 gi|116058205|emb|CAL53394.1| unnamed protein product [Ostreococc 32.0 1.2 gi|30698765|ref|NP_177248.3| DNA binding / transcription fact... 30.0 1.4 gi|62320248|dbj|BAD94516.1| putative protein [Arabidopsis thalia 31.6 1.5 gi|115446227|ref|NP_001046893.1| Os02g0497500 [Oryza sativa (... 31.6 1.5 gi|15237400|ref|NP_197175.1| unknown protein [Arabidopsis tha... 31.6 1.5 gi|70663502|emb|CAJ15150.1| sialyltransferase-like protein [Medi 31.6 1.5 gi|51969890|dbj|BAD43637.1| hypothetical protein [Arabidopsis th 31.6 1.5 gi|15233233|ref|NP_188213.1| unknown protein [Arabidopsis tha... 31.6 1.5 gi|115477617|ref|NP_001062404.1| Os08g0544300 [Oryza sativa (... 31.2 2.0 gi|110741835|dbj|BAE98860.1| putative pre-mRNA splicing facto... 31.2 2.0 gi|110737251|dbj|BAF00573.1| putative nuclear matrix constitu... 31.2 2.0 gi|92893109|gb|ABE91623.1| Prefoldin [Medicago truncatula] 31.2 2.0 gi|92867387|gb|ABE77697.1| AAA ATPase, central region; 26S pr... 31.2 2.0 gi|62319196|dbj|BAD94379.1| TRANSLATION INITIATION FACTOR 3 S... 31.2 2.0 gi|79328836|ref|NP_001031954.1| TIF3B1 (EUKARYOTIC TRANSLATIO... 31.2 2.0 gi|15242617|ref|NP_195926.1| unknown protein [Arabidopsis tha... 31.2 2.0 gi|18391490|ref|NP_563924.1| unknown protein [Arabidopsis tha... 31.2 2.0 gi|115445841|ref|NP_001046700.1| Os02g0325100 [Oryza sativa (... 31.2 2.0 gi|11994111|dbj|BAB01114.1| CASP protein-like; CCAAT displace... 31.2 2.0 gi|18401903|ref|NP_566611.1| unknown protein [Arabidopsis tha... 31.2 2.0 gi|18421140|ref|NP_568498.1| TIF3B1 (EUKARYOTIC TRANSLATION I... 31.2 2.0 gi|116831585|gb|ABK28745.1| unknown [Arabidopsis thaliana] 30.8 2.6 gi|15236607|ref|NP_194111.1| transcription factor [Arabidopsi... 30.8 2.6 gi|15224659|ref|NP_180071.1| unknown protein [Arabidopsis tha... 30.8 2.6 gi|3702331|gb|AAC62888.1| hypothetical protein [Arabidopsis thal 30.8 2.6 gi|17380674|gb|AAL36167.1| putative kinesin calmodulin-bindin... 30.8 2.6 gi|30690248|ref|NP_850447.1| unknown protein [Arabidopsis tha... 30.8 2.6 gi|30680753|ref|NP_850940.1| sialyltransferase/ transferase, ... 30.8 2.6 gi|10130006|gb|AAG13460.1|AF223412_1 kinesin-like calmodulin bin 30.8 2.6 gi|9802576|gb|AAF99778.1|AC003981_28 F22O13.14 [Arabidopsis thal 30.8 2.6 gi|2586157|gb|AAC49901.1| kinesin-like calmodulin-binding protei 30.8 2.6 gi|30680757|ref|NP_172342.3| sialyltransferase [Arabidopsis thal 30.8 2.6 gi|30698168|ref|NP_851276.1| ZWI (ZWICHEL); calmodulin bindin... 30.8 2.6 gi|84468446|dbj|BAE71306.1| putative myosin heavy chain-like pro 30.8 2.6 gi|30698170|ref|NP_569022.2| ZWI (ZWICHEL); calmodulin bindin... 30.8 2.6 gi|15237425|ref|NP_199444.1| unknown protein [Arabidopsis tha... 30.8 2.6 gi|1237102|gb|AAC37475.1| calmodulin-binding protein >gi|1589... 30.8 2.6 gi|116057804|emb|CAL54007.1| Myosin class II heavy chain (ISS) [ 30.4 3.4 gi|115460394|ref|NP_001053797.1| Os04g0605900 [Oryza sativa (... 30.4 3.4 gi|34148082|gb|AAQ62591.1| hypothetical protein [Glycine max] 30.4 3.4 gi|32487724|emb|CAE05401.1| OSJNBa0022F16.25 [Oryza sativa (japo 30.4 3.4 gi|38346542|emb|CAE02124.2| OSJNBa0035M09.3 [Oryza sativa (ja... 30.4 3.4 gi|7529281|emb|CAB86633.1| putative protein [Arabidopsis thalian 30.4 3.4 gi|14423540|gb|AAK62452.1|AF387007_1 Similar to Synechocystis... 