RID=1168937807-22491-165860721360.BLASTQ1, Contig108

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168937807-22491-165860721360.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig108
Length=518

Distribution of 15 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18395487|ref|NP_565294.1|  D-alanyl-D-alanine endopeptidase...   169    7e-42 
gi|21593273|gb|AAM65222.1|  unknown [Arabidopsis thaliana]          169    7e-42 
gi|115443813|ref|NP_001045686.1|  Os02g0117400 [Oryza sativa (...   163    4e-40 
gi|115464097|ref|NP_001055648.1|  Os05g0436400 [Oryza sativa (...  91.7    1e-18 
gi|88683150|emb|CAJ77509.1|  putative aspartic protease A22B [Sol  89.7    5e-18
gi|51535406|dbj|BAD37276.1|  hypothetical protein [Oryza sativa (  57.8    2e-08
gi|116059774|emb|CAL55481.1|  unnamed protein product [Ostreococc  49.3    8e-06
gi|117573699|gb|ABK41009.1|  auxin/indole-3-acetic acid [Solanum   31.2    2.2  
gi|9294507|dbj|BAB02612.1|  unnamed protein product [Arabidopsis   30.8    2.8  
gi|116056924|emb|CAL53213.1|  intramembrane protease, putative (I  29.6    6.3  
gi|92899052|gb|ABE94518.1|  C2 [Medicago truncatula]               29.6    6.3  
gi|1389768|gb|AAB02913.1|  phosphoribosylanthranilate transfer...  29.6    6.3  
gi|15238711|ref|NP_197300.1|  TRP1 (TRYPTOPHAN BIOSYNTHESIS 1)...  29.6    6.3   
gi|115456299|ref|NP_001051750.1|  Os03g0824300 [Oryza sativa (...  29.3    8.3   
gi|27545034|gb|AAO18440.1|  putative RNA-binding protein [Oryz...  29.3    8.3

Alignments

 

>gi|18395487|ref|NP_565294.1|  D-alanyl-D-alanine endopeptidase [Arabidopsis thaliana]
 gi|3548818|gb|AAC34490.1|  expressed protein [Arabidopsis thaliana]
 gi|17473842|gb|AAL38345.1|  unknown protein [Arabidopsis thaliana]
 gi|21386973|gb|AAM47890.1|  unknown protein [Arabidopsis thaliana]
Length=344

 Score =  169 bits (427),  Expect = 7e-42
 Identities = 113/147 (76%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = +1

Query  79   MKNTERlanlalagltlaplaVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA  258
            MKN ER ANLALAGLTLAPL V+V+PNLNVILTAC+TVYVGC+RSVK TPP+ETMS EHA
Sbjct  1    MKNCERFANLALAGLTLAPLVVRVNPNLNVILTACITVYVGCFRSVKDTPPTETMSKEHA  60

Query  259  MRFPFVGSAMllslfllfkflskDLVNAVLTCYFFVLGIIALSATILPAIKRFLPKHWNE  438
            MRFP VGSAMLLSLFLLFKFLSKDLVNAVLT YFFVLGI+ALSAT+LPAI+RFLP  WN+
Sbjct  61   MRFPLVGSAMLLSLFLLFKFLSKDLVNAVLTAYFFVLGIVALSATLLPAIRRFLPNPWND  120

Query  439  DLIIWRF-HLSLFGDRFTRSQIGAANP  516
            +LI+WRF +       FT+SQ+ A  P
Sbjct  121  NLIVWRFPYFKSLEVEFTKSQVVAGIP  147


>gi|21593273|gb|AAM65222.1|  unknown [Arabidopsis thaliana]
Length=344

 Score =  169 bits (427),  Expect = 7e-42
 Identities = 113/147 (76%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = +1

Query  79   MKNTERlanlalagltlaplaVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA  258
            MKN ER ANLALAGLTLAPL V+V+PNLNVILTAC+TVYVGC+RSVK TPP+ETMS EHA
Sbjct  1    MKNCERFANLALAGLTLAPLVVRVNPNLNVILTACITVYVGCFRSVKDTPPTETMSKEHA  60

