Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938034-2526-52967471677.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig113 Length=532
Score E Sequences producing significant alignments: (Bits) Value gi|18404840|ref|NP_565894.1| unknown protein [Arabidopsis tha... 183 1e-64 gi|115483598|ref|NP_001065469.1| Os10g0573100 [Oryza sativa (... 163 7e-60 gi|110289627|gb|AAP55119.2| expressed protein [Oryza sativa (jap 161 4e-59 gi|41052965|dbj|BAD07875.1| hypothetical protein [Oryza sativa ( 30.4 3.9 gi|116058898|emb|CAL54605.1| Armadillo/beta-Catenin/plakoglobin 29.3 8.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 387 Number of extensions: 8 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 532 Length of database: 101054579 Length adjustment: 106 Effective length of query: 426 Effective length of database: 71019585 Effective search space: 5042390535 Effective search space used: 5042390535 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)