30.4 3.4 gi|22326769|ref|NP_196830.2| unknown protein [Arabidopsis tha... 30.4 3.4 gi|15230975|ref|NP_188620.1| DNA binding / transcription fact... 30.4 3.4 gi|7769873|gb|AAF69551.1|AC008007_26 F12M16.11 [Arabidopsis thal 30.4 3.4 gi|2194131|gb|AAB61106.1| Similar to Synechocystis antiviral ... 30.4 3.4 gi|42571039|ref|NP_973593.1| unknown protein [Arabidopsis thalia 30.4 3.4 gi|42562724|ref|NP_175728.2| unknown protein [Arabidopsis thalia 30.4 3.4 gi|15223032|ref|NP_177164.1| PDE317; ATP binding / ATP-depend... 30.4 3.4 gi|83318984|emb|CAJ44461.1| sialyltransferase like protein [A... 30.4 3.4 gi|15235748|ref|NP_195507.1| AGL21; transcription factor [Ara... 30.4 3.4 gi|79313299|ref|NP_001030729.1| DNA binding [Arabidopsis thal... 30.4 3.4 gi|115450183|ref|NP_001048692.1| Os03g0107400 [Oryza sativa (... 30.0 4.4 gi|115445897|ref|NP_001046728.1| Os02g0433100 [Oryza sativa (... 30.0 4.4 gi|92896368|gb|ABE93168.1| Prefoldin; Helix-loop-helix DNA-bindi 30.0 4.4 gi|15233020|ref|NP_186943.1| unknown protein [Arabidopsis tha... 30.0 4.4 gi|24476034|gb|AAN62776.1| Putative kinesin-related protein [... 30.0 4.4 gi|29028870|gb|AAO64814.1| At5g06710 [Arabidopsis thaliana] 30.0 4.4 gi|30678214|ref|NP_171697.3| ATP binding / microtubule motor [Ar 30.0 4.4 gi|115445901|ref|NP_001046730.1| Os02g0433600 [Oryza sativa (... 30.0 4.4 gi|116831447|gb|ABK28676.1| unknown [Arabidopsis thaliana] 29.6 5.8 gi|115454903|ref|NP_001051052.1| Os03g0710900 [Oryza sativa (... 29.6 5.8 gi|110737622|dbj|BAF00752.1| hypothetical protein [Arabidopsis t 29.6 5.8 gi|108710713|gb|ABF98508.1| expressed protein [Oryza sativa (jap 29.6 5.8 gi|92897361|gb|ABE93633.1| Structural maintenance of chromoso... 29.6 5.8 gi|92886759|gb|ABE88477.1| RNA-binding region RNP-1 (RNA reco... 29.6 5.8 gi|4218005|gb|AAD12213.1| putative vicilin storage protein (g... 29.6 5.8 gi|62733538|gb|AAX95655.1| CASP C terminal, putative [Oryza s... 29.6 5.8 gi|86129718|gb|ABC86568.1| homeodomain-leucine zipper transcr... 29.6 5.8 gi|42569129|ref|NP_179444.2| nutrient reservoir [Arabidopsis tha 29.6 5.8 gi|30697347|ref|NP_200829.2| unknown protein [Arabidopsis thalia 29.6 5.8 gi|22328978|ref|NP_680744.1| unknown protein [Arabidopsis thalia 29.6 5.8 gi|86439723|emb|CAJ19339.1| hypothetical protein [Triticum aesti 29.6 5.8 gi|15232439|ref|NP_190985.1| ATFIP37 (ARABIDOPSIS THALIANA FK... 29.6 5.8 gi|8099128|dbj|BAA90500.1| unnamed protein product [Oryza sativa 29.6 5.8 gi|8885572|dbj|BAA97502.1| myosin heavy chain-like [Arabidopsis 29.6 5.8 gi|115440159|ref|NP_001044359.1| Os01g0767000 [Oryza sativa (... 29.6 5.8 gi|92879619|gb|ABE85638.1| RNA-directed DNA polymerase (Rever... 29.3 7.5 gi|92878843|gb|ABE85247.1| Exocyst complex component Sec6 [Medic 29.3 7.5 gi|89257453|gb|ABD64945.1| homeobox-leucine zipper protein, puta 29.3 7.5 gi|89257493|gb|ABD64984.1| homeobox-leucine zipper protein, puta 29.3 7.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 360 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 499 Length of database: 101054579 Length adjustment: 105 Effective length of query: 394 Effective length of database: 71302934 Effective search space: 4349478974 Effective search space used: 4349478974 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)