Query  259  MRFPFVGSAMllslfllfkflskDLVNAVLTCYFFVLGIIALSATILPAIKRFLPKHWNE  438
            MRFP VGSAMLLSLFLLFKFLSKDLVNAVLT YFFVLGI+ALSAT+LPAI+RFLP  WN+
Sbjct  61   MRFPLVGSAMLLSLFLLFKFLSKDLVNAVLTAYFFVLGIVALSATLLPAIRRFLPNPWND  120

Query  439  DLIIWRF-HLSLFGDRFTRSQIGAANP  516
            +LI+WRF +       FT+SQ+ A  P
Sbjct  121  NLIVWRFPYFKSLEVEFTKSQVVAGIP  147


>gi|115443813|ref|NP_001045686.1|  Os02g0117400 [Oryza sativa (japonica cultivar-group)]
 gi|41052834|dbj|BAD07725.1|  putative minor histocompatibility antigen H13 isoform 1 [Oryza 
sativa (japonica cultivar-group)]
 gi|113535217|dbj|BAF07600.1|  Os02g0117400 [Oryza sativa (japonica cultivar-group)]
Length=343

 Score =  163 bits (412),  Expect = 4e-40
 Identities = 113/148 (76%), Positives = 125/148 (84%), Gaps = 3/148 (2%)
 Frame = +1

Query  79   MKNTERlanlalagltlaplaVKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA  258
            MK  ER ANLALAGL+LAPL VKV+PN+NVILTACL VYVGCYRSVKPTPPSETMS EHA
Sbjct  1    MKTHERAANLALAGLSLAPLVVKVEPNVNVILTACLAVYVGCYRSVKPTPPSETMSKEHA  60

Query  259  MRFPFVGSAMllslfllfkflskDLVNAVLTCYFFVLGIIALSATILPAIKRFLPKHWNE  438
            MRFP VGSAMLLSLFLLFKFLSKDLVNAVLT YFF+LGI AL AT+LP+IKRFLPK WN+
Sbjct  61   MRFPLVGSAMLLSLFLLFKFLSKDLVNAVLTAYFFILGIAALCATLLPSIKRFLPKEWND  120

Query  439  DLIIW--RFHLSLFGDRFTRSQIGAANP  516
            + I+W   F  SL    FT+SQ+ A+ P
Sbjct  121  NAIVWCAPFFHSL-SVEFTKSQVVASIP  147


>gi|115464097|ref|NP_001055648.1|  Os05g0436400 [Oryza sativa (japonica cultivar-group)]
 gi|49328189|gb|AAT58885.1|  putative signal peptide peptidase [Oryza sativa (japonica cultivar-group)]
 gi|55733797|gb|AAV59304.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113579199|dbj|BAF17562.1|  Os05g0436400 [Oryza sativa (japonica cultivar-group)]
Length=283

 Score = 91.7 bits (226),  Expect = 1e-18
 Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 7/90 (7%)
 Frame = +1

Query  259  MRFPFVGSAMllslfllfkflskDLVNAVLTCYFFVLGIIALSATILPAIKRFLPKHWNE  438
            MRFP VGSAMLLSLFLLFKFLSKDLVN VLT YFF+LGI AL AT+LP+IKRFLPK WN+
Sbjct  1    MRFPLVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFILGIAALCATLLPSIKRFLPKEWND  60

Query  439  DLIIWR---FH-LSLFGDRFTRSQIGAANP  516
            + I+WR   FH LS+    FTRSQ+ A+ P
Sbjct  61   NAIVWRAPLFHSLSV---EFTRSQVVASIP  87


>gi|88683150|emb|CAJ77509.1|  putative aspartic protease A22B [Solanum tuberosum]
Length=189

 Score = 89.7 bits (221),  Expect = 5e-18
 Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = +1

Query  328  DLVNAVLTCYFFVLGIIALSATILPAIKRFLPKHWNEDLIIWRF-HLSLFGDRFTRSQIG  504
            DLVNAVLTCYFFVLGI A SAT+LP+IKRFLP+ WNEDLIIW F +       FTRSQI 
Sbjct  4    DLVNAVLTCYFFVLGIAAFSATLLPSIKRFLPEKWNEDLIIWHFPYFRSLEFEFTRSQIV  63

