RID=1168938772-30331-156282137529.BLASTQ4, Contig128

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938772-30331-156282137529.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig128
Length=504

Distribution of 32 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18420092|ref|NP_568389.1|  ATSUG1; ATPase [Arabidopsis thal...   153    2e-51 
gi|6599051|emb|CAB63651.1|  26S proteasome subunit 8; Tat binding   143    3e-49
gi|6652888|gb|AAF22526.1|AF123395_1  26S proteasome AAA-ATPase su   145    4e-49 
gi|115444937|ref|NP_001046248.1|  Os02g0205300 [Oryza sativa (...   142    4e-48 
gi|17385640|dbj|BAA87070.2|  TAT-binding protein homolog [Matrica   141    6e-48
gi|15241241|ref|NP_197500.1|  RPT6A; ATP binding / ATPase/ hyd...   141    8e-48 
gi|6752880|gb|AAF27916.1|AF220199_1  26S proteasome regulatory su   134    1e-46 
gi|11993907|gb|AAG42150.1|  26S proteasome RPT6a subunit [Dactyli   137    2e-46
gi|115468800|ref|NP_001057999.1|  Os06g0600100 [Oryza sativa (...   110    8e-38 
gi|32400818|gb|AAP80641.1|AF475120_1  26S proteasome ATPase subun  95.5    5e-34 
gi|116056475|emb|CAL52764.1|  26S proteasome regulatory comple...  85.9    1e-28
gi|42408790|dbj|BAD10025.1|  putative MADS-box protein [Oryza ...  35.0    0.14  
gi|115477613|ref|NP_001062402.1|  Os08g0543600 [Oryza sativa (...  32.3    0.92  
gi|115441707|ref|NP_001045133.1|  Os01g0906400 [Oryza sativa (...  30.4    3.5   
gi|6056379|gb|AAF02843.1|AC009894_14  Similar to GTP-binding prot  30.0    4.5  
gi|42562778|ref|NP_176001.2|  GTP binding [Arabidopsis thaliana]   30.0    4.5   
gi|92870338|gb|ABE79655.1|  AAA ATPase; 26S proteasome subunit...  29.6    5.9  
gi|115483300|ref|NP_001065320.1|  Os10g0550700 [Oryza sativa (...  29.3    7.8   
gi|12325359|gb|AAG52618.1|AC024261_5  cinnamyl alcohol dehydro...  29.3    7.8  
gi|30694961|ref|NP_849791.1|  unknown protein [Arabidopsis thalia  29.3    7.8   
gi|115443627|ref|NP_001045593.1|  Os02g0101900 [Oryza sativa (...  29.3    7.8

Alignments

 

>gi|18420092|ref|NP_568389.1|  ATSUG1; ATPase [Arabidopsis thaliana]
 gi|13537115|dbj|BAB40755.1|  AtSUG1 [Arabidopsis thaliana]
 gi|17473854|gb|AAL38350.1|  unknown protein [Arabidopsis thaliana]
 gi|32306505|gb|AAP78936.1|  At5g19990 [Arabidopsis thaliana]
Length=419

 Score =  153 bits (386),  Expect(2) = 2e-51
 Identities = 87/107 (81%), Positives = 95/107 (88%), Gaps = 2/107 (1%)
 Frame = +3

Query  63   MATVGIERKQPAST-EEMCTAK-SGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQ  236
            MA VG++ ++P +  EE C  K + AKQGEGL+QYYLQHIHELQ  LRQKT+NLNRLEAQ
Sbjct  1    MAAVGVDSRRPETAMEETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQ  60

Query  237  RNELNSRVRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKY
Sbjct  61   RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKY  107


 Score = 69.3 bits (168),  Expect(2) = 2e-51
 Identities = 32/36 (88%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITKITPSTRVALRNDSYVLHL+LP+KVDPLVN
Sbjct  113  KSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN  148


