Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929072-11260-90713153168.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig13 Length=380
Score E Sequences producing significant alignments: (Bits) Value gi|1724100|gb|AAB38498.1| porin [Mesembryanthemum crystallinum] 150 1e-43 gi|36957183|gb|AAQ87020.1| VDAC1.2 [Lotus corniculatus var. japo 144 9e-43 gi|1172555|sp|P42055|VDAC1_SOLTU 34 kDa outer mitochondrial m... 148 1e-42 gi|67848430|gb|AAY82249.1| mitochrondrial voltage-dependent a... 144 2e-42 gi|83283993|gb|ABC01904.1| 34 kDa outer mitochondrial membran... 144 5e-40 gi|1256259|gb|AAA96275.1| voltage-dependent anion channel protei 133 1e-39 gi|1172556|sp|P42056|VDAC2_SOLTU 36 kDa outer mitochondrial m... 132 2e-38 gi|5031279|gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca] 130 6e-38 gi|629728|pir||S46959 porin I, 36K - potato >gi|515358|emb|CA... 130 6e-38 gi|92871790|gb|ABE80696.1| Porin, eukaryotic type [Medicago trun 139 1e-37 gi|625990|pir||B55017 porin, plastid - garden pea 136 4e-37 gi|36957198|gb|AAQ87021.1| VDAC1.3 [Lotus corniculatus var. japo 126 2e-36 gi|106879666|emb|CAJ42303.1| VDAC-like porin [Plantago major] 148 5e-36 gi|36957170|gb|AAQ87019.1| VDAC1.1 [Lotus corniculatus var. japo 146 2e-35 gi|1172558|sp|P42054|VDAC_PEA Outer plastidial membrane prote... 146 2e-35 gi|56693621|gb|AAW22621.1| outer mitochondrial membrane protein 117 5e-33 gi|83032228|gb|ABB97031.1| unknown [Brassica rapa] 121 2e-32 gi|21593558|gb|AAM65525.1| putative porin [Arabidopsis thaliana] 115 2e-32 gi|15232074|ref|NP_186777.1| voltage-gated ion-selective chan... 115 2e-32 gi|5929928|gb|AAD56651.1|AF178950_1 voltage-dependent anion chan 117 3e-32 gi|5929930|gb|AAD56652.1|AF178951_1 voltage-dependent anion chan 117 4e-32 gi|44894747|gb|AAS48868.1| voltage-dependent anion-selective ... 122 7e-32 gi|42601787|gb|AAS21632.1| voltage-dependent anion-selective ... 120 3e-31 gi|115478779|ref|NP_001062983.1| Os09g0361400 [Oryza sativa (... 115 3e-31 gi|3747046|gb|AAC64164.1| voltage-dependent anion-selective chan 114 1e-30 gi|1172553|sp|P46274|VDAC1_WHEAT Outer mitochondrial membrane... 110 2e-30 gi|558652|emb|CAA57646.1| Voltage dependent anion channel (VDAC) 110 9e-29 gi|21553387|gb|AAM62480.1| voltage-dependent anion-selective ... 121 8e-28 gi|15242210|ref|NP_197013.1| voltage-gated ion-selective chan... 120 1e-27 gi|115438000|ref|NP_001043433.1| Os01g0588200 [Oryza sativa (... 105 3e-27 gi|1172557|sp|P42057|VDAC_MAIZE Outer plastidial membrane pro... 108 3e-27 gi|5929932|gb|AAD56653.1|AF178952_1 voltage-dependent anion chan 109 1e-25 gi|115465125|ref|NP_001056162.1| Os05g0536200 [Oryza sativa (... 108 2e-25 gi|56693623|gb|AAW22622.1| porin-like protein [Brassica napus] 99.4 4e-24 gi|60279272|emb|CAA63968.1| pom30 [Solanum tuberosum] 102 6e-24 gi|15240765|ref|NP_201551.1| voltage-gated ion-selective chan... 100 6e-24 gi|115450603|ref|NP_001048902.1| Os03g0137500 [Oryza sativa (... 92.0 6e-24 gi|92866964|gb|ABE77437.1| Porin, eukaryotic type [Medicago trun 95.1 5e-22 gi|31249532|gb|AAP46186.1| PgPOR29 [Pennisetum glaucum] >gi|5... 94.7 8e-22 gi|77999247|gb|ABB16970.1| POM30-like protein [Solanum tuberosum 93.2 2e-21 gi|36957216|gb|AAQ87022.1| VDAC2.1 [Lotus corniculatus var. japo 90.9 5e-21 gi|15637165|gb|AAL04449.1| voltage-dependent anion channel [Beta 69.7 1e-20 gi|115451401|ref|NP_001049301.1| Os03g0202200 [Oryza sativa (... 92.0 1e-20 gi|36957233|gb|AAQ87023.1| VDAC3.1 [Lotus corniculatus var. japo 92.8 4e-20 gi|75755825|gb|ABA26972.1| TO25b-23rc [Taraxacum officinale] 94.7 8e-20 gi|15242146|ref|NP_200557.1| voltage-gated ion-selective chan... 81.3 5e-18 gi|558650|emb|CAA57647.1| Voltage dependent anion channel (VDAC) 87.8 1e-17 gi|15229642|ref|NP_190561.1| voltage-gated ion-selective chan... 84.3 1e-16 gi|92429661|gb|ABE77194.1| putative voltage-dependent ion channe 61.2 1e-13 gi|115439567|ref|NP_001044063.1| Os01g0715500 [Oryza sativa (... 67.8 1e-11 gi|57899671|dbj|BAD87377.1| putative 36kDA porin II [Oryza sa... 63.5 2e-10 gi|108706719|gb|ABF94514.1| Eukaryotic porin family protein, ... 42.4 6e-06 gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa (... 32.7 0.39 gi|112784979|gb|ABI20735.1| 11-beta-hydroxysteroid dehydrogenase 31.2 1.1 gi|108773317|ref|YP_635872.1| beta'' subunit of RNA polymeras... 28.5 7.3 gi|68164961|gb|AAY87450.1| cinnamic acid hydroxylase [Malus x do 28.5 7.3 gi|116310300|emb|CAH67318.1| OSIGBa0106G07.14 [Oryza sativa (ind 28.1 9.5 gi|115458960|ref|NP_001053080.1| Os04g0476500 [Oryza sativa (... 28.1 9.5 gi|1518113|gb|AAB49423.1| SLL2 28.1 9.5 gi|77403731|dbj|BAE46444.1| acetyl-CoA carboxylase beta subunit 28.1 9.5 gi|4760710|dbj|BAA77395.1| SLL2-S9-protein [Brassica rapa] 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 284 Number of extensions: 8 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 380 Length of database: 101054579 Length adjustment: 93 Effective length of query: 287 Effective length of database: 74703122 Effective search space: 2465203026 Effective search space used: 2465203026 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)