Query  505  AANP  516
            AA P
Sbjct  64   AAIP  67


>gi|51535406|dbj|BAD37276.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=249

 Score = 57.8 bits (138),  Expect = 2e-08
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 3/42 (7%)
 Frame = +1

Query  328  DLVNAVLTCYFFVLGIIALSATILPAIKRFLPKHWNEDLIIW  453
            DLVNAVLT    +LGI AL AT+LP+ KRFLPK WN++ IIW
Sbjct  57   DLVNAVLTA---ILGIAALCATLLPSTKRFLPKEWNDNAIIW  95


>gi|116059774|emb|CAL55481.1|  unnamed protein product [Ostreococcus tauri]
Length=665

 Score = 49.3 bits (116),  Expect = 8e-06
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = +1

Query  142  VKVDPNLNVILTACLTVYVGCYRSVKPTPP--SETMSNEHAMRFPFVGSAMllslfllfk  315
            +++DPN+ ++L + L V  G YRSV        E M+   A +FP +GS +L+S FL FK
Sbjct  37   IEIDPNVQIVLVSTLCVIAGAYRSVPIARDGGGEVMTKGDAQKFPLLGSCVLVSAFLAFK  96

Query  316  flskDLVNAVLTCYFFVLGIIALSATILPAIKRFLPK  426
            FL K  ++  ++ YF  LG++++   + P +   L K
Sbjct  97   FLPKSWLDYAVSAYFGALGLVSIGGVLTPVVHGILFK  133


>gi|117573699|gb|ABK41009.1|  auxin/indole-3-acetic acid [Solanum tuberosum]
Length=213

 Score = 31.2 bits (69),  Expect = 2.2
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 0/48 (0%)
 Frame = -1

Query  371  PSTKK*HVNTALTKSFDKNLNSKKSDNSIALPTKGKRIACSLDIVSDG  228
            P TK   V     +SF KN+ S+K +N++ +  KG++    + +  DG
Sbjct  57   PPTKAQVVGWPPVRSFRKNIMSQKGNNNVEISEKGEKTIAFVKVSMDG  104


>gi|9294507|dbj|BAB02612.1|  unnamed protein product [Arabidopsis thaliana]
Length=187

 Score = 30.8 bits (68),  Expect = 2.8
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
 Frame = -3

Query  231  WWSWLDRSIAANIYCEACSQDNI*VGVYLHSKWCQCQP  118
            +WS  D     N+ C + SQ  I VGV  H  WC+  P
Sbjct  121  FWSKTD-----NLSCRSSSQTKIPVGVERHHPWCRATP  153


>gi|116056924|emb|CAL53213.1|  intramembrane protease, putative (ISS) [Ostreococcus tauri]
Length=507

 Score = 29.6 bits (65),  Expect = 6.3
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = +1

Query  178  ACLTVYVGCYRSVKPTPPSETMSNEHAMRFPFVGSAMllslfllfkflskDLVNAVLTCY  357
            A L++Y+G +R++      ET+S E ++  P   S  L +++   + L  DL  AV+  Y
Sbjct  111  ATLSIYIGSHRALT-RDFRETISFESSLAAPVALSCSLFAVYFALEVLHLDL-GAVVGTY  168

Query  358  FFVLGIIAL  384
            FFVLG I++
Sbjct  169  FFVLGAISV  177


>gi|92899052|gb|ABE94518.1|  C2 [Medicago truncatula]
Length=2216

 Score = 29.6 bits (65),  Expect = 6.3
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 16/128 (12%)
 Frame = -1

Query  407  MAGNIVAERAMIPSTKK*HVNTALTKS-----FDKNLNSKKSDNSIA-LPTKGKRIACSL  246
            +A  +VAE  ++P+T+  H  T   K+       + L+S+K +N++     +   +   +
Sbjct  827  IAKKVVAEEVILPATRVLHEGTISGKTHAAAAIARLLHSQKVNNAVIDCVNRAGTVLALI  886

Query  245  DIVSDGGVGLTDR*QPTYTVRHAVKITFKLGSTFTASGANVNPAKAKLASL--SVFFIVV  72
              +     G  D    T     A+ I  +   T    GAN+ PA A LA    S+  IV+
Sbjct  887  SFLDSSASGSVD----TSEALEALAILSRPEET----GANIKPACAVLAEFPESIRPIVL  938