>gi|6599051|emb|CAB63651.1|  26S proteasome subunit 8; Tat binding protein [Fagus sylvatica]
Length=418

 Score =  143 bits (361),  Expect(2) = 3e-49
 Identities = 83/104 (79%), Positives = 90/104 (86%), Gaps = 3/104 (2%)
 Frame = +3

Query  72   VGIERKQPAST--EEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNE  245
            + IE K P +   +E C+AK  +KQGEGL+QYYLQHIHE QL +RQKTHNLNRLEAQRNE
Sbjct  1    MAIETKHPEAVPADETCSAKC-SKQGEGLKQYYLQHIHEHQLQVRQKTHNLNRLEAQRNE  59

Query  246  LNSRVRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
             NSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVH EGKY
Sbjct  60   FNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHSEGKY  103


 Score = 71.6 bits (174),  Expect(2) = 3e-49
 Identities = 34/36 (94%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            +NIDITKITPSTRVALRNDSYVLHLILP+KVDPLVN
Sbjct  109  KNIDITKITPSTRVALRNDSYVLHLILPSKVDPLVN  144


>gi|6652888|gb|AAF22526.1|AF123395_1  26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana]
Length=405

 Score =  145 bits (365),  Expect(2) = 4e-49
 Identities = 82/92 (89%), Positives = 85/92 (92%), Gaps = 1/92 (1%)
 Frame = +3

Query  105  EEMCTAK-SGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNELNSRVRMLReel  281
            EE C  K + AKQGEGL+QYYLQHIHELQ  LRQKT+NLNRLEAQRNELNSRVRMLREEL
Sbjct  2    EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREEL  61

Query  282  qllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKY
Sbjct  62   QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKY  93


 Score = 69.3 bits (168),  Expect(2) = 4e-49
 Identities = 32/36 (88%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITKITPSTRVALRNDSYVLHL+LP+KVDPLVN
Sbjct  99   KSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN  134


>gi|115444937|ref|NP_001046248.1|  Os02g0205300 [Oryza sativa (japonica cultivar-group)]
 gi|11094194|dbj|BAB17626.1|  26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza 
sativa (japonica cultivar-group)]
 gi|11991116|dbj|BAB19880.1|  26S proteasome ATPase subunit Rpt6 [Oryza sativa]
 gi|46390529|dbj|BAD16017.1|  26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza 
sativa (japonica cultivar-group)]
 gi|51536269|dbj|BAD38437.1|  26S proteasome regulatory particle triple-A ATPase subunit6 [Oryza 
sativa (japonica cultivar-group)]
 gi|113535779|dbj|BAF08162.1|  Os02g0205300 [Oryza sativa (japonica cultivar-group)]
Length=424

 Score =  142 bits (359),  Expect(2) = 4e-48
 Identities = 84/112 (75%), Positives = 93/112 (83%), Gaps = 7/112 (6%)
 Frame = +3

Query  63   MATVGIERKQP---ASTEEMCTAK----SGAKQGEGLRQYYLQHIHELQLNLRQKTHNLN  221
            MATV ++  +P   A  +E   AK    +G   GEGLRQYYLQHIH+LQL +RQKTHNLN
Sbjct  1    MATVAMDISKPPPAAGGDEAAAAKGRGGAGGGGGEGLRQYYLQHIHDLQLQIRQKTHNLN  60

Query  222  RLEAQRNELNSRVRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            RLEAQRN+LNSRVRMLREELQLLQEPGSYVGEVVKVMGK+KVLVKVHPEGKY
Sbjct  61   RLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKY  112


 Score = 68.6 bits (166),  Expect(2) = 4e-48
 Identities = 32/36 (88%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITKITPSTRVALRNDSY+LHLILP+KVDPLVN
Sbjct  118  KSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVN  153


>gi|17385640|dbj|BAA87070.2|  TAT-binding protein homolog [Matricaria chamomilla]
Length=414