Query  71   AVAYSNTT  48
             +A S  T
Sbjct  939  CIANSTPT  946


>gi|1389768|gb|AAB02913.1|  phosphoribosylanthranilate transferase
 gi|28394222|gb|AAO42464.1|  phosphorybosyl anthranilate transferase 1 [Arabidopsis thaliana]
Length=441

 Score = 29.6 bits (65),  Expect = 6.3
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = -1

Query  239  VSDGGVG--LTDR*QPTYTVRHAVKITFKLGSTFTASGANVNPAKAKLASLSVFFIVVAV  66
            V +GG+G  ++    P   +   V+   K+ + F   G  +NPA+   A + V+   + V
Sbjct  243  VEEGGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPMLNPARVSYAVVGVYHKDLVV  302

Query  65   AYSNTTASFNRIFSLSLSSC  6
              +     F    +L + SC
Sbjct  303  KMAKALQRFGMKRALVVHSC  322


>gi|15238711|ref|NP_197300.1|  TRP1 (TRYPTOPHAN BIOSYNTHESIS 1); anthranilate phosphoribosyltransferase 
[Arabidopsis thaliana]
 gi|401213|sp|Q02166|TRPD_ARATH  Anthranilate phosphoribosyltransferase, chloroplast precursor
 gi|166792|gb|AAA32835.1|  phosphoribosylanthranilate transferase
 gi|9757891|dbj|BAB08398.1|  anthranilate phosphoribosyltransferase, chloroplast precursor 
[Arabidopsis thaliana]
 gi|15450852|gb|AAK96697.1|  anthranilate phosphoribosyltransferase, chloroplast precursor 
[Arabidopsis thaliana]
 gi|20259900|gb|AAM13297.1|  anthranilate phosphoribosyltransferase, chloroplast precursor 
[Arabidopsis thaliana]
 gi|445600|prf||1909347A  phosphoribosylanthranilate transferase
Length=444

 Score = 29.6 bits (65),  Expect = 6.3
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = -1

Query  239  VSDGGVG--LTDR*QPTYTVRHAVKITFKLGSTFTASGANVNPAKAKLASLSVFFIVVAV  66
            V +GG+G  ++    P   +   V+   K+ + F   G  +NPA+   A + V+   + V
Sbjct  246  VEEGGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPMLNPARVSYAVVGVYHKDLVV  305

Query  65   AYSNTTASFNRIFSLSLSSC  6
              +     F    +L + SC
Sbjct  306  KMAKALQRFGMKRALVVHSC  325


>gi|115456299|ref|NP_001051750.1|  Os03g0824300 [Oryza sativa (japonica cultivar-group)]
 gi|113550221|dbj|BAF13664.1|  Os03g0824300 [Oryza sativa (japonica cultivar-group)]
Length=870

 Score = 29.3 bits (64),  Expect = 8.3
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 0/42 (0%)
 Frame = -1

Query  335  TKSFDKNLNSKKSDNSIALPTKGKRIACSLDIVSDGGVGLTD  210
            T++F+K    K  D S  L   GK  A  L    DGG G+ +
Sbjct  746  TRAFNKGHKRKTHDRSSKLSNSGKGSAEDLSAAGDGGSGIME  787


>gi|27545034|gb|AAO18440.1|  putative RNA-binding protein [Oryza sativa (japonica cultivar-group)]
 gi|108711831|gb|ABF99626.1|  RNA recognition motif family protein [Oryza sativa (japonica 
cultivar-group)]
Length=885

 Score = 29.3 bits (64),  Expect = 8.3
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 0/42 (0%)
 Frame = -1

Query  335  TKSFDKNLNSKKSDNSIALPTKGKRIACSLDIVSDGGVGLTD  210
            T++F+K    K  D S  L   GK  A  L    DGG G+ +
Sbjct  740  TRAFNKGHKRKTHDRSSKLSNSGKGSAEDLSAAGDGGSGIME  781

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 314
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 518
Length of database: 101054579
Length adjustment: 105
Effective length of query: 413
Effective length of database: 71302934
Effective search space: 4777296578
Effective search space used: 4777296578
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)