 Score =  141 bits (355),  Expect(2) = 6e-48
 Identities = 78/93 (83%), Positives = 84/93 (90%), Gaps = 0/93 (0%)
 Frame = +3

Query  99   STEEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNELNSRVRMLRee  278
            S  E C++K  AK GEGLRQYYLQHIH+ QL +RQKTHNLNRLEAQRNELNSRV ML+EE
Sbjct  10   SGTESCSSKGVAKTGEGLRQYYLQHIHDAQLQVRQKTHNLNRLEAQRNELNSRVGMLKEE  69

Query  279  lqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            LQLLQEPGSYVGEVVKVMGK+KVLVKVHPEGKY
Sbjct  70   LQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKY  102


 Score = 69.3 bits (168),  Expect(2) = 6e-48
 Identities = 32/36 (88%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITKITPSTRVALRNDSYVLHL+LP+KVDPLVN
Sbjct  108  KSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN  143


>gi|15241241|ref|NP_197500.1|  RPT6A; ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ 
nucleotide binding [Arabidopsis thaliana]
 gi|14532682|gb|AAK64142.1|  putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis 
thaliana]
 gi|19310807|gb|AAL85134.1|  putative 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis 
thaliana]
 gi|21593097|gb|AAM65046.1|  26S proteasome AAA-ATPase subunit RPT6a-like protein [Arabidopsis 
thaliana]
 gi|110740531|dbj|BAE98371.1|  26S proteasome AAA-ATPase subunit RPT6a - like protein [Arabidopsis 
thaliana]
Length=419

 Score =  141 bits (356),  Expect(2) = 8e-48
 Identities = 82/107 (76%), Positives = 91/107 (85%), Gaps = 2/107 (1%)
 Frame = +3

Query  63   MATVGIERKQPAST-EEMCTAK-SGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQ  236
            MA VG+E + P +  EE C  K + AKQGEGL +YYLQH+ ELQ   R+K++NLNRLEAQ
Sbjct  1    MAAVGVEARPPVTAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQ  60

Query  237  RNELNSRVRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKY
Sbjct  61   RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKY  107


 Score = 68.6 bits (166),  Expect(2) = 8e-48
 Identities = 31/36 (86%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITK+TPSTRVALRNDSYVLHL+LP+KVDPLVN
Sbjct  113  KSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVN  148


>gi|6752880|gb|AAF27916.1|AF220199_1  26S proteasome regulatory subunit 8 [Pinus taeda]
Length=433

 Score =  134 bits (337),  Expect(2) = 1e-46
 Identities = 73/81 (90%), Positives = 78/81 (96%), Gaps = 0/81 (0%)
 Frame = +3

Query  135  KQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNELNSRVRMLReelqllqePGSYVG  314
            K GEGLRQYYLQHIH+LQL +RQKTHNLNRLEAQRN+LNS+VR LREELQLLQEPGSYVG
Sbjct  41   KHGEGLRQYYLQHIHDLQLQVRQKTHNLNRLEAQRNDLNSKVRALREELQLLQEPGSYVG  100

Query  315  EVVKVMGKNKVLVKVHPEGKY  377
            EVVKVMGK+KVLVKVHPEGKY
Sbjct  101  EVVKVMGKSKVLVKVHPEGKY  121


 Score = 71.6 bits (174),  Expect(2) = 1e-46
 Identities = 34/36 (94%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            +NIDITKITPSTRVALRNDSYVLHLILP+KVDPLVN
Sbjct  127  KNIDITKITPSTRVALRNDSYVLHLILPSKVDPLVN  162


>gi|11993907|gb|AAG42150.1|  26S proteasome RPT6a subunit [Dactylis glomerata]
Length=452

 Score =  137 bits (344),  Expect(2) = 2e-46
 Identities = 79/109 (72%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
 Frame = +3

Query  54   QDSMATVGIE-RKQPASTEEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLE  230
            +  MATV ++  K P +     +AK     GEGLRQYYLQHIH+LQL +R KTHNLNRLE
Sbjct  32   EPEMATVAMDISKPPPAAAGDDSAKGARAGGEGLRQYYLQHIHDLQLQIRTKTHNLNRLE  91

Query  231  AQRNELNSRVRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            AQRN+LNS+VR LREELQLLQEPGSYVGEVVKVMGK+KVLVKVHPEGKY
Sbjct  92   AQRNDLNSKVRALREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKY  140


 Score = 68.6 bits (166),  Expect(2) = 2e-46
 Identities = 32/36 (88%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITKITPSTRVALRNDSY+LHLILP+KVDPLVN
Sbjct  146  KSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVN  181


>gi|115468800|ref|NP_001057999.1|  Os06g0600100 [Oryza sativa (japonica cultivar-group)]
 gi|50725031|dbj|BAD32833.1|  putative 26S proteasome regulatory particle triple-A ATPase subunit6 
[Oryza sativa (japonica cultivar-group)]
 gi|50725483|dbj|BAD32954.1|  putative 26S proteasome regulatory particle triple-A ATPase subunit6 
[Oryza sativa (japonica cultivar-group)]
 gi|113596039|dbj|BAF19913.1|  Os06g0600100 [Oryza sativa (japonica cultivar-group)]
Length=423

 Score =  110 bits (275),  Expect(2) = 8e-38
 Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 0/86 (0%)
 Frame = +3

Query  120  AKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNELNSRVRMLReelqllqeP  299
            AK  A +G+GLR YY   IH+LQL +RQ T NL+RLEAQRN LNS+V  L EEL++L EP
Sbjct  26   AKGSAFRGDGLRPYYQSRIHDLQLQIRQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEP  85

Query  300  GSYVGEVVKVMGKNKVLVKVHPEGKY  377
            GSYVGEVVKVMGK+KVLVKVHPEGKY
Sbjct  86   GSYVGEVVKVMGKSKVLVKVHPEGKY  111


 Score = 66.2 bits (160),  Expect(2) = 8e-38
 Identities = 30/36 (83%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITK++PSTRVALRNDSY+LHLILP+KVDPLVN
Sbjct  117  KSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVN  152


>gi|32400818|gb|AAP80641.1|AF475120_1  26S proteasome ATPase subunit [Triticum aestivum]
Length=287

 Score = 95.5 bits (236),  Expect(2) = 5e-34
 Identities = 55/57 (96%), Positives = 57/57 (100%), Gaps = 0/57 (0%)
 Frame = +3

Query  207  THNLNRLEAQRNELNSRVRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKY  377
            THNLNRLEAQRN+LNSRVRMLREELQLLQEPGSYVGEVVKVMGK+KVLVKVHPEGKY
Sbjct  13   THNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKY  69


 Score = 68.6 bits (166),  Expect(2) = 5e-34
 Identities = 32/36 (88%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++IDITKITPSTRVALRNDSY+LHLILP+KVDPLVN
Sbjct  75   KSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVN  110


>gi|116056475|emb|CAL52764.1|  26S proteasome regulatory complex, ATPase RPT4 (ISS) [Ostreococcus 
tauri]
Length=442

 Score = 85.9 bits (211),  Expect(2) = 1e-28
 Identities = 60/125 (48%), Positives = 67/125 (53%), Gaps = 39/125 (31%)
 Frame = +3

Query  126  SGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNELNSR----------------  257
            S A + +GLR YY   I +L++ LR KT NL RLEAQRN LN R                
Sbjct  7    SDAPRAQGLRAYYDAKIEQLEVALRDKTMNLRRLEAQRNALNGRGASWARDDAYIVRATS  66

Query  258  -----------------------VRMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPE  368
                                   +  LREEL +LQEPGSYVGEVVKVMGK KVLVKVHPE
Sbjct  67   FVGRARAMGEREGEFLGDRAERRLTSLREELHMLQEPGSYVGEVVKVMGKKKVLVKVHPE  126

Query  369  GKYCC  383
            GKY C
Sbjct  127  GKYVC  131


 Score = 60.1 bits (144),  Expect(2) = 1e-28
 Identities = 25/36 (69%), Positives = 33/36 (91%), Gaps = 0/36 (0%)
 Frame = +2

Query  395  RNIDITKITPSTRVALRNDSYVLHLILPNKVDPLVN  502
            ++ID+TK+TP TRVALRNDSY LH+ILP+ +DPLV+
Sbjct  135  KSIDVTKLTPGTRVALRNDSYTLHVILPSNIDPLVS  170


>gi|42408790|dbj|BAD10025.1|  putative MADS-box protein [Oryza sativa (japonica cultivar-group)]
 gi|42408843|dbj|BAD10102.1|  putative MADS-box protein [Oryza sativa (japonica cultivar-group)]
Length=337

 Score = 35.0 bits (79),  Expect = 0.14
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -1

Query  183  AHGCVGDSIAGG---LPPAWRRSWRCTSPPSTPVASSRYPPWP  64
            A GCV D +AGG      AWR+++ CT   ST + ++ +P  P
Sbjct  238  AVGCVDDDVAGGHAAAADAWRQAYTCTELLSTLIPTTPFPLMP  280


>gi|115477613|ref|NP_001062402.1|  Os08g0543600 [Oryza sativa (japonica cultivar-group)]
 gi|42407848|dbj|BAD08991.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|42408545|dbj|BAD09723.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113624371|dbj|BAF24316.1|  Os08g0543600 [Oryza sativa (japonica cultivar-group)]
Length=837

 Score = 32.3 bits (72),  Expect = 0.92
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 0/53 (0%)
 Frame = +3

Query  102  TEEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRNELNSRV  260
            T+E+ T +      E  R  +L+ IH+LQ +LR+K   +  LE Q       +
Sbjct  165  TKELATFRRERDNSEAERAQHLKQIHDLQEHLREKESQMLALEEQHRAAQDNI  217


>gi|115441707|ref|NP_001045133.1|  Os01g0906400 [Oryza sativa (japonica cultivar-group)]
 gi|113534664|dbj|BAF07047.1|  Os01g0906400 [Oryza sativa (japonica cultivar-group)]
Length=172

 Score = 30.4 bits (67),  Expect = 3.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
 Frame = -1

Query  147  LPPAWRRSWRCTSPPSTPVASSRYPP  70
            L   WRR  R + PPS+P +S  +PP
Sbjct  28   LDEGWRRGTRRSPPPSSPTSSPPHPP  53


>gi|6056379|gb|AAF02843.1|AC009894_14  Similar to GTP-binding protein [Arabidopsis thaliana]
Length=419

 Score = 30.0 bits (66),  Expect = 4.5
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query  75   GIERKQPASTE--EMCTAKSGAKQGEGLRQYYLQHIHEL  185
            G ++  PAS E  ++     GA QGEGL   +L HI E+
Sbjct  111  GSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREV  149


>gi|42562778|ref|NP_176001.2|  GTP binding [Arabidopsis thaliana]
Length=421

 Score = 30.0 bits (66),  Expect = 4.5
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query  75   GIERKQPASTE--EMCTAKSGAKQGEGLRQYYLQHIHEL  185
            G ++  PAS E  ++     GA QGEGL   +L HI E+
Sbjct  111  GSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREV  149


>gi|92870338|gb|ABE79655.1|  AAA ATPase; 26S proteasome subunit P45; Nucleic acid-binding, 
OB-fold [Medicago truncatula]
Length=402

 Score = 29.6 bits (65),  Expect = 5.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
 Frame = +2

Query  401  IDITKITPSTRVALRNDSYVLHLILPNKVDPLV  499
            +D  K+T  TRV L   +  +  ILP +VDP+V
Sbjct  96   VDKEKLTAGTRVVLDMTTLTIMRILPREVDPVV  128


>gi|115483300|ref|NP_001065320.1|  Os10g0550700 [Oryza sativa (japonica cultivar-group)]
 gi|110289538|gb|ABG66240.1|  hypothetical protein LOC_Os10g40324 [Oryza sativa (japonica cultivar-group)]
 gi|113639852|dbj|BAF27157.1|  Os10g0550700 [Oryza sativa (japonica cultivar-group)]
Length=1369

 Score = 29.3 bits (64),  Expect = 7.8
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = -1

Query  180   HGCVGDSIA---GGLPPAWRRSWRCTSPPSTPVASSR-YPPW  67
             HG  G S         PA   S    SPPS+P+AS R  PPW
Sbjct  1125  HGRAGPSNTTTDSAAAPATATSLAAASPPSSPLASQRSSPPW  1166


>gi|12325359|gb|AAG52618.1|AC024261_5  cinnamyl alcohol dehydrogenase, putative; 82967-79323 [Arabidopsis 
thaliana]
Length=809

 Score = 29.3 bits (64),  Expect = 7.8
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
 Frame = +3

Query  42   NFKKQDSMATVGIERKQPASTEEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLN  221
            NF KQ S+    +ER   A +EE+C  K   K  E         +H  Q  LR    N++
Sbjct  213  NFDKQASVLRRELERFDEAVSEEVC-VKGIQKMAEASFS-----VHSDQNALRNNNGNID  266

Query  222  RLEAQRNELNSRV---RMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKYC  380
             L ++   L+  V   RM +E    L  P S   + +   G     +K H E K C
Sbjct  267  TLSSKMEALSKGVLLERMEKEYGSSLVAPSSSSVQDMYCKG-----IKAHEEKKDC  317


>gi|30694961|ref|NP_849791.1|  unknown protein [Arabidopsis thaliana]
Length=487

 Score = 29.3 bits (64),  Expect = 7.8
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
 Frame = +3

Query  42   NFKKQDSMATVGIERKQPASTEEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLN  221
            NF KQ S+    +ER   A +EE+C  K   K  E         +H  Q  LR    N++
Sbjct  213  NFDKQASVLRRELERFDEAVSEEVC-VKGIQKMAEASFS-----VHSDQNALRNNNGNID  266

Query  222  RLEAQRNELNSRV---RMLReelqllqePGSYVGEVVKVMGKNKVLVKVHPEGKYC  380
             L ++   L+  V   RM +E    L  P S   + +   G     +K H E K C
Sbjct  267  TLSSKMEALSKGVLLERMEKEYGSSLVAPSSSSVQDMYCKG-----IKAHEEKKDC  317


>gi|115443627|ref|NP_001045593.1|  Os02g0101900 [Oryza sativa (japonica cultivar-group)]
 gi|41052896|dbj|BAD07808.1|  proline-rich protein-like [Oryza sativa (japonica cultivar-group)]
 gi|41053230|dbj|BAD08191.1|  proline-rich protein-like [Oryza sativa (japonica cultivar-group)]
 gi|113535124|dbj|BAF07507.1|  Os02g0101900 [Oryza sativa (japonica cultivar-group)]
Length=263

 Score = 29.3 bits (64),  Expect = 7.8
 Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
 Frame = -1

Query  162  SIAGGLPPAWRRS-------WRCTSPPSTPVASSRYPPWP  64
            S A  LPP WRR        WR T PPS PV +   PP P
Sbjct  91   SPAPPLPPLWRRRPRRLPPIWRPT-PPSLPVDTMPPPPPP  129

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 322
Number of extensions: 6
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 504
Length of database: 101054579
Length adjustment: 105
Effective length of query: 399
Effective length of database: 71302934
Effective search space: 4492084842
Effective search space used: 4492084842
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)